RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 ETV3LQ6ZN32 361 aa8.79□□□□□ -1
TRAPPC4-204ENST00000524797 C18orf65Q6ZTR6 163 aa8.79□□□□□ -1
TRAPPC4-204ENST00000524797 MFSD4AQ8N468 514 aa8.79□□□□□ -1
TRAPPC4-204ENST00000524797 OR56B1Q8NGI3 324 aa8.79□□□□□ -1
TRAPPC4-204ENST00000524797 OR6Q1Q8NGQ2 317 aa8.79□□□□□ -1
TRAPPC4-204ENST00000524797 HSPB9Q9BQS6 159 aa8.79□□□□□ -1
TRAPPC4-204ENST00000524797 Q9N2K0 584 aa8.79□□□□□ -1
TRAPPC4-204ENST00000524797 SLC23A1Q9UHI7 598 aa8.79□□□□□ -1
TRAPPC4-204ENST00000524797 RAB22AQ9UL26 194 aa8.79□□□□□ -1
TRAPPC4-204ENST00000524797 MGAT4AQ9UM21 535 aa8.79□□□□□ -1
TRAPPC4-204ENST00000524797 ITGB1BP1O14713 200 aa8.78□□□□□ -1
TRAPPC4-204ENST00000524797 GABARAPO95166 117 aa8.78□□□□□ -1
TRAPPC4-204ENST00000524797 IGLL1P15814 213 aa8.78□□□□□ -1
TRAPPC4-204ENST00000524797 MYL9P24844 172 aa8.78□□□□□ -1
TRAPPC4-204ENST00000524797 CD40LGP29965 261 aa8.78□□□□□ -1
TRAPPC4-204ENST00000524797 PPP5CP53041 499 aa8.78□□□□□ -1
TRAPPC4-204ENST00000524797 PRKDCP78527 4128 aaKnown RBP8.78□□□□□ -1
TRAPPC4-204ENST00000524797 CTF1Q16619 201 aa8.78□□□□□ -1
TRAPPC4-204ENST00000524797 PLAC9Q5JTB6 97 aa8.78□□□□□ -1
TRAPPC4-204ENST00000524797 UBE2UQ5VVX9 321 aa8.78□□□□□ -1
TRAPPC4-204ENST00000524797 DNAH3Q8TD57 4116 aa8.78□□□□□ -1
TRAPPC4-204ENST00000524797 CMSS1Q9BQ75 279 aaKnown RBP8.78□□□□□ -1
TRAPPC4-204ENST00000524797 ZNF251Q9BRH9 671 aa8.78□□□□□ -1
TRAPPC4-204ENST00000524797 PARP12Q9H0J9 701 aaKnown RBP8.78□□□□□ -1
TRAPPC4-204ENST00000524797 ZFP57Q9NU63 452 aa8.78□□□□□ -1
TRAPPC4-204ENST00000524797 OR1A1Q9P1Q5 309 aa8.78□□□□□ -1
TRAPPC4-204ENST00000524797 NOTCH3Q9UM47 2321 aa8.78□□□□□ -1
TRAPPC4-204ENST00000524797 GALP22466 123 aa8.78□□□□□ -1
TRAPPC4-204ENST00000524797 CNTFRP26992 372 aa8.78□□□□□ -1
TRAPPC4-204ENST00000524797 PNLIPRP3Q17RR3 467 aa8.78□□□□□ -1
TRAPPC4-204ENST00000524797 LINC00482Q8N8I6 264 aa8.78□□□□□ -1
TRAPPC4-204ENST00000524797 CHAC2Q8WUX2 184 aa8.78□□□□□ -1
TRAPPC4-204ENST00000524797 RITA1Q96K30 269 aa8.78□□□□□ -1
TRAPPC4-204ENST00000524797 AIFM2Q9BRQ8 373 aa8.78□□□□□ -1
TRAPPC4-204ENST00000524797 C12orf4Q9NQ89 552 aa8.78□□□□□ -1
TRAPPC4-204ENST00000524797 NECAP2Q9NVZ3 263 aa8.78□□□□□ -1
TRAPPC4-204ENST00000524797 PIPOXQ9P0Z9 390 aa8.78□□□□□ -1
TRAPPC4-204ENST00000524797 IFITM5A6NNB3 132 aa8.77□□□□□ -1.01
TRAPPC4-204ENST00000524797 NUDT19A8MXV4 375 aa8.77□□□□□ -1.01
TRAPPC4-204ENST00000524797 RAB29O14966 203 aa8.77□□□□□ -1.01
TRAPPC4-204ENST00000524797 SCTP09683 121 aa8.77□□□□□ -1.01
TRAPPC4-204ENST00000524797 RAB3BP20337 219 aa8.77□□□□□ -1.01
TRAPPC4-204ENST00000524797 SOX6P35712 828 aa8.77□□□□□ -1.01
TRAPPC4-204ENST00000524797 ACTBP60709 375 aa8.77□□□□□ -1.01
TRAPPC4-204ENST00000524797 CFHR3Q02985 330 aa8.77□□□□□ -1.01
TRAPPC4-204ENST00000524797 MMDQ15546 238 aa8.77□□□□□ -1.01
TRAPPC4-204ENST00000524797 MOGAT2Q3SYC2 334 aa8.77□□□□□ -1.01
TRAPPC4-204ENST00000524797 RPL39P5Q59GN2 51 aa8.77□□□□□ -1.01
TRAPPC4-204ENST00000524797 C22orf42Q6IC83 251 aa8.77□□□□□ -1.01
TRAPPC4-204ENST00000524797 TEX38Q6PEX7 206 aa8.77□□□□□ -1.01
TRAPPC4-204ENST00000524797 REC114Q7Z4M0 266 aa8.77□□□□□ -1.01
TRAPPC4-204ENST00000524797 GON7Q9BXV9 100 aa8.77□□□□□ -1.01
TRAPPC4-204ENST00000524797 C11orf54Q9H0W9 315 aaPredicted RBP8.77□□□□□ -1.01
TRAPPC4-204ENST00000524797 ZNF107Q9UII5 783 aaPredicted RBP8.77□□□□□ -1.01
TRAPPC4-204ENST00000524797 ZNF580Q9UK33 172 aa8.77□□□□□ -1.01
TRAPPC4-204ENST00000524797 TGP01266 2768 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 IGKV1-6A0A0C4DH72 117 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 TRDCB7Z8K6 153 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 UPK1BO75841 260 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 RAB6AP20340 208 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 PSMB9P28065 219 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 SLC6A1P30531 599 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 CEACAM6P40199 344 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 THBS3P49746 956 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 FOXE3Q13461 319 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 FAM131AQ6UXB0 335 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 C8orf86Q6ZUL3 223 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 SLC51BQ86UW2 128 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 SNX29P2Q8IUI4 249 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 MRPL41Q8IXM3 137 aaKnown RBP8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 KLHL30-AS1Q8NEE0 82 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 NPBQ8NG41 125 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 EDARADDQ8WWZ3 215 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 FCGR1BQ92637 280 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 RCC1LQ96I51 464 aaKnown RBP8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 ABHD14BQ96IU4 210 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 AURKAIP1Q9NWT8 199 aaPredicted RBP8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 KCNK7Q9Y2U2 307 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 NBR2O15453 112 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 HSPA12AO43301 675 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 PTTG1O95997 202 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 IGF1P05019 195 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 RPLP1P05386 114 aaKnown RBP8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 CD3GP09693 182 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 CT45A6P0DMU7 189 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 CT45A5P0DMU8 189 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 CT45A7P0DMV0 189 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 SLC2A2P11168 524 aaPredicted RBP8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 CTRB1P17538 263 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 ZBTB25P24278 435 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 MYCNOSP40205 109 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 CXorf66Q5JRM2 361 aaPredicted RBP8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 CTRB2Q6GPI1 263 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 GLDNQ6ZMI3 551 aaPredicted RBP8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 NR2C2APQ86WQ0 139 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 ZNF695Q8IW36 515 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 RNF152Q8N8N0 203 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 OR10R2Q8NGX6 335 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 PTX4Q96A99 478 aa8.76□□□□□ -1.01
TRAPPC4-204ENST00000524797 RAB3CQ96E17 227 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms