RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 OR51J1Q9H342 316 aa19.21■□□□□ 0.67
SNF8-213ENST00000514929 PARP11Q9NR21 331 aa19.21■□□□□ 0.67
SNF8-213ENST00000514929 RDH8Q9NYR8 311 aa19.21■□□□□ 0.67
SNF8-213ENST00000514929 ZNF580Q9UK33 172 aa19.21■□□□□ 0.67
SNF8-213ENST00000514929 WASHC3Q9Y3C0 194 aa19.21■□□□□ 0.67
SNF8-213ENST00000514929 NOTOA8MTQ0 251 aa19.2■□□□□ 0.66
SNF8-213ENST00000514929 H0YJW9 148 aa19.2■□□□□ 0.66
SNF8-213ENST00000514929 BET1O15155 118 aa19.2■□□□□ 0.66
SNF8-213ENST00000514929 NDUFA3O95167 84 aa19.2■□□□□ 0.66
SNF8-213ENST00000514929 ARFRP1Q13795 201 aa19.2■□□□□ 0.66
SNF8-213ENST00000514929 RNF152Q8N8N0 203 aa19.2■□□□□ 0.66
SNF8-213ENST00000514929 CHCHD6Q9BRQ6 235 aa19.2■□□□□ 0.66
SNF8-213ENST00000514929 AURKAIP1Q9NWT8 199 aaPredicted RBP19.2■□□□□ 0.66
SNF8-213ENST00000514929 ATP6V0E1O15342 81 aa19.19■□□□□ 0.66
SNF8-213ENST00000514929 TALDO1P37837 337 aa19.19■□□□□ 0.66
SNF8-213ENST00000514929 PLGLAQ15195 96 aa19.19■□□□□ 0.66
SNF8-213ENST00000514929 TPRA1Q86W33 373 aa19.19■□□□□ 0.66
SNF8-213ENST00000514929 DRAXINQ8NBI3 349 aaPredicted RBP19.19■□□□□ 0.66
SNF8-213ENST00000514929 OR5AN1Q8NGI8 311 aa19.19■□□□□ 0.66
SNF8-213ENST00000514929 MRAPQ8TCY5 172 aa19.19■□□□□ 0.66
SNF8-213ENST00000514929 MAFIPQ8WZ33 124 aa19.19■□□□□ 0.66
SNF8-213ENST00000514929 DUX3Q96PT4 197 aa19.19■□□□□ 0.66
SNF8-213ENST00000514929 WSB1Q9Y6I7 421 aa19.19■□□□□ 0.66
SNF8-213ENST00000514929 IGHV7-81A0A0B4J1V7 117 aa19.18■□□□□ 0.66
SNF8-213ENST00000514929 RBBP9O75884 186 aa19.18■□□□□ 0.66
SNF8-213ENST00000514929 GSTT2P0CG29 244 aa19.18■□□□□ 0.66
SNF8-213ENST00000514929 GSTT2BP0CG30 244 aa19.18■□□□□ 0.66
SNF8-213ENST00000514929 CDX1P47902 265 aaPredicted RBP19.18■□□□□ 0.66
SNF8-213ENST00000514929 ARL6IP1Q15041 203 aa19.18■□□□□ 0.66
SNF8-213ENST00000514929 IGSF11Q5DX21 431 aa19.18■□□□□ 0.66
SNF8-213ENST00000514929 OR10J5Q8NHC4 309 aa19.18■□□□□ 0.66
SNF8-213ENST00000514929 P2RX4Q99571 388 aa19.18■□□□□ 0.66
SNF8-213ENST00000514929 OR51E2Q9H255 320 aa19.18■□□□□ 0.66
SNF8-213ENST00000514929 FBXL15Q9H469 300 aa19.18■□□□□ 0.66
SNF8-213ENST00000514929 ZNF230Q9UIE0 474 aaPredicted RBP19.18■□□□□ 0.66
SNF8-213ENST00000514929 DAPK2Q9UIK4 370 aa19.18■□□□□ 0.66
SNF8-213ENST00000514929 G3V318 75 aa19.17■□□□□ 0.66
SNF8-213ENST00000514929 CCL24O00175 119 aa19.17■□□□□ 0.66
SNF8-213ENST00000514929 RRHO14718 337 aa19.17■□□□□ 0.66
SNF8-213ENST00000514929 TFAP2AP05549 437 aa19.17■□□□□ 0.66
SNF8-213ENST00000514929 CABLES2Q9BTV7 478 aa19.17■□□□□ 0.66
SNF8-213ENST00000514929 GPR61Q9BZJ8 451 aa19.17■□□□□ 0.66
SNF8-213ENST00000514929 RRP15Q9Y3B9 282 aaKnown RBP19.17■□□□□ 0.66
SNF8-213ENST00000514929 TRAV41A0A0B4J266 112 aa19.16■□□□□ 0.66
SNF8-213ENST00000514929 PROP1O75360 226 aa19.16■□□□□ 0.66
SNF8-213ENST00000514929 PSMB8P28062 276 aa19.16■□□□□ 0.66
SNF8-213ENST00000514929 RAB25P57735 213 aa19.16■□□□□ 0.66
SNF8-213ENST00000514929 NEDD8Q15843 81 aa19.16■□□□□ 0.66
SNF8-213ENST00000514929 TMEM65Q6PI78 240 aa19.16■□□□□ 0.66
SNF8-213ENST00000514929 ZNF436-AS1Q8NC38 126 aaPredicted RBP19.16■□□□□ 0.66
SNF8-213ENST00000514929 OR8U1Q8NH10 309 aa19.16■□□□□ 0.66
SNF8-213ENST00000514929 DPF1Q92782 380 aa19.16■□□□□ 0.66
SNF8-213ENST00000514929 RAX2Q96IS3 184 aa19.16■□□□□ 0.66
SNF8-213ENST00000514929 RNF5Q99942 180 aa19.16■□□□□ 0.66
SNF8-213ENST00000514929 MCRIP2Q9BUT9 160 aaKnown RBP19.16■□□□□ 0.66
SNF8-213ENST00000514929 TOLLIPQ9H0E2 274 aa19.16■□□□□ 0.66
SNF8-213ENST00000514929 TRBV6-7A0A0A0MS04 114 aa19.15■□□□□ 0.66
SNF8-213ENST00000514929 M0R1X1 148 aa19.15■□□□□ 0.66
SNF8-213ENST00000514929 APOA2P02652 100 aa19.15■□□□□ 0.66
SNF8-213ENST00000514929 OR8U9P0C7N5 309 aa19.15■□□□□ 0.66
SNF8-213ENST00000514929 PPIFP30405 207 aaKnown RBP19.15■□□□□ 0.66
SNF8-213ENST00000514929 DEFB136Q30KP8 78 aa19.15■□□□□ 0.66
SNF8-213ENST00000514929 KCTD21Q4G0X4 260 aa19.15■□□□□ 0.66
SNF8-213ENST00000514929 ZNF383Q8NA42 475 aa19.15■□□□□ 0.66
SNF8-213ENST00000514929 GINS4Q9BRT9 223 aa19.15■□□□□ 0.66
SNF8-213ENST00000514929 OR2D2Q9H210 308 aa19.15■□□□□ 0.66
SNF8-213ENST00000514929 DIRAS3O95661 229 aa19.14■□□□□ 0.65
SNF8-213ENST00000514929 SNRPBP14678 240 aaKnown RBP19.14■□□□□ 0.65
SNF8-213ENST00000514929 SDC2P34741 201 aa19.14■□□□□ 0.65
SNF8-213ENST00000514929 LINC00205P59089 165 aa19.14■□□□□ 0.65
SNF8-213ENST00000514929 MXD1Q05195 221 aa19.14■□□□□ 0.65
SNF8-213ENST00000514929 CDNFQ49AH0 187 aa19.14■□□□□ 0.65
SNF8-213ENST00000514929 ZNF660Q6AZW8 331 aaPredicted RBP19.14■□□□□ 0.65
SNF8-213ENST00000514929 SFXN4Q6P4A7 337 aa19.14■□□□□ 0.65
SNF8-213ENST00000514929 ABHD5Q8WTS1 349 aa19.14■□□□□ 0.65
SNF8-213ENST00000514929 CENPOQ9BU64 300 aa19.14■□□□□ 0.65
SNF8-213ENST00000514929 METTL1Q9UBP6 276 aaKnown RBP19.14■□□□□ 0.65
SNF8-213ENST00000514929 RBM7Q9Y580 266 aaKnown RBP19.14■□□□□ 0.65
SNF8-213ENST00000514929 LOC100506127A0A0U1RQW1 187 aa19.13■□□□□ 0.65
SNF8-213ENST00000514929 HOXD3P31249 432 aaPredicted RBP19.13■□□□□ 0.65
SNF8-213ENST00000514929 RPS16P62249 146 aaKnown RBP19.13■□□□□ 0.65
SNF8-213ENST00000514929 CX3CL1P78423 397 aa19.13■□□□□ 0.65
SNF8-213ENST00000514929 SRSF7Q16629 238 aaKnown RBP eCLIP19.13■□□□□ 0.65
SNF8-213ENST00000514929 ECSCRQ19T08 205 aa19.13■□□□□ 0.65
SNF8-213ENST00000514929 PDPNQ86YL7 162 aa19.13■□□□□ 0.65
SNF8-213ENST00000514929 C4orf3Q8WVX3 66 aa19.13■□□□□ 0.65
SNF8-213ENST00000514929 TSNAXQ99598 290 aaKnown RBP19.13■□□□□ 0.65
SNF8-213ENST00000514929 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.13■□□□□ 0.65
SNF8-213ENST00000514929 ELF5Q9UKW6 265 aaPredicted RBP19.13■□□□□ 0.65
SNF8-213ENST00000514929 FCN1O00602 326 aa19.12■□□□□ 0.65
SNF8-213ENST00000514929 SCGNO76038 276 aa19.12■□□□□ 0.65
SNF8-213ENST00000514929 IGKV1-16P04430 117 aa19.12■□□□□ 0.65
SNF8-213ENST00000514929 CD36P16671 472 aa19.12■□□□□ 0.65
SNF8-213ENST00000514929 DTYMKP23919 212 aa19.12■□□□□ 0.65
SNF8-213ENST00000514929 NDPQ00604 133 aa19.12■□□□□ 0.65
SNF8-213ENST00000514929 PSG5Q15238 335 aa19.12■□□□□ 0.65
SNF8-213ENST00000514929 Q6ZS49 121 aa19.12■□□□□ 0.65
SNF8-213ENST00000514929 LGALS14Q8TCE9 139 aa19.12■□□□□ 0.65
SNF8-213ENST00000514929 CLCC1Q96S66 551 aa19.12■□□□□ 0.65
SNF8-213ENST00000514929 KLK15Q9H2R5 256 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms