RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 PHF21AQ96BD5 680 aa14.09□□□□□ -0.15
SMN1-204ENST00000506163 KCTD12Q96CX2 325 aaKnown RBP14.09□□□□□ -0.15
SMN1-204ENST00000506163 CITED2Q99967 270 aaPredicted RBP14.09□□□□□ -0.15
SMN1-204ENST00000506163 HSPB9Q9BQS6 159 aa14.09□□□□□ -0.15
SMN1-204ENST00000506163 GHITMQ9H3K2 345 aa14.09□□□□□ -0.15
SMN1-204ENST00000506163 DIABLOQ9NR28 239 aa14.09□□□□□ -0.15
SMN1-204ENST00000506163 PEX14O75381 377 aa14.08□□□□□ -0.15
SMN1-204ENST00000506163 FBXO24O75426 580 aa14.08□□□□□ -0.15
SMN1-204ENST00000506163 FCER2P06734 321 aa14.08□□□□□ -0.15
SMN1-204ENST00000506163 GPR12P47775 334 aa14.08□□□□□ -0.15
SMN1-204ENST00000506163 GPR141Q7Z602 305 aa14.08□□□□□ -0.15
SMN1-204ENST00000506163 S100A16Q96FQ6 103 aaKnown RBP14.08□□□□□ -0.15
SMN1-204ENST00000506163 LIN7CQ9NUP9 197 aaKnown RBP14.08□□□□□ -0.15
SMN1-204ENST00000506163 SDHAF2Q9NX18 166 aa14.08□□□□□ -0.15
SMN1-204ENST00000506163 COMMD3Q9UBI1 195 aa14.08□□□□□ -0.15
SMN1-204ENST00000506163 ZNF221Q9UK13 617 aa14.08□□□□□ -0.15
SMN1-204ENST00000506163 M0QZ24 198 aa14.07□□□□□ -0.16
SMN1-204ENST00000506163 NFYAP23511 347 aaPredicted RBP14.07□□□□□ -0.16
SMN1-204ENST00000506163 CD83Q01151 205 aa14.07□□□□□ -0.16
SMN1-204ENST00000506163 MMDQ15546 238 aa14.07□□□□□ -0.16
SMN1-204ENST00000506163 CNIH2Q6PI25 160 aa14.07□□□□□ -0.16
SMN1-204ENST00000506163 CENPVQ7Z7K6 275 aaPredicted RBP14.07□□□□□ -0.16
SMN1-204ENST00000506163 HOGA1Q86XE5 327 aa14.07□□□□□ -0.16
SMN1-204ENST00000506163 OR8H1Q8NGG4 311 aa14.07□□□□□ -0.16
SMN1-204ENST00000506163 GINS4Q9BRT9 223 aa14.07□□□□□ -0.16
SMN1-204ENST00000506163 OR2D2Q9H210 308 aa14.07□□□□□ -0.16
SMN1-204ENST00000506163 ANXA10Q9UJ72 324 aa14.07□□□□□ -0.16
SMN1-204ENST00000506163 GAB2Q9UQC2 676 aa14.07□□□□□ -0.16
SMN1-204ENST00000506163 J3QRK9 145 aa14.07□□□□□ -0.16
SMN1-204ENST00000506163 M0R1X1 148 aa14.07□□□□□ -0.16
SMN1-204ENST00000506163 RORCP51449 518 aa14.07□□□□□ -0.16
SMN1-204ENST00000506163 TAS2R20P59543 309 aa14.07□□□□□ -0.16
SMN1-204ENST00000506163 SPCS2Q15005 226 aa14.07□□□□□ -0.16
SMN1-204ENST00000506163 SLC35E3Q7Z769 313 aa14.07□□□□□ -0.16
SMN1-204ENST00000506163 ZNF329Q86UD4 541 aa14.07□□□□□ -0.16
SMN1-204ENST00000506163 BEST4Q8NFU0 473 aa14.07□□□□□ -0.16
SMN1-204ENST00000506163 NPBQ8NG41 125 aa14.07□□□□□ -0.16
SMN1-204ENST00000506163 ZNF107Q9UII5 783 aaPredicted RBP14.07□□□□□ -0.16
SMN1-204ENST00000506163 IGKV1D-13A0A0B4J2D9 117 aa14.06□□□□□ -0.16
SMN1-204ENST00000506163 MEIS3P1A6NDR6 274 aa14.06□□□□□ -0.16
SMN1-204ENST00000506163 OR5H14A6NHG9 310 aa14.06□□□□□ -0.16
SMN1-204ENST00000506163 HPGDSO60760 199 aa14.06□□□□□ -0.16
SMN1-204ENST00000506163 IGKV1-16P04430 117 aa14.06□□□□□ -0.16
SMN1-204ENST00000506163 IGKV1-13P0DP09 117 aa14.06□□□□□ -0.16
SMN1-204ENST00000506163 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.06□□□□□ -0.16
SMN1-204ENST00000506163 SNAPC3Q92966 411 aa14.06□□□□□ -0.16
SMN1-204ENST00000506163 RASL11BQ9BPW5 248 aa14.06□□□□□ -0.16
SMN1-204ENST00000506163 NBR2O15453 112 aa14.05□□□□□ -0.16
SMN1-204ENST00000506163 NDUFA3O95167 84 aa14.05□□□□□ -0.16
SMN1-204ENST00000506163 IGLV2-14P01704 120 aa14.05□□□□□ -0.16
SMN1-204ENST00000506163 HLA-DQB1P01920 261 aa14.05□□□□□ -0.16
SMN1-204ENST00000506163 ELK1P19419 428 aa14.05□□□□□ -0.16
SMN1-204ENST00000506163 NSUN5P1Q3KNT7 163 aa14.05□□□□□ -0.16
SMN1-204ENST00000506163 CLVS1Q8IUQ0 354 aaPredicted RBP14.05□□□□□ -0.16
SMN1-204ENST00000506163 FAM110DQ8TAY7 271 aaPredicted RBP14.05□□□□□ -0.16
SMN1-204ENST00000506163 WASHC3Q9Y3C0 194 aa14.05□□□□□ -0.16
SMN1-204ENST00000506163 PSMB11A5LHX3 300 aa14.04□□□□□ -0.16
SMN1-204ENST00000506163 TUSC2O75896 110 aa14.04□□□□□ -0.16
SMN1-204ENST00000506163 CSF1P09603 554 aa14.04□□□□□ -0.16
SMN1-204ENST00000506163 CTXN2P0C2S0 81 aa14.04□□□□□ -0.16
SMN1-204ENST00000506163 MC5RP33032 325 aa14.04□□□□□ -0.16
SMN1-204ENST00000506163 SOX6P35712 828 aa14.04□□□□□ -0.16
SMN1-204ENST00000506163 RPL5P46777 297 aaKnown RBP14.04□□□□□ -0.16
SMN1-204ENST00000506163 C5orf64Q2M2E5 130 aa14.04□□□□□ -0.16
SMN1-204ENST00000506163 C2orf68Q2NKX9 166 aa14.04□□□□□ -0.16
SMN1-204ENST00000506163 TMEM69Q5SWH9 247 aa14.04□□□□□ -0.16
SMN1-204ENST00000506163 STPG2Q8N412 459 aa14.04□□□□□ -0.16
SMN1-204ENST00000506163 OR2W1Q9Y3N9 320 aa14.04□□□□□ -0.16
SMN1-204ENST00000506163 IGHV7-81A0A0B4J1V7 117 aa14.03□□□□□ -0.16
SMN1-204ENST00000506163 H7C2Y5 167 aa14.03□□□□□ -0.16
SMN1-204ENST00000506163 FCN1O00602 326 aa14.03□□□□□ -0.16
SMN1-204ENST00000506163 APOA1P02647 267 aa14.03□□□□□ -0.16
SMN1-204ENST00000506163 ZNF182P17025 639 aaPredicted RBP14.03□□□□□ -0.16
SMN1-204ENST00000506163 NDUFA11Q86Y39 141 aa14.03□□□□□ -0.16
SMN1-204ENST00000506163 ACOT12Q8WYK0 555 aa14.03□□□□□ -0.16
SMN1-204ENST00000506163 CMTM3Q96MX0 182 aa14.03□□□□□ -0.16
SMN1-204ENST00000506163 MMP27Q9H306 513 aa14.03□□□□□ -0.16
SMN1-204ENST00000506163 FBXL15Q9H469 300 aa14.03□□□□□ -0.16
SMN1-204ENST00000506163 ANAPC10Q9UM13 185 aa14.03□□□□□ -0.16
SMN1-204ENST00000506163 RBM7Q9Y580 266 aaKnown RBP14.03□□□□□ -0.16
SMN1-204ENST00000506163 A0A1W2PRX2 142 aa14.02□□□□□ -0.16
SMN1-204ENST00000506163 LINC00473A8K010 186 aa14.02□□□□□ -0.16
SMN1-204ENST00000506163 RRHO14718 337 aa14.02□□□□□ -0.16
SMN1-204ENST00000506163 DUTP33316 252 aaKnown RBP14.02□□□□□ -0.16
SMN1-204ENST00000506163 CHPT1Q8WUD6 406 aa14.02□□□□□ -0.16
SMN1-204ENST00000506163 DDB2Q92466 427 aa14.02□□□□□ -0.16
SMN1-204ENST00000506163 NOTCH3Q9UM47 2321 aa14.02□□□□□ -0.17
SMN1-204ENST00000506163 TCRBV4S1A1TA0A5B7 111 aa14.01□□□□□ -0.17
SMN1-204ENST00000506163 AP4M1O00189 453 aa14.01□□□□□ -0.17
SMN1-204ENST00000506163 HLA-DRB1P01911 266 aa14.01□□□□□ -0.17
SMN1-204ENST00000506163 LUMP51884 338 aaPredicted RBP14.01□□□□□ -0.17
SMN1-204ENST00000506163 NDPQ00604 133 aa14.01□□□□□ -0.17
SMN1-204ENST00000506163 CFHR3Q02985 330 aa14.01□□□□□ -0.17
SMN1-204ENST00000506163 PSG5Q15238 335 aa14.01□□□□□ -0.17
SMN1-204ENST00000506163 LIN54Q6MZP7 749 aa14.01□□□□□ -0.17
SMN1-204ENST00000506163 SLC35D1Q9NTN3 355 aa14.01□□□□□ -0.17
SMN1-204ENST00000506163 MRPS7Q9Y2R9 242 aaKnown RBP14.01□□□□□ -0.17
SMN1-204ENST00000506163 NOTCH1P46531 2555 aa14□□□□□ -0.17
SMN1-204ENST00000506163 SRRM4A7MD48 611 aaKnown RBP14□□□□□ -0.17
SMN1-204ENST00000506163 RBBP9O75884 186 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms