RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 C2orf72A6NCS6 295 aa10.87□□□□□ -0.67
SMAD1-215ENST00000515385 HMGB3O15347 200 aaKnown RBP10.87□□□□□ -0.67
SMAD1-215ENST00000515385 GALR2O43603 387 aaPredicted RBP10.87□□□□□ -0.67
SMAD1-215ENST00000515385 NDUFB4O95168 129 aa10.87□□□□□ -0.67
SMAD1-215ENST00000515385 SCGB1A1P11684 91 aa10.87□□□□□ -0.67
SMAD1-215ENST00000515385 CRYGSP22914 178 aa10.87□□□□□ -0.67
SMAD1-215ENST00000515385 S100A7P31151 101 aa10.87□□□□□ -0.67
SMAD1-215ENST00000515385 HINT1P49773 126 aaPredicted RBP10.87□□□□□ -0.67
SMAD1-215ENST00000515385 CLDN17P56750 224 aa10.87□□□□□ -0.67
SMAD1-215ENST00000515385 SMIM21Q3B7S5 101 aa10.87□□□□□ -0.67
SMAD1-215ENST00000515385 PRAMEF20Q5VT98 475 aa10.87□□□□□ -0.67
SMAD1-215ENST00000515385 C1orf122Q6ZSJ8 110 aa10.87□□□□□ -0.67
SMAD1-215ENST00000515385 YAF2Q8IY57 180 aa10.87□□□□□ -0.67
SMAD1-215ENST00000515385 ZIC4Q8N9L1 334 aa10.87□□□□□ -0.67
SMAD1-215ENST00000515385 RNF138Q8WVD3 245 aa10.87□□□□□ -0.67
SMAD1-215ENST00000515385 KLHDC7BQ96G42 594 aa10.87□□□□□ -0.67
SMAD1-215ENST00000515385 GPHA2Q96T91 129 aa10.87□□□□□ -0.67
SMAD1-215ENST00000515385 LY96Q9Y6Y9 160 aa10.87□□□□□ -0.67
SMAD1-215ENST00000515385 OR5B21A6NL26 309 aa10.86□□□□□ -0.67
SMAD1-215ENST00000515385 SIRPB1O00241 398 aa10.86□□□□□ -0.67
SMAD1-215ENST00000515385 S1PR2O95136 353 aa10.86□□□□□ -0.67
SMAD1-215ENST00000515385 AMTP48728 403 aa10.86□□□□□ -0.67
SMAD1-215ENST00000515385 LGALS4P56470 323 aa10.86□□□□□ -0.67
SMAD1-215ENST00000515385 VAMP3Q15836 100 aa10.86□□□□□ -0.67
SMAD1-215ENST00000515385 ABHD3Q8WU67 409 aa10.86□□□□□ -0.67
SMAD1-215ENST00000515385 FAM103A1Q9BTL3 118 aaKnown RBP10.86□□□□□ -0.67
SMAD1-215ENST00000515385 QTRT1Q9BXR0 403 aaKnown RBP10.86□□□□□ -0.67
SMAD1-215ENST00000515385 CHD3Q12873 2000 aaKnown RBP10.86□□□□□ -0.67
SMAD1-215ENST00000515385 M0QZ24 198 aa10.86□□□□□ -0.67
SMAD1-215ENST00000515385 TNFSF11O14788 317 aa10.86□□□□□ -0.67
SMAD1-215ENST00000515385 RBFOX2O43251 390 aaKnown RBP eCLIP10.86□□□□□ -0.67
SMAD1-215ENST00000515385 DHHO43323 396 aa10.86□□□□□ -0.67
SMAD1-215ENST00000515385 TLE1Q04724 770 aa10.86□□□□□ -0.67
SMAD1-215ENST00000515385 PSG3Q16557 428 aa10.86□□□□□ -0.67
SMAD1-215ENST00000515385 LRRC10Q5BKY1 277 aa10.86□□□□□ -0.67
SMAD1-215ENST00000515385 TMEM196Q5HYL7 178 aa10.86□□□□□ -0.67
SMAD1-215ENST00000515385 SAXO1Q8IYX7 474 aa10.86□□□□□ -0.67
SMAD1-215ENST00000515385 LOXL4Q96JB6 756 aa10.86□□□□□ -0.67
SMAD1-215ENST00000515385 TMEM204Q9BSN7 226 aa10.86□□□□□ -0.67
SMAD1-215ENST00000515385 SFXN3Q9BWM7 321 aa10.86□□□□□ -0.67
SMAD1-215ENST00000515385 GNB4Q9HAV0 340 aa10.86□□□□□ -0.67
SMAD1-215ENST00000515385 TRBV6-6A0A0A6YYG2 114 aa10.85□□□□□ -0.67
SMAD1-215ENST00000515385 SHISA8B8ZZ34 492 aa10.85□□□□□ -0.67
SMAD1-215ENST00000515385 TOX4O94842 621 aa10.85□□□□□ -0.67
SMAD1-215ENST00000515385 VAMP5O95183 116 aa10.85□□□□□ -0.67
SMAD1-215ENST00000515385 IGKV1-39P01597 117 aa10.85□□□□□ -0.67
SMAD1-215ENST00000515385 IGKV1-5P01602 117 aa10.85□□□□□ -0.67
SMAD1-215ENST00000515385 IGKV1D-39P04432 117 aa10.85□□□□□ -0.67
SMAD1-215ENST00000515385 GABRA2P47869 451 aa10.85□□□□□ -0.67
SMAD1-215ENST00000515385 RHOBP62745 196 aa10.85□□□□□ -0.67
SMAD1-215ENST00000515385 PDCD1Q15116 288 aa10.85□□□□□ -0.67
SMAD1-215ENST00000515385 VWC2Q2TAL6 325 aa10.85□□□□□ -0.67
SMAD1-215ENST00000515385 DCAF12Q5T6F0 453 aa10.85□□□□□ -0.67
SMAD1-215ENST00000515385 FAM27BQ5VT28 67 aa10.85□□□□□ -0.67
SMAD1-215ENST00000515385 PLCXD3Q63HM9 321 aa10.85□□□□□ -0.67
SMAD1-215ENST00000515385 STUMQ69YW2 141 aa10.85□□□□□ -0.67
SMAD1-215ENST00000515385 ZNF324BQ6AW86 544 aaPredicted RBP10.85□□□□□ -0.67
SMAD1-215ENST00000515385 MUC15Q8N387 334 aa10.85□□□□□ -0.67
SMAD1-215ENST00000515385 OR51H1Q8NH63 302 aa10.85□□□□□ -0.67
SMAD1-215ENST00000515385 OR2AE1Q8NHA4 323 aa10.85□□□□□ -0.67
SMAD1-215ENST00000515385 BORCS7Q96B45 105 aa10.85□□□□□ -0.67
SMAD1-215ENST00000515385 LIN7CQ9NUP9 197 aaKnown RBP10.85□□□□□ -0.67
SMAD1-215ENST00000515385 IGKV1-6A0A0C4DH72 117 aa10.85□□□□□ -0.67
SMAD1-215ENST00000515385 ZNF816-ZNF321PA0A0X1KG74 233 aa10.85□□□□□ -0.67
SMAD1-215ENST00000515385 A0A1W2PNR3 127 aa10.85□□□□□ -0.67
SMAD1-215ENST00000515385 A0A1W2PRS3 328 aa10.85□□□□□ -0.67
SMAD1-215ENST00000515385 SNURFLB1AK76 121 aa10.85□□□□□ -0.67
SMAD1-215ENST00000515385 ZNF324O75467 553 aaPredicted RBP10.85□□□□□ -0.67
SMAD1-215ENST00000515385 GOSR1O95249 250 aa10.85□□□□□ -0.67
SMAD1-215ENST00000515385 CLDN1O95832 211 aa10.85□□□□□ -0.67
SMAD1-215ENST00000515385 STAG3L3P0CL85 134 aa10.85□□□□□ -0.67
SMAD1-215ENST00000515385 ATXN8OSP0DMR3 200 aa10.85□□□□□ -0.67
SMAD1-215ENST00000515385 FBLP22087 321 aaKnown RBP10.85□□□□□ -0.67
SMAD1-215ENST00000515385 TRIP6Q15654 476 aaKnown RBP10.85□□□□□ -0.67
SMAD1-215ENST00000515385 RPEL1Q2QD12 228 aa10.85□□□□□ -0.67
SMAD1-215ENST00000515385 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.85□□□□□ -0.67
SMAD1-215ENST00000515385 RAET1LQ5VY80 246 aa10.85□□□□□ -0.67
SMAD1-215ENST00000515385 OR10P1Q8NGE3 313 aa10.85□□□□□ -0.67
SMAD1-215ENST00000515385 OR4P4Q8NGL7 312 aa10.85□□□□□ -0.67
SMAD1-215ENST00000515385 RDH5Q92781 318 aa10.85□□□□□ -0.67
SMAD1-215ENST00000515385 NPCDR1Q9BY65 106 aa10.85□□□□□ -0.67
SMAD1-215ENST00000515385 A0A1W2PS18 150 aa10.84□□□□□ -0.67
SMAD1-215ENST00000515385 SH2D1BO14796 132 aa10.84□□□□□ -0.67
SMAD1-215ENST00000515385 CELA2BP08218 269 aaPredicted RBP10.84□□□□□ -0.67
SMAD1-215ENST00000515385 C3orf79P0CE67 100 aa10.84□□□□□ -0.67
SMAD1-215ENST00000515385 CD38P28907 300 aa10.84□□□□□ -0.67
SMAD1-215ENST00000515385 IER3P46695 156 aa10.84□□□□□ -0.67
SMAD1-215ENST00000515385 PMP22Q01453 160 aa10.84□□□□□ -0.67
SMAD1-215ENST00000515385 DAZAP2Q15038 168 aaPredicted RBP10.84□□□□□ -0.67
SMAD1-215ENST00000515385 LDLRAD2Q5SZI1 272 aa10.84□□□□□ -0.67
SMAD1-215ENST00000515385 PCSK4Q6UW60 755 aa10.84□□□□□ -0.67
SMAD1-215ENST00000515385 PET117Q6UWS5 81 aa10.84□□□□□ -0.67
SMAD1-215ENST00000515385 ZNF611Q8N823 705 aa10.84□□□□□ -0.67
SMAD1-215ENST00000515385 ZNF114Q8NC26 417 aa10.84□□□□□ -0.67
SMAD1-215ENST00000515385 OR13H1Q8NG92 308 aa10.84□□□□□ -0.67
SMAD1-215ENST00000515385 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.84□□□□□ -0.67
SMAD1-215ENST00000515385 APOBEC3DQ96AK3 386 aaPredicted RBP10.84□□□□□ -0.67
SMAD1-215ENST00000515385 CLDN23Q96B33 292 aa10.84□□□□□ -0.67
SMAD1-215ENST00000515385 KLRF1Q9NZS2 232 aa10.84□□□□□ -0.67
SMAD1-215ENST00000515385 CLN8Q9UBY8 286 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms