RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 TNFSF12O43508 249 aa13.48□□□□□ -0.25
SCLT1-208ENST00000506368 NUPR1O60356 82 aa13.48□□□□□ -0.25
SCLT1-208ENST00000506368 KITLGP21583 273 aa13.48□□□□□ -0.25
SCLT1-208ENST00000506368 PRSS8Q16651 343 aa13.48□□□□□ -0.25
SCLT1-208ENST00000506368 FFAR4Q5NUL3 377 aa13.48□□□□□ -0.25
SCLT1-208ENST00000506368 CALHM1Q8IU99 346 aa13.48□□□□□ -0.25
SCLT1-208ENST00000506368 MKXQ8IYA7 352 aa13.48□□□□□ -0.25
SCLT1-208ENST00000506368 THAP3Q8WTV1 239 aaPredicted RBP13.48□□□□□ -0.25
SCLT1-208ENST00000506368 PATZ1Q9HBE1 687 aaKnown RBP13.48□□□□□ -0.25
SCLT1-208ENST00000506368 TMEM38BQ9NVV0 291 aa13.48□□□□□ -0.25
SCLT1-208ENST00000506368 LHX2P50458 406 aa13.47□□□□□ -0.25
SCLT1-208ENST00000506368 MOB1BQ7L9L4 216 aa13.47□□□□□ -0.25
SCLT1-208ENST00000506368 OR10G3Q8NGC4 313 aa13.47□□□□□ -0.25
SCLT1-208ENST00000506368 OR51H1Q8NH63 302 aa13.47□□□□□ -0.25
SCLT1-208ENST00000506368 VN1R17PQ8TDU5 208 aa13.47□□□□□ -0.25
SCLT1-208ENST00000506368 LMX1AQ8TE12 382 aa13.47□□□□□ -0.25
SCLT1-208ENST00000506368 SPACA9Q96E40 222 aaPredicted RBP13.47□□□□□ -0.25
SCLT1-208ENST00000506368 PRDM14Q9GZV8 571 aa13.47□□□□□ -0.25
SCLT1-208ENST00000506368 FSCN3Q9NQT6 498 aa13.47□□□□□ -0.25
SCLT1-208ENST00000506368 RP1P56715 2156 aa13.47□□□□□ -0.25
SCLT1-208ENST00000506368 SAA2-SAA4A0A096LPE2 208 aa13.46□□□□□ -0.25
SCLT1-208ENST00000506368 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.46□□□□□ -0.25
SCLT1-208ENST00000506368 TIAF1O95411 115 aa13.46□□□□□ -0.25
SCLT1-208ENST00000506368 IGKV1-39P01597 117 aa13.46□□□□□ -0.25
SCLT1-208ENST00000506368 IGKV1-5P01602 117 aa13.46□□□□□ -0.25
SCLT1-208ENST00000506368 IGKV1D-39P04432 117 aa13.46□□□□□ -0.25
SCLT1-208ENST00000506368 CDC34P49427 236 aaPredicted RBP13.46□□□□□ -0.25
SCLT1-208ENST00000506368 RBX1P62877 108 aa13.46□□□□□ -0.25
SCLT1-208ENST00000506368 SUMO1P63165 101 aaKnown RBP13.46□□□□□ -0.25
SCLT1-208ENST00000506368 RABEPKQ7Z6M1 372 aa13.46□□□□□ -0.25
SCLT1-208ENST00000506368 C1orf174Q8IYL3 243 aa13.46□□□□□ -0.25
SCLT1-208ENST00000506368 CADM4Q8NFZ8 388 aa13.46□□□□□ -0.25
SCLT1-208ENST00000506368 TMEM204Q9BSN7 226 aa13.46□□□□□ -0.25
SCLT1-208ENST00000506368 SAMD10Q9BYL1 202 aa13.46□□□□□ -0.25
SCLT1-208ENST00000506368 HSPB7Q9UBY9 170 aa13.46□□□□□ -0.25
SCLT1-208ENST00000506368 LY96Q9Y6Y9 160 aa13.46□□□□□ -0.25
SCLT1-208ENST00000506368 RALGAPA1Q6GYQ0 2036 aa13.46□□□□□ -0.25
SCLT1-208ENST00000506368 NKX6-3A6NJ46 265 aa13.46□□□□□ -0.26
SCLT1-208ENST00000506368 TOMM40O96008 361 aa13.46□□□□□ -0.26
SCLT1-208ENST00000506368 MT-ND6P03923 174 aa13.46□□□□□ -0.26
SCLT1-208ENST00000506368 CTRLP40313 264 aa13.46□□□□□ -0.26
SCLT1-208ENST00000506368 PDCD1Q15116 288 aa13.46□□□□□ -0.26
SCLT1-208ENST00000506368 BATFQ16520 125 aa13.46□□□□□ -0.26
SCLT1-208ENST00000506368 FAM69BQ5VUD6 431 aa13.46□□□□□ -0.26
SCLT1-208ENST00000506368 TIPARPQ7Z3E1 657 aaKnown RBP13.46□□□□□ -0.26
SCLT1-208ENST00000506368 SIGLECL1Q8N7X8 197 aa13.46□□□□□ -0.26
SCLT1-208ENST00000506368 OR10P1Q8NGE3 313 aa13.46□□□□□ -0.26
SCLT1-208ENST00000506368 GSX1Q9H4S2 264 aaPredicted RBP13.46□□□□□ -0.26
SCLT1-208ENST00000506368 TP53TG3Q9ULZ0 132 aa13.46□□□□□ -0.26
SCLT1-208ENST00000506368 TDRD6O60522 2096 aaKnown RBP13.46□□□□□ -0.26
SCLT1-208ENST00000506368 A0A1W2PN81 502 aa13.45□□□□□ -0.26
SCLT1-208ENST00000506368 GJE1A6NN92 205 aa13.45□□□□□ -0.26
SCLT1-208ENST00000506368 PATE3B3GLJ2 98 aa13.45□□□□□ -0.26
SCLT1-208ENST00000506368 DUX1O43812 170 aa13.45□□□□□ -0.26
SCLT1-208ENST00000506368 CYC1P08574 325 aa13.45□□□□□ -0.26
SCLT1-208ENST00000506368 BCL3P20749 454 aa13.45□□□□□ -0.26
SCLT1-208ENST00000506368 COMPP49747 757 aaPredicted RBP13.45□□□□□ -0.26
SCLT1-208ENST00000506368 PTTG1IPP53801 180 aa13.45□□□□□ -0.26
SCLT1-208ENST00000506368 MORN2Q502X0 79 aa13.45□□□□□ -0.26
SCLT1-208ENST00000506368 LYSMD4Q5XG99 296 aa13.45□□□□□ -0.26
SCLT1-208ENST00000506368 OR10G8Q8NGN5 311 aa13.45□□□□□ -0.26
SCLT1-208ENST00000506368 ZNF501Q96CX3 271 aaPredicted RBP13.45□□□□□ -0.26
SCLT1-208ENST00000506368 GPHA2Q96T91 129 aa13.45□□□□□ -0.26
SCLT1-208ENST00000506368 ZNF703Q9H7S9 590 aaPredicted RBP13.45□□□□□ -0.26
SCLT1-208ENST00000506368 IL36BQ9NZH7 164 aa13.45□□□□□ -0.26
SCLT1-208ENST00000506368 DMXL1Q9Y485 3027 aa13.45□□□□□ -0.26
SCLT1-208ENST00000506368 TRAPPC2LH3BP13 241 aa13.44□□□□□ -0.26
SCLT1-208ENST00000506368 SERF1AO75920 110 aa13.44□□□□□ -0.26
SCLT1-208ENST00000506368 CLDN1O95832 211 aa13.44□□□□□ -0.26
SCLT1-208ENST00000506368 ZNF32P17041 273 aa13.44□□□□□ -0.26
SCLT1-208ENST00000506368 CD27P26842 260 aa13.44□□□□□ -0.26
SCLT1-208ENST00000506368 OR1D5P58170 312 aa13.44□□□□□ -0.26
SCLT1-208ENST00000506368 GNB1P62873 340 aa13.44□□□□□ -0.26
SCLT1-208ENST00000506368 OR10J3Q5JRS4 329 aa13.44□□□□□ -0.26
SCLT1-208ENST00000506368 BAGE3Q86Y29 109 aa13.44□□□□□ -0.26
SCLT1-208ENST00000506368 BAGE2Q86Y30 109 aa13.44□□□□□ -0.26
SCLT1-208ENST00000506368 C1QTNF5Q9BXJ0 243 aa13.44□□□□□ -0.26
SCLT1-208ENST00000506368 NPCDR1Q9BY65 106 aa13.44□□□□□ -0.26
SCLT1-208ENST00000506368 FOXJ2Q9P0K8 574 aa13.44□□□□□ -0.26
SCLT1-208ENST00000506368 ERRFI1Q9UJM3 462 aaPredicted RBP13.44□□□□□ -0.26
SCLT1-208ENST00000506368 CHD3Q12873 2000 aaKnown RBP13.44□□□□□ -0.26
SCLT1-208ENST00000506368 CFAP54Q96N23 3096 aa13.44□□□□□ -0.26
SCLT1-208ENST00000506368 DKK1O94907 266 aa13.44□□□□□ -0.26
SCLT1-208ENST00000506368 NPPCP23582 126 aa13.44□□□□□ -0.26
SCLT1-208ENST00000506368 TIMP3P35625 211 aa13.44□□□□□ -0.26
SCLT1-208ENST00000506368 ZIC4Q8N9L1 334 aa13.44□□□□□ -0.26
SCLT1-208ENST00000506368 ZBTB34Q8NCN2 500 aa13.44□□□□□ -0.26
SCLT1-208ENST00000506368 PSMF1Q92530 271 aa13.44□□□□□ -0.26
SCLT1-208ENST00000506368 OR2H1Q9GZK4 316 aa13.44□□□□□ -0.26
SCLT1-208ENST00000506368 MRPL18Q9H0U6 180 aaKnown RBP13.44□□□□□ -0.26
SCLT1-208ENST00000506368 ZNF552Q9H707 407 aaPredicted RBP13.44□□□□□ -0.26
SCLT1-208ENST00000506368 CDC42EP3Q9UKI2 254 aa13.44□□□□□ -0.26
SCLT1-208ENST00000506368 C1QTNF9BB2RNN3 333 aa13.43□□□□□ -0.26
SCLT1-208ENST00000506368 UBE2V1Q13404 147 aa13.43□□□□□ -0.26
SCLT1-208ENST00000506368 NRN1LQ496H8 165 aa13.43□□□□□ -0.26
SCLT1-208ENST00000506368 OR8G2PQ6IF36 304 aa13.43□□□□□ -0.26
SCLT1-208ENST00000506368 TCTEX1D1Q8N7M0 179 aa13.43□□□□□ -0.26
SCLT1-208ENST00000506368 OR5B3Q8NH48 314 aa13.43□□□□□ -0.26
SCLT1-208ENST00000506368 GNB1LQ9BYB4 327 aa13.43□□□□□ -0.26
SCLT1-208ENST00000506368 ARRDC1-AS1Q9H2J1 176 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms