RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 RDH8Q9NYR8 311 aa12.6□□□□□ -0.39
NR1H3-227ENST00000498548 RAB27BO00194 218 aa12.59□□□□□ -0.39
NR1H3-227ENST00000498548 FCN1O00602 326 aa12.59□□□□□ -0.39
NR1H3-227ENST00000498548 BET1O15155 118 aa12.59□□□□□ -0.39
NR1H3-227ENST00000498548 NDUFA3O95167 84 aa12.59□□□□□ -0.39
NR1H3-227ENST00000498548 HLA-DRB1P01911 266 aa12.59□□□□□ -0.39
NR1H3-227ENST00000498548 FCGR3AP08637 254 aa12.59□□□□□ -0.39
NR1H3-227ENST00000498548 GSTP1P09211 210 aaKnown RBP12.59□□□□□ -0.39
NR1H3-227ENST00000498548 RAB6AP20340 208 aa12.59□□□□□ -0.39
NR1H3-227ENST00000498548 RANBP1P43487 201 aa12.59□□□□□ -0.39
NR1H3-227ENST00000498548 MRPS15P82914 257 aaKnown RBP12.59□□□□□ -0.39
NR1H3-227ENST00000498548 EDARADDQ8WWZ3 215 aa12.59□□□□□ -0.39
NR1H3-227ENST00000498548 PTX4Q96A99 478 aa12.59□□□□□ -0.39
NR1H3-227ENST00000498548 YTHDF1Q9BYJ9 559 aaKnown RBP12.59□□□□□ -0.39
NR1H3-227ENST00000498548 ATG5Q9H1Y0 275 aa12.59□□□□□ -0.39
NR1H3-227ENST00000498548 OR51E2Q9H255 320 aa12.59□□□□□ -0.39
NR1H3-227ENST00000498548 ZNF221Q9UK13 617 aa12.59□□□□□ -0.39
NR1H3-227ENST00000498548 FBXO7Q9Y3I1 522 aa12.59□□□□□ -0.39
NR1H3-227ENST00000498548 WI2-2373I1.2A0A1W2PRP0 233 aa12.58□□□□□ -0.4
NR1H3-227ENST00000498548 K7EIL1 84 aa12.58□□□□□ -0.4
NR1H3-227ENST00000498548 MFNGO00587 321 aa12.58□□□□□ -0.4
NR1H3-227ENST00000498548 RRHO14718 337 aa12.58□□□□□ -0.4
NR1H3-227ENST00000498548 FABP7O15540 132 aa12.58□□□□□ -0.4
NR1H3-227ENST00000498548 GALP22466 123 aa12.58□□□□□ -0.4
NR1H3-227ENST00000498548 GADD45AP24522 165 aa12.58□□□□□ -0.4
NR1H3-227ENST00000498548 PSMB8P28062 276 aa12.58□□□□□ -0.4
NR1H3-227ENST00000498548 PPIFP30405 207 aaKnown RBP12.58□□□□□ -0.4
NR1H3-227ENST00000498548 CDX1P47902 265 aaPredicted RBP12.58□□□□□ -0.4
NR1H3-227ENST00000498548 NDPQ00604 133 aa12.58□□□□□ -0.4
NR1H3-227ENST00000498548 KIR2DS1Q14954 304 aa12.58□□□□□ -0.4
NR1H3-227ENST00000498548 PLGLAQ15195 96 aa12.58□□□□□ -0.4
NR1H3-227ENST00000498548 RNF152Q8N8N0 203 aa12.58□□□□□ -0.4
NR1H3-227ENST00000498548 ZNF383Q8NA42 475 aa12.58□□□□□ -0.4
NR1H3-227ENST00000498548 OR5AN1Q8NGI8 311 aa12.58□□□□□ -0.4
NR1H3-227ENST00000498548 OR4A4PQ8NGN8 299 aa12.58□□□□□ -0.4
NR1H3-227ENST00000498548 RNF167Q9H6Y7 350 aa12.58□□□□□ -0.4
NR1H3-227ENST00000498548 STUB1Q9UNE7 303 aa12.58□□□□□ -0.4
NR1H3-227ENST00000498548 WASHC3Q9Y3C0 194 aa12.58□□□□□ -0.4
NR1H3-227ENST00000498548 TRAV41A0A0B4J266 112 aa12.57□□□□□ -0.4
NR1H3-227ENST00000498548 OR5H14A6NHG9 310 aa12.57□□□□□ -0.4
NR1H3-227ENST00000498548 M0R1X1 148 aa12.57□□□□□ -0.4
NR1H3-227ENST00000498548 DUS4LO95620 317 aaKnown RBP12.57□□□□□ -0.4
NR1H3-227ENST00000498548 CLEC2LP0C7M8 214 aa12.57□□□□□ -0.4
NR1H3-227ENST00000498548 OR8U9P0C7N5 309 aa12.57□□□□□ -0.4
NR1H3-227ENST00000498548 HIST1H1DP16402 221 aaKnown RBP12.57□□□□□ -0.4
NR1H3-227ENST00000498548 MC5RP33032 325 aa12.57□□□□□ -0.4
NR1H3-227ENST00000498548 ARFRP1Q13795 201 aa12.57□□□□□ -0.4
NR1H3-227ENST00000498548 ECSCRQ19T08 205 aa12.57□□□□□ -0.4
NR1H3-227ENST00000498548 OR8U1Q8NH10 309 aa12.57□□□□□ -0.4
NR1H3-227ENST00000498548 CASTOR1Q8WTX7 329 aa12.57□□□□□ -0.4
NR1H3-227ENST00000498548 FCGR1BQ92637 280 aa12.57□□□□□ -0.4
NR1H3-227ENST00000498548 OR5B12Q96R08 314 aa12.57□□□□□ -0.4
NR1H3-227ENST00000498548 GNB4Q9HAV0 340 aa12.57□□□□□ -0.4
NR1H3-227ENST00000498548 SSR3Q9UNL2 185 aa12.57□□□□□ -0.4
NR1H3-227ENST00000498548 GAB2Q9UQC2 676 aa12.57□□□□□ -0.4
NR1H3-227ENST00000498548 A3GALT2U3KPV4 340 aa12.57□□□□□ -0.4
NR1H3-227ENST00000498548 IGKV1D-8A0A087WSZ0 117 aa12.56□□□□□ -0.4
NR1H3-227ENST00000498548 METTL21EPA6NDL7 271 aa12.56□□□□□ -0.4
NR1H3-227ENST00000498548 NOTOA8MTQ0 251 aa12.56□□□□□ -0.4
NR1H3-227ENST00000498548 OR5H8P0DN80 308 aa12.56□□□□□ -0.4
NR1H3-227ENST00000498548 SLC6A1P30531 599 aa12.56□□□□□ -0.4
NR1H3-227ENST00000498548 FGF9P31371 208 aaPredicted RBP12.56□□□□□ -0.4
NR1H3-227ENST00000498548 TALDO1P37837 337 aa12.56□□□□□ -0.4
NR1H3-227ENST00000498548 RPS16P62249 146 aaKnown RBP12.56□□□□□ -0.4
NR1H3-227ENST00000498548 CX3CL1P78423 397 aa12.56□□□□□ -0.4
NR1H3-227ENST00000498548 MXD1Q05195 221 aa12.56□□□□□ -0.4
NR1H3-227ENST00000498548 KIAA0141Q14154 515 aaPredicted RBP12.56□□□□□ -0.4
NR1H3-227ENST00000498548 PSG5Q15238 335 aa12.56□□□□□ -0.4
NR1H3-227ENST00000498548 CDNFQ49AH0 187 aa12.56□□□□□ -0.4
NR1H3-227ENST00000498548 DEFB121Q5J5C9 76 aa12.56□□□□□ -0.4
NR1H3-227ENST00000498548 TMEM65Q6PI78 240 aa12.56□□□□□ -0.4
NR1H3-227ENST00000498548 ZNF773Q6PK81 442 aa12.56□□□□□ -0.4
NR1H3-227ENST00000498548 ZNF491Q8N8L2 437 aa12.56□□□□□ -0.4
NR1H3-227ENST00000498548 ABHD5Q8WTS1 349 aa12.56□□□□□ -0.4
NR1H3-227ENST00000498548 FAM103A1Q9BTL3 118 aaKnown RBP12.56□□□□□ -0.4
NR1H3-227ENST00000498548 GHITMQ9H3K2 345 aa12.56□□□□□ -0.4
NR1H3-227ENST00000498548 METTL1Q9UBP6 276 aaKnown RBP12.56□□□□□ -0.4
NR1H3-227ENST00000498548 DAPK2Q9UIK4 370 aa12.56□□□□□ -0.4
NR1H3-227ENST00000498548 TRBV6-7A0A0A0MS04 114 aa12.55□□□□□ -0.4
NR1H3-227ENST00000498548 A0A1W2PN81 502 aa12.55□□□□□ -0.4
NR1H3-227ENST00000498548 J3QRK9 145 aa12.55□□□□□ -0.4
NR1H3-227ENST00000498548 IGLV1-40P01703 118 aa12.55□□□□□ -0.4
NR1H3-227ENST00000498548 IGKV1-16P04430 117 aa12.55□□□□□ -0.4
NR1H3-227ENST00000498548 TFAP2AP05549 437 aa12.55□□□□□ -0.4
NR1H3-227ENST00000498548 EGR2P11161 476 aaPredicted RBP12.55□□□□□ -0.4
NR1H3-227ENST00000498548 CHRNA7P36544 502 aa12.55□□□□□ -0.4
NR1H3-227ENST00000498548 NEDD8Q15843 81 aa12.55□□□□□ -0.4
NR1H3-227ENST00000498548 OR10J5Q8NHC4 309 aa12.55□□□□□ -0.4
NR1H3-227ENST00000498548 C5orf30Q96GV9 206 aa12.55□□□□□ -0.4
NR1H3-227ENST00000498548 CHCHD6Q9BRQ6 235 aa12.55□□□□□ -0.4
NR1H3-227ENST00000498548 CABLES2Q9BTV7 478 aa12.55□□□□□ -0.4
NR1H3-227ENST00000498548 TOLLIPQ9H0E2 274 aa12.55□□□□□ -0.4
NR1H3-227ENST00000498548 OR2D2Q9H210 308 aa12.55□□□□□ -0.4
NR1H3-227ENST00000498548 SDHAF2Q9NX18 166 aa12.55□□□□□ -0.4
NR1H3-227ENST00000498548 ZNF580Q9UK33 172 aa12.55□□□□□ -0.4
NR1H3-227ENST00000498548 SOX15O60248 233 aa12.54□□□□□ -0.4
NR1H3-227ENST00000498548 SDC2P34741 201 aa12.54□□□□□ -0.4
NR1H3-227ENST00000498548 SERPINB10P48595 397 aa12.54□□□□□ -0.4
NR1H3-227ENST00000498548 RAB9AP51151 201 aa12.54□□□□□ -0.4
NR1H3-227ENST00000498548 EGFEM1PQ0D2K5 195 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms