RNA–Protein interactions for RNA: ENST00000503856.5

PDGFRA-203, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-203ENST00000503856 MMDQ15546 238 aa16.34■□□□□ 0.21
PDGFRA-203ENST00000503856 FAM71E2Q8N5Q1 922 aa16.34■□□□□ 0.21
PDGFRA-203ENST00000503856 GVQW1Q8N7I0 195 aa16.34■□□□□ 0.21
PDGFRA-203ENST00000503856 RASL11BQ9BPW5 248 aa16.34■□□□□ 0.21
PDGFRA-203ENST00000503856 OR2D2Q9H210 308 aa16.34■□□□□ 0.21
PDGFRA-203ENST00000503856 ANXA10Q9UJ72 324 aa16.34■□□□□ 0.21
PDGFRA-203ENST00000503856 VWFP04275 2813 aa16.33■□□□□ 0.21
PDGFRA-203ENST00000503856 OR5H14A6NHG9 310 aa16.33■□□□□ 0.2
PDGFRA-203ENST00000503856 LINC01548A6NM66 108 aa16.33■□□□□ 0.2
PDGFRA-203ENST00000503856 H0YJW9 148 aa16.33■□□□□ 0.2
PDGFRA-203ENST00000503856 EIF4EP06730 217 aaKnown RBP16.33■□□□□ 0.2
PDGFRA-203ENST00000503856 CTXN2P0C2S0 81 aa16.33■□□□□ 0.2
PDGFRA-203ENST00000503856 CNTFRP26992 372 aa16.33■□□□□ 0.2
PDGFRA-203ENST00000503856 CNIH2Q6PI25 160 aa16.33■□□□□ 0.2
PDGFRA-203ENST00000503856 C10orf99Q6UWK7 81 aa16.33■□□□□ 0.2
PDGFRA-203ENST00000503856 TREML4Q6UXN2 200 aa16.33■□□□□ 0.2
PDGFRA-203ENST00000503856 SLC35E3Q7Z769 313 aa16.33■□□□□ 0.2
PDGFRA-203ENST00000503856 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.33■□□□□ 0.2
PDGFRA-203ENST00000503856 OR5AN1Q8NGI8 311 aa16.33■□□□□ 0.2
PDGFRA-203ENST00000503856 NOL4LQ96MY1 436 aaPredicted RBP16.33■□□□□ 0.2
PDGFRA-203ENST00000503856 RBM7Q9Y580 266 aaKnown RBP16.33■□□□□ 0.2
PDGFRA-203ENST00000503856 M0R1X1 148 aa16.32■□□□□ 0.2
PDGFRA-203ENST00000503856 MC5RP33032 325 aa16.32■□□□□ 0.2
PDGFRA-203ENST00000503856 TMEM69Q5SWH9 247 aa16.32■□□□□ 0.2
PDGFRA-203ENST00000503856 HOGA1Q86XE5 327 aa16.32■□□□□ 0.2
PDGFRA-203ENST00000503856 CLVS1Q8IUQ0 354 aaPredicted RBP16.32■□□□□ 0.2
PDGFRA-203ENST00000503856 BEST4Q8NFU0 473 aa16.32■□□□□ 0.2
PDGFRA-203ENST00000503856 ACOT12Q8WYK0 555 aa16.32■□□□□ 0.2
PDGFRA-203ENST00000503856 CITED2Q99967 270 aaPredicted RBP16.32■□□□□ 0.2
PDGFRA-203ENST00000503856 SDHAF2Q9NX18 166 aa16.32■□□□□ 0.2
PDGFRA-203ENST00000503856 LINC00527Q9UJ94 153 aa16.32■□□□□ 0.2
PDGFRA-203ENST00000503856 GAB2Q9UQC2 676 aa16.32■□□□□ 0.2
PDGFRA-203ENST00000503856 MEIS3P1A6NDR6 274 aa16.31■□□□□ 0.2
PDGFRA-203ENST00000503856 H7C2Y5 167 aa16.31■□□□□ 0.2
PDGFRA-203ENST00000503856 J3QRK9 145 aa16.31■□□□□ 0.2
PDGFRA-203ENST00000503856 TSPAN15O95858 294 aa16.31■□□□□ 0.2
PDGFRA-203ENST00000503856 FCER2P06734 321 aa16.31■□□□□ 0.2
PDGFRA-203ENST00000503856 NFYAP23511 347 aaPredicted RBP16.31■□□□□ 0.2
PDGFRA-203ENST00000503856 TAS2R20P59543 309 aa16.31■□□□□ 0.2
PDGFRA-203ENST00000503856 C2orf68Q2NKX9 166 aa16.31■□□□□ 0.2
PDGFRA-203ENST00000503856 ZNF383Q8NA42 475 aa16.31■□□□□ 0.2
PDGFRA-203ENST00000503856 C5orf30Q96GV9 206 aa16.31■□□□□ 0.2
PDGFRA-203ENST00000503856 WASHC3Q9Y3C0 194 aa16.31■□□□□ 0.2
PDGFRA-203ENST00000503856 NBR2O15453 112 aa16.3■□□□□ 0.2
PDGFRA-203ENST00000503856 HPGDSO60760 199 aa16.3■□□□□ 0.2
PDGFRA-203ENST00000503856 APOA1P02647 267 aa16.3■□□□□ 0.2
PDGFRA-203ENST00000503856 CSF1P09603 554 aa16.3■□□□□ 0.2
PDGFRA-203ENST00000503856 SOX6P35712 828 aa16.3■□□□□ 0.2
PDGFRA-203ENST00000503856 RPL5P46777 297 aaKnown RBP16.3■□□□□ 0.2
PDGFRA-203ENST00000503856 CD83Q01151 205 aa16.3■□□□□ 0.2
PDGFRA-203ENST00000503856 NSUN5P1Q3KNT7 163 aa16.3■□□□□ 0.2
PDGFRA-203ENST00000503856 TCTEX1D4Q5JR98 221 aa16.3■□□□□ 0.2
PDGFRA-203ENST00000503856 CMTM3Q96MX0 182 aa16.3■□□□□ 0.2
PDGFRA-203ENST00000503856 HSPB9Q9BQS6 159 aa16.3■□□□□ 0.2
PDGFRA-203ENST00000503856 OR2W1Q9Y3N9 320 aa16.3■□□□□ 0.2
PDGFRA-203ENST00000503856 PSMB11A5LHX3 300 aa16.29■□□□□ 0.2
PDGFRA-203ENST00000503856 ZNF182P17025 639 aaPredicted RBP16.29■□□□□ 0.2
PDGFRA-203ENST00000503856 ELK1P19419 428 aa16.29■□□□□ 0.2
PDGFRA-203ENST00000503856 CBX5P45973 191 aa16.29■□□□□ 0.2
PDGFRA-203ENST00000503856 ARPC4P59998 168 aa16.29■□□□□ 0.2
PDGFRA-203ENST00000503856 SPCS2Q15005 226 aa16.29■□□□□ 0.2
PDGFRA-203ENST00000503856 ZNF329Q86UD4 541 aa16.29■□□□□ 0.2
PDGFRA-203ENST00000503856 FOXRED2Q8IWF2 684 aa16.29■□□□□ 0.2
PDGFRA-203ENST00000503856 NPBQ8NG41 125 aa16.29■□□□□ 0.2
PDGFRA-203ENST00000503856 CHPT1Q8WUD6 406 aa16.29■□□□□ 0.2
PDGFRA-203ENST00000503856 ADARB2-AS1A8MUL3 147 aa16.28■□□□□ 0.2
PDGFRA-203ENST00000503856 NDUFA3O95167 84 aa16.28■□□□□ 0.2
PDGFRA-203ENST00000503856 HLA-DQB1P01920 261 aa16.28■□□□□ 0.2
PDGFRA-203ENST00000503856 LUMP51884 338 aaPredicted RBP16.28■□□□□ 0.2
PDGFRA-203ENST00000503856 C5orf64Q2M2E5 130 aa16.28■□□□□ 0.2
PDGFRA-203ENST00000503856 MZT2AQ6P582 158 aa16.28■□□□□ 0.2
PDGFRA-203ENST00000503856 NDUFA11Q86Y39 141 aa16.28■□□□□ 0.2
PDGFRA-203ENST00000503856 STPG2Q8N412 459 aa16.28■□□□□ 0.2
PDGFRA-203ENST00000503856 FAM110DQ8TAY7 271 aaPredicted RBP16.28■□□□□ 0.2
PDGFRA-203ENST00000503856 SNAPC3Q92966 411 aa16.28■□□□□ 0.2
PDGFRA-203ENST00000503856 MMP27Q9H306 513 aa16.28■□□□□ 0.2
PDGFRA-203ENST00000503856 KIAA1456Q9P272 454 aa16.28■□□□□ 0.2
PDGFRA-203ENST00000503856 MRPS7Q9Y2R9 242 aaKnown RBP16.28■□□□□ 0.2
PDGFRA-203ENST00000503856 TNCP24821 2201 aa16.27■□□□□ 0.2
PDGFRA-203ENST00000503856 IGKV1D-13A0A0B4J2D9 117 aa16.27■□□□□ 0.2
PDGFRA-203ENST00000503856 SMIM31A0A1B0GVY4 71 aa16.27■□□□□ 0.2
PDGFRA-203ENST00000503856 AP4M1O00189 453 aa16.27■□□□□ 0.2
PDGFRA-203ENST00000503856 KCNAB3O43448 404 aa16.27■□□□□ 0.2
PDGFRA-203ENST00000503856 RBBP9O75884 186 aa16.27■□□□□ 0.2
PDGFRA-203ENST00000503856 TUSC2O75896 110 aa16.27■□□□□ 0.2
PDGFRA-203ENST00000503856 APOA2P02652 100 aa16.27■□□□□ 0.2
PDGFRA-203ENST00000503856 IGKV1-16P04430 117 aa16.27■□□□□ 0.2
PDGFRA-203ENST00000503856 IGKV1-13P0DP09 117 aa16.27■□□□□ 0.2
PDGFRA-203ENST00000503856 PRSS3P35030 304 aa16.27■□□□□ 0.2
PDGFRA-203ENST00000503856 OR4X2Q8NGF9 303 aa16.27■□□□□ 0.2
PDGFRA-203ENST00000503856 RAB2BQ8WUD1 216 aa16.27■□□□□ 0.2
PDGFRA-203ENST00000503856 AP3S1Q92572 193 aa16.27■□□□□ 0.2
PDGFRA-203ENST00000503856 FBXL15Q9H469 300 aa16.27■□□□□ 0.2
PDGFRA-203ENST00000503856 IFT46Q9NQC8 304 aa16.27■□□□□ 0.2
PDGFRA-203ENST00000503856 SLC35D1Q9NTN3 355 aa16.27■□□□□ 0.2
PDGFRA-203ENST00000503856 ZNF107Q9UII5 783 aaPredicted RBP16.27■□□□□ 0.2
PDGFRA-203ENST00000503856 TCRBV4S1A1TA0A5B7 111 aa16.26■□□□□ 0.19
PDGFRA-203ENST00000503856 RRHO14718 337 aa16.26■□□□□ 0.19
PDGFRA-203ENST00000503856 TMBIM6P55061 237 aa16.26■□□□□ 0.19
PDGFRA-203ENST00000503856 RPS16P62249 146 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms