RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 EHFQ9NZC4 300 aa12.72□□□□□ -0.37
TRA2A-208ENST00000490942 RBM7Q9Y580 266 aaKnown RBP12.72□□□□□ -0.37
TRA2A-208ENST00000490942 OR5H14A6NHG9 310 aa12.71□□□□□ -0.37
TRA2A-208ENST00000490942 GPR137BO60478 399 aa12.71□□□□□ -0.37
TRA2A-208ENST00000490942 PPYP01298 95 aa12.71□□□□□ -0.37
TRA2A-208ENST00000490942 NFYAP23511 347 aaPredicted RBP12.71□□□□□ -0.37
TRA2A-208ENST00000490942 HLA-DMAP28067 261 aa12.71□□□□□ -0.37
TRA2A-208ENST00000490942 HRH1P35367 487 aa12.71□□□□□ -0.37
TRA2A-208ENST00000490942 ZNF645Q8N7E2 425 aa12.71□□□□□ -0.37
TRA2A-208ENST00000490942 GDPD1Q8N9F7 314 aa12.71□□□□□ -0.37
TRA2A-208ENST00000490942 OR8H1Q8NGG4 311 aa12.71□□□□□ -0.37
TRA2A-208ENST00000490942 OR5AN1Q8NGI8 311 aa12.71□□□□□ -0.37
TRA2A-208ENST00000490942 OR6F1Q8NGZ6 308 aa12.71□□□□□ -0.37
TRA2A-208ENST00000490942 OR56B4Q8NH76 319 aa12.71□□□□□ -0.37
TRA2A-208ENST00000490942 ADTRPQ96IZ2 230 aa12.71□□□□□ -0.37
TRA2A-208ENST00000490942 NABP2Q9BQ15 211 aa12.71□□□□□ -0.37
TRA2A-208ENST00000490942 OR2D2Q9H210 308 aa12.71□□□□□ -0.37
TRA2A-208ENST00000490942 M0QZK8 103 aa12.7□□□□□ -0.38
TRA2A-208ENST00000490942 PROP1O75360 226 aa12.7□□□□□ -0.38
TRA2A-208ENST00000490942 OR2F2O95006 317 aa12.7□□□□□ -0.38
TRA2A-208ENST00000490942 REG1BP48304 166 aa12.7□□□□□ -0.38
TRA2A-208ENST00000490942 RFX2P48378 723 aa12.7□□□□□ -0.38
TRA2A-208ENST00000490942 LSAMPQ13449 338 aa12.7□□□□□ -0.38
TRA2A-208ENST00000490942 MEF2DQ14814 521 aa12.7□□□□□ -0.38
TRA2A-208ENST00000490942 ZNF79Q15937 498 aa12.7□□□□□ -0.38
TRA2A-208ENST00000490942 RNASE10Q5GAN6 216 aaKnown RBP12.7□□□□□ -0.38
TRA2A-208ENST00000490942 MOB3BQ86TA1 216 aa12.7□□□□□ -0.38
TRA2A-208ENST00000490942 TMEM17Q86X19 198 aa12.7□□□□□ -0.38
TRA2A-208ENST00000490942 OR2T10Q8NGZ9 312 aa12.7□□□□□ -0.38
TRA2A-208ENST00000490942 TMEM158Q8WZ71 300 aa12.7□□□□□ -0.38
TRA2A-208ENST00000490942 MOB3AQ96BX8 217 aa12.7□□□□□ -0.38
TRA2A-208ENST00000490942 RANBP3Q9H6Z4 567 aaPredicted RBP12.7□□□□□ -0.38
TRA2A-208ENST00000490942 SDHAF2Q9NX18 166 aa12.7□□□□□ -0.38
TRA2A-208ENST00000490942 RNF150Q9ULK6 438 aa12.7□□□□□ -0.38
TRA2A-208ENST00000490942 PMP2P02689 132 aa12.69□□□□□ -0.38
TRA2A-208ENST00000490942 CT45A6P0DMU7 189 aa12.69□□□□□ -0.38
TRA2A-208ENST00000490942 CT45A5P0DMU8 189 aa12.69□□□□□ -0.38
TRA2A-208ENST00000490942 CT45A7P0DMV0 189 aa12.69□□□□□ -0.38
TRA2A-208ENST00000490942 AADACP22760 399 aa12.69□□□□□ -0.38
TRA2A-208ENST00000490942 PAX6P26367 422 aa12.69□□□□□ -0.38
TRA2A-208ENST00000490942 RAB13P51153 203 aa12.69□□□□□ -0.38
TRA2A-208ENST00000490942 HERV-K104P61576 105 aa12.69□□□□□ -0.38
TRA2A-208ENST00000490942 RPL39P5Q59GN2 51 aa12.69□□□□□ -0.38
TRA2A-208ENST00000490942 Q8N402 240 aa12.69□□□□□ -0.38
TRA2A-208ENST00000490942 CAPSLQ8WWF8 208 aa12.69□□□□□ -0.38
TRA2A-208ENST00000490942 RBM14Q96PK6 669 aaKnown RBP12.69□□□□□ -0.38
TRA2A-208ENST00000490942 RNF5Q99942 180 aa12.69□□□□□ -0.38
TRA2A-208ENST00000490942 THAP7Q9BT49 309 aaPredicted RBP12.69□□□□□ -0.38
TRA2A-208ENST00000490942 MRPL20Q9BYC9 149 aaKnown RBP12.69□□□□□ -0.38
TRA2A-208ENST00000490942 SRRQ9GZT4 340 aa12.69□□□□□ -0.38
TRA2A-208ENST00000490942 IGKV1D-13A0A0B4J2D9 117 aa12.68□□□□□ -0.38
TRA2A-208ENST00000490942 ANKRD20A5PA0PJZ0 165 aa12.68□□□□□ -0.38
TRA2A-208ENST00000490942 FAM181BA6NEQ2 426 aa12.68□□□□□ -0.38
TRA2A-208ENST00000490942 NDUFA7O95182 113 aa12.68□□□□□ -0.38
TRA2A-208ENST00000490942 MOSP00540 346 aa12.68□□□□□ -0.38
TRA2A-208ENST00000490942 CD3DP04234 171 aa12.68□□□□□ -0.38
TRA2A-208ENST00000490942 IFNA6P05013 189 aa12.68□□□□□ -0.38
TRA2A-208ENST00000490942 CRYBA1P05813 215 aa12.68□□□□□ -0.38
TRA2A-208ENST00000490942 FCER2P06734 321 aa12.68□□□□□ -0.38
TRA2A-208ENST00000490942 SNRNP70P08621 437 aaKnown RBP12.68□□□□□ -0.38
TRA2A-208ENST00000490942 IGKV1-13P0DP09 117 aa12.68□□□□□ -0.38
TRA2A-208ENST00000490942 THBS3P49746 956 aa12.68□□□□□ -0.38
TRA2A-208ENST00000490942 UCP3P55916 312 aa12.68□□□□□ -0.38
TRA2A-208ENST00000490942 AP3S2P59780 193 aa12.68□□□□□ -0.38
TRA2A-208ENST00000490942 TSPAN5P62079 268 aa12.68□□□□□ -0.38
TRA2A-208ENST00000490942 PYDC2Q56P42 97 aa12.68□□□□□ -0.38
TRA2A-208ENST00000490942 DHRS7BQ6IAN0 325 aaPredicted RBP12.68□□□□□ -0.38
TRA2A-208ENST00000490942 STEAP1BQ6NZ63 245 aa12.68□□□□□ -0.38
TRA2A-208ENST00000490942 LPCAT3Q6P1A2 487 aa12.68□□□□□ -0.38
TRA2A-208ENST00000490942 Q8N6K4 173 aa12.68□□□□□ -0.38
TRA2A-208ENST00000490942 TRIM63Q969Q1 353 aa12.68□□□□□ -0.38
TRA2A-208ENST00000490942 DUX5Q96PT3 197 aa12.68□□□□□ -0.38
TRA2A-208ENST00000490942 HSD17B10Q99714 261 aaKnown RBP12.68□□□□□ -0.38
TRA2A-208ENST00000490942 ZNF2Q9BSG1 426 aaPredicted RBP12.68□□□□□ -0.38
TRA2A-208ENST00000490942 NPFFR1Q9GZQ6 430 aa12.68□□□□□ -0.38
TRA2A-208ENST00000490942 H0YJW9 148 aa12.67□□□□□ -0.38
TRA2A-208ENST00000490942 M0R1X1 148 aa12.67□□□□□ -0.38
TRA2A-208ENST00000490942 FGF16O43320 207 aa12.67□□□□□ -0.38
TRA2A-208ENST00000490942 RAB3DO95716 219 aa12.67□□□□□ -0.38
TRA2A-208ENST00000490942 IGKV1D-33P01593 117 aa12.67□□□□□ -0.38
TRA2A-208ENST00000490942 IGKV1-33P01594 117 aa12.67□□□□□ -0.38
TRA2A-208ENST00000490942 IGLV2-14P01704 120 aa12.67□□□□□ -0.38
TRA2A-208ENST00000490942 AKAIN1P0CW23 69 aa12.67□□□□□ -0.38
TRA2A-208ENST00000490942 HKR1P10072 659 aa12.67□□□□□ -0.38
TRA2A-208ENST00000490942 RRASP10301 218 aa12.67□□□□□ -0.38
TRA2A-208ENST00000490942 DUTP33316 252 aaKnown RBP12.67□□□□□ -0.38
TRA2A-208ENST00000490942 LY6EQ16553 131 aa12.67□□□□□ -0.38
TRA2A-208ENST00000490942 RNASE12Q5GAN4 147 aaKnown RBP12.67□□□□□ -0.38
TRA2A-208ENST00000490942 CCBE1Q6UXH8 406 aaPredicted RBP12.67□□□□□ -0.38
TRA2A-208ENST00000490942 ZNF66Q6ZN08 573 aa12.67□□□□□ -0.38
TRA2A-208ENST00000490942 LHFPL1Q86WI0 220 aa12.67□□□□□ -0.38
TRA2A-208ENST00000490942 PDPNQ86YL7 162 aa12.67□□□□□ -0.38
TRA2A-208ENST00000490942 S100ZQ8WXG8 99 aa12.67□□□□□ -0.38
TRA2A-208ENST00000490942 EAF1Q96JC9 268 aaPredicted RBP12.67□□□□□ -0.38
TRA2A-208ENST00000490942 C1RLQ9NZP8 487 aa12.67□□□□□ -0.38
TRA2A-208ENST00000490942 WASHC3Q9Y3C0 194 aa12.67□□□□□ -0.38
TRA2A-208ENST00000490942 A0A1B0GUS0 222 aa12.66□□□□□ -0.38
TRA2A-208ENST00000490942 CHST1O43916 411 aa12.66□□□□□ -0.38
TRA2A-208ENST00000490942 TSPAN9O75954 239 aa12.66□□□□□ -0.38
TRA2A-208ENST00000490942 APOA2P02652 100 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms