RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 POLR3GO15318 223 aaPredicted RBP0.02□□□□□ -2.41
PDGFC-208ENST00000512711 SC5DO75845 299 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 PSMG1O95456 288 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 EPPINO95925 133 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 CCL3P10147 92 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 DEFA4P12838 97 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 PSMB3P49720 205 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 TAS2R45P59539 299 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 TAS2R30P59541 319 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 UBE2KP61086 200 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 GTF2BQ00403 316 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 GNA12Q03113 381 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 PAFAH1B3Q15102 231 aaKnown RBP0.02□□□□□ -2.41
PDGFC-208ENST00000512711 CDK10Q15131 360 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 ELOBQ15370 118 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 Q1T7F1 81 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 HNRNPA1L2Q32P51 320 aaKnown RBP0.02□□□□□ -2.41
PDGFC-208ENST00000512711 ARHGAP11BQ3KRB8 267 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 HSP90AA4PQ58FG1 418 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 FAM162BQ5T6X4 162 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 SPATA31B1PQ5VZV4 182 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 FAM173BQ6P4H8 233 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 SPATA8Q6RVD6 105 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 AMTNQ6UX39 209 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 ASCL4Q6XD76 172 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 PACRGLQ8N7B6 248 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 TMEM75Q8N9X5 138 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 ZNF439Q8NDP4 499 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 IFT81Q8WYA0 676 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 CCDC127Q96BQ5 260 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 TMA16Q96EY4 203 aaKnown RBP0.02□□□□□ -2.41
PDGFC-208ENST00000512711 MRAP2Q96G30 205 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 CATSPER2Q96P56 530 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 MYCBPQ99417 103 aaPredicted RBP0.02□□□□□ -2.41
PDGFC-208ENST00000512711 MRPL57Q9BQC6 102 aaKnown RBP0.02□□□□□ -2.41
PDGFC-208ENST00000512711 MAP1LC3CQ9BXW4 147 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 OR51E2Q9H255 320 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 SYT4Q9H2B2 425 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 FBXO44Q9H4M3 255 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 IFT46Q9NQC8 304 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 HHLA2Q9UM44 414 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 TIMM9Q9Y5J7 89 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 FAM215AQ9Y5M1 114 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 MEGF8Q7Z7M0 2845 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 GRIN2BQ13224 1484 aa0.02□□□□□ -2.41
PDGFC-208ENST00000512711 DNMT1P26358 1616 aaKnown RBP0.02□□□□□ -2.41
PDGFC-208ENST00000512711 EXPH5Q8NEV8 1989 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 FRAS1Q86XX4 4008 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 A0A1W2PPV4 95 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 TRAPPC13A5PLN9 417 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 GOLGA8IPA6NC78 632 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 FABP7O15540 132 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 SHOX2O60902 331 aaPredicted RBP0.01□□□□□ -2.41
PDGFC-208ENST00000512711 SERPINA7P05543 415 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 CRYBA1P05813 215 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 CD7P09564 240 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 UBBP0CG47 229 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 SRMP19623 302 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 CDK2P24941 298 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 IFNGR2P38484 337 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 OR1E2P47887 323 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 AQP5P55064 265 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 ATP5J2P56134 94 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 TAS2R20P59543 309 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 C1QTNF8P60827 252 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 FGF12P61328 243 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 TBC1D28Q2M2D7 210 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 CAVIN4Q5BKX8 364 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 TTC33Q6PID6 262 aaPredicted RBP0.01□□□□□ -2.41
PDGFC-208ENST00000512711 PID1Q7Z2X4 250 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 MTERF4Q7Z6M4 381 aaKnown RBP0.01□□□□□ -2.41
PDGFC-208ENST00000512711 SBSPONQ8IVN8 264 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 SLC22A24Q8N4F4 322 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 DAND5Q8N907 189 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 OR1L8Q8NGR8 309 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 OR5K1Q8NHB7 308 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 AGR3Q8TD06 166 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 SLC7A6Q92536 515 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 MED28Q9H204 178 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 GAL3ST2Q9H3Q3 398 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 TMEM216Q9P0N5 145 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 LINC00527Q9UJ94 153 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 UNC79Q9P2D8 2635 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 LAMA4Q16363 1823 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 CPAMD8Q8IZJ3 1885 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 FAT3Q8TDW7 4589 aa0.01□□□□□ -2.41
PDGFC-208ENST00000512711 DMBT1Q9UGM3 2413 aaPredicted RBP0.01□□□□□ -2.41
PDGFC-208ENST00000512711 TRBV6-7A0A0A0MS04 114 aa0□□□□□ -2.41
PDGFC-208ENST00000512711 TRAV38-1A0A0B4J264 116 aa0□□□□□ -2.41
PDGFC-208ENST00000512711 IGHV1-18A0A0C4DH31 117 aa0□□□□□ -2.41
PDGFC-208ENST00000512711 A0A0D9SEW6 157 aa0□□□□□ -2.41
PDGFC-208ENST00000512711 TRIM64CA6NLI5 447 aa0□□□□□ -2.41
PDGFC-208ENST00000512711 EFCAB9A8MZ26 197 aa0□□□□□ -2.41
PDGFC-208ENST00000512711 H3BT86 120 aa0□□□□□ -2.41
PDGFC-208ENST00000512711 M0QYV0 167 aa0□□□□□ -2.41
PDGFC-208ENST00000512711 GPR171O14626 319 aa0□□□□□ -2.41
PDGFC-208ENST00000512711 CDIPTO14735 213 aa0□□□□□ -2.41
PDGFC-208ENST00000512711 MRASO14807 208 aa0□□□□□ -2.41
PDGFC-208ENST00000512711 GSTZ1O43708 216 aaPredicted RBP0□□□□□ -2.41
PDGFC-208ENST00000512711 SNAP29O95721 258 aa0□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms