RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 THBS3P49746 956 aa25.92■■□□□ 1.74
SSSCA1-205ENST00000527920 ZNF695Q8IW36 515 aa25.92■■□□□ 1.74
SSSCA1-205ENST00000527920 ATG5Q9H1Y0 275 aa25.92■■□□□ 1.74
SSSCA1-205ENST00000527920 OR51E2Q9H255 320 aa25.92■■□□□ 1.74
SSSCA1-205ENST00000527920 NECAP2Q9NVZ3 263 aa25.92■■□□□ 1.74
SSSCA1-205ENST00000527920 TRBV6-7A0A0A0MS04 114 aa25.91■■□□□ 1.74
SSSCA1-205ENST00000527920 SMIM30A4D0T7 59 aa25.91■■□□□ 1.74
SSSCA1-205ENST00000527920 NUDT19A8MXV4 375 aa25.91■■□□□ 1.74
SSSCA1-205ENST00000527920 PROP1O75360 226 aa25.91■■□□□ 1.74
SSSCA1-205ENST00000527920 SCGNO76038 276 aa25.91■■□□□ 1.74
SSSCA1-205ENST00000527920 IGLL1P15814 213 aa25.91■■□□□ 1.74
SSSCA1-205ENST00000527920 LIN54Q6MZP7 749 aa25.91■■□□□ 1.74
SSSCA1-205ENST00000527920 KLHL30-AS1Q8NEE0 82 aa25.91■■□□□ 1.74
SSSCA1-205ENST00000527920 OR51J1Q9H342 316 aa25.91■■□□□ 1.74
SSSCA1-205ENST00000527920 MYCNOSP40205 109 aa25.9■■□□□ 1.74
SSSCA1-205ENST00000527920 SFXN4Q6P4A7 337 aa25.9■■□□□ 1.74
SSSCA1-205ENST00000527920 C8orf86Q6ZUL3 223 aa25.9■■□□□ 1.74
SSSCA1-205ENST00000527920 MRPL41Q8IXM3 137 aaKnown RBP25.9■■□□□ 1.74
SSSCA1-205ENST00000527920 DAPK2Q9UIK4 370 aa25.9■■□□□ 1.74
SSSCA1-205ENST00000527920 A0A075B6Q4 140 aa25.89■■□□□ 1.74
SSSCA1-205ENST00000527920 IGHV7-81A0A0B4J1V7 117 aa25.89■■□□□ 1.74
SSSCA1-205ENST00000527920 RPLP1P05386 114 aaKnown RBP25.89■■□□□ 1.74
SSSCA1-205ENST00000527920 DTYMKP23919 212 aa25.89■■□□□ 1.74
SSSCA1-205ENST00000527920 CDX1P47902 265 aaPredicted RBP25.89■■□□□ 1.74
SSSCA1-205ENST00000527920 SCAND1P57086 179 aa25.89■■□□□ 1.74
SSSCA1-205ENST00000527920 ARFRP1Q13795 201 aa25.89■■□□□ 1.74
SSSCA1-205ENST00000527920 GLDNQ6ZMI3 551 aaPredicted RBP25.89■■□□□ 1.74
SSSCA1-205ENST00000527920 C18orf65Q6ZTR6 163 aa25.89■■□□□ 1.74
SSSCA1-205ENST00000527920 OR10J5Q8NHC4 309 aa25.89■■□□□ 1.74
SSSCA1-205ENST00000527920 P2RX4Q99571 388 aa25.89■■□□□ 1.74
SSSCA1-205ENST00000527920 RNF150Q9ULK6 438 aa25.89■■□□□ 1.74
SSSCA1-205ENST00000527920 GAB2Q9UQC2 676 aa25.89■■□□□ 1.74
SSSCA1-205ENST00000527920 RRHO14718 337 aa25.88■■□□□ 1.73
SSSCA1-205ENST00000527920 GSTT2P0CG29 244 aa25.88■■□□□ 1.73
SSSCA1-205ENST00000527920 GSTT2BP0CG30 244 aa25.88■■□□□ 1.73
SSSCA1-205ENST00000527920 PSMB8P28062 276 aa25.88■■□□□ 1.73
SSSCA1-205ENST00000527920 SDC2P34741 201 aa25.88■■□□□ 1.73
SSSCA1-205ENST00000527920 TALDO1P37837 337 aa25.88■■□□□ 1.73
SSSCA1-205ENST00000527920 IGSF11Q5DX21 431 aa25.88■■□□□ 1.73
SSSCA1-205ENST00000527920 H7C2Y5 167 aa25.87■■□□□ 1.73
SSSCA1-205ENST00000527920 BET1O15155 118 aa25.87■■□□□ 1.73
SSSCA1-205ENST00000527920 TFAP2AP05549 437 aa25.87■■□□□ 1.73
SSSCA1-205ENST00000527920 GSTP1P09211 210 aaKnown RBP25.87■■□□□ 1.73
SSSCA1-205ENST00000527920 NEDD8Q15843 81 aa25.87■■□□□ 1.73
SSSCA1-205ENST00000527920 FOXB2Q5VYV0 432 aa25.87■■□□□ 1.73
SSSCA1-205ENST00000527920 GPR61Q9BZJ8 451 aa25.87■■□□□ 1.73
SSSCA1-205ENST00000527920 ZNF230Q9UIE0 474 aaPredicted RBP25.87■■□□□ 1.73
SSSCA1-205ENST00000527920 ATP6V0E1O15342 81 aa25.86■■□□□ 1.73
SSSCA1-205ENST00000527920 CD36P16671 472 aa25.86■■□□□ 1.73
SSSCA1-205ENST00000527920 PPIFP30405 207 aaKnown RBP25.86■■□□□ 1.73
SSSCA1-205ENST00000527920 CRIP2P52943 208 aaPredicted RBP25.86■■□□□ 1.73
SSSCA1-205ENST00000527920 ZNF660Q6AZW8 331 aaPredicted RBP25.86■■□□□ 1.73
SSSCA1-205ENST00000527920 ZNF383Q8NA42 475 aa25.86■■□□□ 1.73
SSSCA1-205ENST00000527920 MYOZ3Q8TDC0 251 aa25.86■■□□□ 1.73
SSSCA1-205ENST00000527920 SPDEFO95238 335 aa25.85■■□□□ 1.73
SSSCA1-205ENST00000527920 CDNFQ49AH0 187 aa25.85■■□□□ 1.73
SSSCA1-205ENST00000527920 HACD4Q5VWC8 232 aa25.85■■□□□ 1.73
SSSCA1-205ENST00000527920 PDPNQ86YL7 162 aa25.85■■□□□ 1.73
SSSCA1-205ENST00000527920 PARP11Q9NR21 331 aa25.85■■□□□ 1.73
SSSCA1-205ENST00000527920 APOA2P02652 100 aa25.84■■□□□ 1.73
SSSCA1-205ENST00000527920 SNRPBP14678 240 aaKnown RBP25.84■■□□□ 1.73
SSSCA1-205ENST00000527920 DRAXINQ8NBI3 349 aaPredicted RBP25.84■■□□□ 1.73
SSSCA1-205ENST00000527920 OR8U1Q8NH10 309 aa25.84■■□□□ 1.73
SSSCA1-205ENST00000527920 LGALS14Q8TCE9 139 aa25.84■■□□□ 1.73
SSSCA1-205ENST00000527920 MAFIPQ8WZ33 124 aa25.84■■□□□ 1.73
SSSCA1-205ENST00000527920 DCSTAMPQ9H295 470 aa25.84■■□□□ 1.73
SSSCA1-205ENST00000527920 FBXL15Q9H469 300 aa25.84■■□□□ 1.73
SSSCA1-205ENST00000527920 LOC100506127A0A0U1RQW1 187 aa25.83■■□□□ 1.73
SSSCA1-205ENST00000527920 TMEM127O75204 238 aa25.83■■□□□ 1.73
SSSCA1-205ENST00000527920 PRB2P02812 416 aaPredicted RBP25.83■■□□□ 1.73
SSSCA1-205ENST00000527920 OR8U9P0C7N5 309 aa25.83■■□□□ 1.73
SSSCA1-205ENST00000527920 PITPNAQ00169 270 aa25.83■■□□□ 1.73
SSSCA1-205ENST00000527920 LCNL1Q6ZST4 164 aa25.83■■□□□ 1.73
SSSCA1-205ENST00000527920 RAX2Q96IS3 184 aa25.83■■□□□ 1.73
SSSCA1-205ENST00000527920 TSNAXQ99598 290 aaKnown RBP25.83■■□□□ 1.73
SSSCA1-205ENST00000527920 MCRIP2Q9BUT9 160 aaKnown RBP25.83■■□□□ 1.73
SSSCA1-205ENST00000527920 ETV7Q9Y603 341 aa25.83■■□□□ 1.73
SSSCA1-205ENST00000527920 TRAV41A0A0B4J266 112 aa25.82■■□□□ 1.72
SSSCA1-205ENST00000527920 M0R1X1 148 aa25.82■■□□□ 1.72
SSSCA1-205ENST00000527920 CCL24O00175 119 aa25.82■■□□□ 1.72
SSSCA1-205ENST00000527920 IGLV1-40P01703 118 aa25.82■■□□□ 1.72
SSSCA1-205ENST00000527920 IGKV1-16P04430 117 aa25.82■■□□□ 1.72
SSSCA1-205ENST00000527920 CX3CL1P78423 397 aa25.82■■□□□ 1.72
SSSCA1-205ENST00000527920 PLGLAQ15195 96 aa25.82■■□□□ 1.72
SSSCA1-205ENST00000527920 TIMM50Q3ZCQ8 353 aa25.82■■□□□ 1.72
SSSCA1-205ENST00000527920 MINDY2Q8NBR6 621 aa25.82■■□□□ 1.72
SSSCA1-205ENST00000527920 C4orf3Q8WVX3 66 aa25.82■■□□□ 1.72
SSSCA1-205ENST00000527920 GINS4Q9BRT9 223 aa25.82■■□□□ 1.72
SSSCA1-205ENST00000527920 OR2D2Q9H210 308 aa25.82■■□□□ 1.72
SSSCA1-205ENST00000527920 AURKAIP1Q9NWT8 199 aaPredicted RBP25.82■■□□□ 1.72
SSSCA1-205ENST00000527920 RHBDL2Q9NX52 303 aa25.82■■□□□ 1.72
SSSCA1-205ENST00000527920 ELF5Q9UKW6 265 aaPredicted RBP25.82■■□□□ 1.72
SSSCA1-205ENST00000527920 WSB1Q9Y6I7 421 aa25.82■■□□□ 1.72
SSSCA1-205ENST00000527920 G3V318 75 aa25.81■■□□□ 1.72
SSSCA1-205ENST00000527920 NDPQ00604 133 aa25.81■■□□□ 1.72
SSSCA1-205ENST00000527920 TAGLNQ01995 201 aaKnown RBP25.81■■□□□ 1.72
SSSCA1-205ENST00000527920 MXD1Q05195 221 aa25.81■■□□□ 1.72
SSSCA1-205ENST00000527920 C19orf54Q5BKX5 351 aa25.81■■□□□ 1.72
SSSCA1-205ENST00000527920 TCTEX1D1Q8N7M0 179 aa25.81■■□□□ 1.72
SSSCA1-205ENST00000527920 RNF167Q9H6Y7 350 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms