RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 RNASEK-C17orf49H0YIS7 233 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 C15orf65H3BRN8 121 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 ABCD4O14678 606 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 WNT9BO14905 357 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 RAB29O14966 203 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 TXNL1O43396 289 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 KCNAB3O43448 404 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 CHST1O43916 411 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 PRH1P02810 166 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 CD3EP07766 207 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 P0C879 139 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 IRF2P14316 349 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 CD40P25942 277 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 PAX6P26367 422 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 TAGLN2P37802 199 aaKnown RBP4.63□□□□□ -1.67
PCF11-205ENST00000530906 SNCAP37840 140 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 RPP30P78346 268 aaKnown RBP4.63□□□□□ -1.67
PCF11-205ENST00000530906 DEFA5Q01523 94 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 NHLH2Q02577 135 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 AESQ08117 197 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 PMS2P11Q13670 270 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 ZNF273Q14593 569 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 ZNF585BQ52M93 769 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 CXorf66Q5JRM2 361 aaPredicted RBP4.63□□□□□ -1.67
PCF11-205ENST00000530906 PRAMEF6Q5VXH4 476 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 ZNF826PQ6ZT77 177 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 DOLPP1Q86YN1 238 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 C1orf87Q8N0U7 546 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 PUSL1Q8N0Z8 303 aaKnown RBP4.63□□□□□ -1.67
PCF11-205ENST00000530906 OR5C1Q8NGR4 320 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 OR1L1Q8NH94 360 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 SCGB1C1Q8TD33 95 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 PINX1Q96BK5 328 aaKnown RBP4.63□□□□□ -1.67
PCF11-205ENST00000530906 GPR146Q96CH1 333 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 OR2V2Q96R30 315 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 AIFM2Q9BRQ8 373 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 C1QTNF6Q9BXI9 259 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 KRTAP3-1Q9BYR8 98 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 MRPL37Q9BZE1 423 aaKnown RBP4.63□□□□□ -1.67
PCF11-205ENST00000530906 EGLN1Q9GZT9 426 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 OR2D2Q9H210 308 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 HRH4Q9H3N8 390 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 TREM1Q9NP99 234 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.63□□□□□ -1.67
PCF11-205ENST00000530906 C19orf12Q9NSK7 152 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 KIAA1456Q9P272 454 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 CACNG5Q9UF02 275 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 PRELID3BQ9Y3B1 194 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 MSRB2Q9Y3D2 182 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 TIMM9Q9Y5J7 89 aa4.63□□□□□ -1.67
PCF11-205ENST00000530906 CUL9Q8IWT3 2517 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 TRGV10A0A0A0MS01 117 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 FAM24AA6NFZ4 105 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 NKX6-3A6NJ46 265 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 ZNF729A6NN14 1252 aaPredicted RBP4.62□□□□□ -1.67
PCF11-205ENST00000530906 ATP6V1G2-DDX39BF2Z307 99 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 ZNHIT1O43257 154 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 PPIHO43447 177 aaKnown RBP4.62□□□□□ -1.67
PCF11-205ENST00000530906 TNFSF12O43508 249 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 WISP2O76076 250 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 FSTL3O95633 263 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 CLDN1O95832 211 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 HPRT1P00492 218 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 IGKV1-39P01597 117 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 IGKV1-5P01602 117 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 MBP02144 154 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 IGKV1D-39P04432 117 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 CGB3P0DN86 165 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 CGB7P0DN87 165 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 ATP6V0CP27449 155 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 GPR12P47775 334 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 GLIPR1P48060 266 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 DYNLT3P51808 116 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 CASP6P55212 293 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 PAX9P55771 341 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 ATP5IP56385 69 aaPredicted RBP4.62□□□□□ -1.67
PCF11-205ENST00000530906 TMPRSS3P57727 454 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 TNFAIP6P98066 277 aaPredicted RBP4.62□□□□□ -1.67
PCF11-205ENST00000530906 MEF2CQ06413 473 aaPredicted RBP4.62□□□□□ -1.67
PCF11-205ENST00000530906 TNFRSF9Q07011 255 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 ZNF616Q08AN1 781 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 TBR1Q16650 682 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 PDLIM3Q53GG5 364 aaPredicted RBP4.62□□□□□ -1.67
PCF11-205ENST00000530906 AKR1C8PQ5T2L2 129 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 TEX36Q5VZQ5 186 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 STUMQ69YW2 141 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 GFRALQ6UXV0 394 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 ASCL5Q7RTU5 278 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 H2BFWTQ7Z2G1 175 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 CENPVQ7Z7K6 275 aaPredicted RBP4.62□□□□□ -1.67
PCF11-205ENST00000530906 FGFRL1Q8N441 504 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 PRR18Q8N4B5 295 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 CD177Q8N6Q3 437 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 HSD17B11Q8NBQ5 300 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 OR10G4Q8NGN3 311 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 OR13A1Q8NGR1 328 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 OR2G3Q8NGZ4 309 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 OR52E5Q8NH55 327 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 MRGPRDQ8TDS7 321 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 TCTEX1D2Q8WW35 142 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms