RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 TGOLN2O43493 480 aa1.96□□□□□ -2.1
PTPN12-213ENST00000519553 SSNA1O43805 119 aa1.96□□□□□ -2.1
PTPN12-213ENST00000519553 NSA2O95478 260 aaKnown RBP1.96□□□□□ -2.1
PTPN12-213ENST00000519553 IFNA6P05013 189 aa1.96□□□□□ -2.1
PTPN12-213ENST00000519553 ISG15P05161 165 aa1.96□□□□□ -2.1
PTPN12-213ENST00000519553 UGT2B7P16662 529 aa1.96□□□□□ -2.1
PTPN12-213ENST00000519553 AKR1C4P17516 323 aa1.96□□□□□ -2.1
PTPN12-213ENST00000519553 ERVS71-1P61550 626 aa1.96□□□□□ -2.1
PTPN12-213ENST00000519553 CCL7P80098 99 aa1.96□□□□□ -2.1
PTPN12-213ENST00000519553 BASP1P80723 227 aaKnown RBP1.96□□□□□ -2.1
PTPN12-213ENST00000519553 C4orf26Q17RF5 130 aa1.96□□□□□ -2.1
PTPN12-213ENST00000519553 HLA-DRB5Q30154 266 aa1.96□□□□□ -2.1
PTPN12-213ENST00000519553 LPCAT4Q643R3 524 aa1.96□□□□□ -2.1
PTPN12-213ENST00000519553 CD200R1LQ6Q8B3 271 aa1.96□□□□□ -2.1
PTPN12-213ENST00000519553 LRRN1Q6UXK5 716 aa1.96□□□□□ -2.1
PTPN12-213ENST00000519553 MUC15Q8N387 334 aa1.96□□□□□ -2.1
PTPN12-213ENST00000519553 OR5D18Q8NGL1 313 aa1.96□□□□□ -2.1
PTPN12-213ENST00000519553 OR11L1Q8NGX0 322 aa1.96□□□□□ -2.1
PTPN12-213ENST00000519553 PIGXQ8TBF5 258 aa1.96□□□□□ -2.1
PTPN12-213ENST00000519553 DHRS9Q9BPW9 319 aa1.96□□□□□ -2.1
PTPN12-213ENST00000519553 C9orf16Q9BUW7 83 aa1.96□□□□□ -2.1
PTPN12-213ENST00000519553 KRTAP4-1Q9BYQ7 146 aa1.96□□□□□ -2.1
PTPN12-213ENST00000519553 OR51V1Q9H2C8 321 aa1.96□□□□□ -2.1
PTPN12-213ENST00000519553 METTL17Q9H7H0 456 aaPredicted RBP1.96□□□□□ -2.1
PTPN12-213ENST00000519553 FGFR1OP2Q9NVK5 253 aa1.96□□□□□ -2.1
PTPN12-213ENST00000519553 C3orf18Q9UK00 162 aa1.96□□□□□ -2.1
PTPN12-213ENST00000519553 MINOS1-NBL1R4GNA1 71 aa1.96□□□□□ -2.1
PTPN12-213ENST00000519553 COL4A2P08572 1712 aa1.96□□□□□ -2.1
PTPN12-213ENST00000519553 ATG2BQ96BY7 2078 aa1.95□□□□□ -2.1
PTPN12-213ENST00000519553 ADGRL3Q9HAR2 1447 aa1.95□□□□□ -2.1
PTPN12-213ENST00000519553 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.95□□□□□ -2.1
PTPN12-213ENST00000519553 A0A1W2PQL4 384 aaPredicted RBP1.95□□□□□ -2.1
PTPN12-213ENST00000519553 EFCAB9A8MZ26 197 aa1.95□□□□□ -2.1
PTPN12-213ENST00000519553 GABRA3P34903 492 aa1.95□□□□□ -2.1
PTPN12-213ENST00000519553 IFNGR2P38484 337 aa1.95□□□□□ -2.1
PTPN12-213ENST00000519553 RAP1GDS1P52306 607 aa1.95□□□□□ -2.1
PTPN12-213ENST00000519553 AP2S1P53680 142 aaPredicted RBP1.95□□□□□ -2.1
PTPN12-213ENST00000519553 AP3S2P59780 193 aa1.95□□□□□ -2.1
PTPN12-213ENST00000519553 REEP5Q00765 189 aa1.95□□□□□ -2.1
PTPN12-213ENST00000519553 BSPH1Q075Z2 132 aa1.95□□□□□ -2.1
PTPN12-213ENST00000519553 PDGFRLQ15198 375 aa1.95□□□□□ -2.1
PTPN12-213ENST00000519553 AKIRIN2Q53H80 203 aa1.95□□□□□ -2.1
PTPN12-213ENST00000519553 TTC33Q6PID6 262 aaPredicted RBP1.95□□□□□ -2.1
PTPN12-213ENST00000519553 MTERF4Q7Z6M4 381 aaKnown RBP1.95□□□□□ -2.1
PTPN12-213ENST00000519553 RIBC1Q8N443 379 aaPredicted RBP1.95□□□□□ -2.1
PTPN12-213ENST00000519553 CCDC112Q8NEF3 446 aa1.95□□□□□ -2.1
PTPN12-213ENST00000519553 HAVCR2Q8TDQ0 301 aa1.95□□□□□ -2.1
PTPN12-213ENST00000519553 SMIM12Q96EX1 92 aa1.95□□□□□ -2.1
PTPN12-213ENST00000519553 PACRGQ96M98 296 aaPredicted RBP1.95□□□□□ -2.1
PTPN12-213ENST00000519553 PRAP1Q96NZ9 151 aa1.95□□□□□ -2.1
PTPN12-213ENST00000519553 METTL9Q9H1A3 318 aa1.95□□□□□ -2.1
PTPN12-213ENST00000519553 GUCA1BQ9UMX6 200 aa1.95□□□□□ -2.1
PTPN12-213ENST00000519553 A0A1W2PP64 1363 aa1.95□□□□□ -2.1
PTPN12-213ENST00000519553 DAPL1A0PJW8 107 aa1.94□□□□□ -2.1
PTPN12-213ENST00000519553 TMEM114B3SHH9 223 aa1.94□□□□□ -2.1
PTPN12-213ENST00000519553 PFDN6O15212 129 aa1.94□□□□□ -2.1
PTPN12-213ENST00000519553 ACOX3O15254 700 aa1.94□□□□□ -2.1
PTPN12-213ENST00000519553 STX10O60499 249 aa1.94□□□□□ -2.1
PTPN12-213ENST00000519553 OR5F1O95221 314 aa1.94□□□□□ -2.1
PTPN12-213ENST00000519553 ATF1P18846 271 aa1.94□□□□□ -2.1
PTPN12-213ENST00000519553 GRPRP30550 384 aa1.94□□□□□ -2.1
PTPN12-213ENST00000519553 PSMD7P51665 324 aa1.94□□□□□ -2.1
PTPN12-213ENST00000519553 LSM6P62312 80 aaKnown RBP1.94□□□□□ -2.1
PTPN12-213ENST00000519553 DEFA6Q01524 100 aa1.94□□□□□ -2.1
PTPN12-213ENST00000519553 SKP2Q13309 424 aa1.94□□□□□ -2.1
PTPN12-213ENST00000519553 PDK2Q15119 407 aa1.94□□□□□ -2.1
PTPN12-213ENST00000519553 DNAL1Q4LDG9 190 aa1.94□□□□□ -2.1
PTPN12-213ENST00000519553 ACSM3Q53FZ2 586 aa1.94□□□□□ -2.1
PTPN12-213ENST00000519553 OR1M1Q8NGA1 313 aa1.94□□□□□ -2.1
PTPN12-213ENST00000519553 OR4P4Q8NGL7 312 aa1.94□□□□□ -2.1
PTPN12-213ENST00000519553 OPTNQ96CV9 577 aa1.94□□□□□ -2.1
PTPN12-213ENST00000519553 C1QTNF6Q9BXI9 259 aa1.94□□□□□ -2.1
PTPN12-213ENST00000519553 CDCA4Q9BXL8 241 aa1.94□□□□□ -2.1
PTPN12-213ENST00000519553 MRPS26Q9BYN8 205 aaKnown RBP1.94□□□□□ -2.1
PTPN12-213ENST00000519553 MS4A6AQ9H2W1 248 aa1.94□□□□□ -2.1
PTPN12-213ENST00000519553 C16orf95Q9H693 158 aa1.94□□□□□ -2.1
PTPN12-213ENST00000519553 C11orf49Q9H6J7 331 aa1.94□□□□□ -2.1
PTPN12-213ENST00000519553 FAM206AQ9NX38 181 aa1.94□□□□□ -2.1
PTPN12-213ENST00000519553 SNX10Q9Y5X0 201 aa1.94□□□□□ -2.1
PTPN12-213ENST00000519553 MPDZO75970 2070 aa1.94□□□□□ -2.1
PTPN12-213ENST00000519553 STRCP1A6NGW2 1772 aa1.93□□□□□ -2.1
PTPN12-213ENST00000519553 MUC21A0A0G2JKD1 596 aa1.93□□□□□ -2.1
PTPN12-213ENST00000519553 MUC21A0A140T8X8 626 aa1.93□□□□□ -2.1
PTPN12-213ENST00000519553 DCTN3O75935 186 aa1.93□□□□□ -2.1
PTPN12-213ENST00000519553 TCRBP04435 133 aa1.93□□□□□ -2.1
PTPN12-213ENST00000519553 TYMSP04818 313 aa1.93□□□□□ -2.1
PTPN12-213ENST00000519553 CALB1P05937 261 aa1.93□□□□□ -2.1
PTPN12-213ENST00000519553 HSD11B1P28845 292 aa1.93□□□□□ -2.1
PTPN12-213ENST00000519553 SLCO1A2P46721 670 aa1.93□□□□□ -2.1
PTPN12-213ENST00000519553 CAPZBP47756 277 aa1.93□□□□□ -2.1
PTPN12-213ENST00000519553 B2MP61769 119 aa1.93□□□□□ -2.1
PTPN12-213ENST00000519553 ARF6P62330 175 aa1.93□□□□□ -2.1
PTPN12-213ENST00000519553 MRPS25P82663 173 aaKnown RBP1.93□□□□□ -2.1
PTPN12-213ENST00000519553 ZNF117Q03924 483 aa1.93□□□□□ -2.1
PTPN12-213ENST00000519553 PAFAH1B3Q15102 231 aaKnown RBP1.93□□□□□ -2.1
PTPN12-213ENST00000519553 HENMT1Q5T8I9 393 aaKnown RBP1.93□□□□□ -2.1
PTPN12-213ENST00000519553 CST9Q5W186 159 aa1.93□□□□□ -2.1
PTPN12-213ENST00000519553 SPOPLQ6IQ16 392 aa1.93□□□□□ -2.1
PTPN12-213ENST00000519553 FAM173BQ6P4H8 233 aa1.93□□□□□ -2.1
PTPN12-213ENST00000519553 YIPF7Q8N8F6 280 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms