RNA–Protein interactions for RNA: ENST00000490077.5

TNXB-206, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,756 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-206ENST00000490077 OBP2BQ9NPH6 170 aa11.12□□□□□ -0.63
TNXB-206ENST00000490077 SPTAN1Q13813 2472 aaKnown RBP11.12□□□□□ -0.63
TNXB-206ENST00000490077 LOC102723971A0A1B0GUV8 181 aa11.11□□□□□ -0.63
TNXB-206ENST00000490077 CLEC18AA5D8T8 446 aa11.11□□□□□ -0.63
TNXB-206ENST00000490077 C1QTNF9BB2RNN3 333 aa11.11□□□□□ -0.63
TNXB-206ENST00000490077 IFNA4P05014 189 aa11.11□□□□□ -0.63
TNXB-206ENST00000490077 FBXW9Q5XUX1 488 aa11.11□□□□□ -0.63
TNXB-206ENST00000490077 C22orf34Q6ZV56 151 aa11.11□□□□□ -0.63
TNXB-206ENST00000490077 CLEC18CQ8NCF0 446 aa11.11□□□□□ -0.63
TNXB-206ENST00000490077 SNX22Q96L94 193 aa11.11□□□□□ -0.63
TNXB-206ENST00000490077 DERL1Q9BUN8 251 aa11.11□□□□□ -0.63
TNXB-206ENST00000490077 SLC25A31Q9H0C2 315 aa11.11□□□□□ -0.63
TNXB-206ENST00000490077 METTL1Q9UBP6 276 aaKnown RBP11.11□□□□□ -0.63
TNXB-206ENST00000490077 CXorf65A6NEN9 183 aa11.11□□□□□ -0.63
TNXB-206ENST00000490077 TRGC1P0CF51 173 aa11.11□□□□□ -0.63
TNXB-206ENST00000490077 HNF1AP20823 631 aa11.11□□□□□ -0.63
TNXB-206ENST00000490077 CD81P60033 236 aa11.11□□□□□ -0.63
TNXB-206ENST00000490077 ZNF506Q5JVG8 444 aa11.11□□□□□ -0.63
TNXB-206ENST00000490077 LILRB2Q8N423 598 aa11.11□□□□□ -0.63
TNXB-206ENST00000490077 KLF14Q8TD94 323 aaPredicted RBP11.11□□□□□ -0.63
TNXB-206ENST00000490077 MEGF10Q96KG7 1140 aa11.11□□□□□ -0.63
TNXB-206ENST00000490077 TRIB1Q96RU8 372 aa11.11□□□□□ -0.63
TNXB-206ENST00000490077 LINC00470Q9BZP3 86 aa11.11□□□□□ -0.63
TNXB-206ENST00000490077 ZNF391Q9UJN7 358 aa11.11□□□□□ -0.63
TNXB-206ENST00000490077 CUBNO60494 3623 aa11.11□□□□□ -0.63
TNXB-206ENST00000490077 IGF2RP11717 2491 aa11.11□□□□□ -0.63
TNXB-206ENST00000490077 MUC6Q6W4X9 2439 aa11.11□□□□□ -0.63
TNXB-206ENST00000490077 ZGRF1Q86YA3 2104 aa11.11□□□□□ -0.63
TNXB-206ENST00000490077 TANC2Q9HCD6 1990 aa11.11□□□□□ -0.63
TNXB-206ENST00000490077 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.11□□□□□ -0.63
TNXB-206ENST00000490077 TUBG1P23258 451 aa11.11□□□□□ -0.63
TNXB-206ENST00000490077 NPPCP23582 126 aa11.11□□□□□ -0.63
TNXB-206ENST00000490077 ZNF573Q86YE8 665 aa11.11□□□□□ -0.63
TNXB-206ENST00000490077 MDS2Q8NDY4 140 aa11.11□□□□□ -0.63
TNXB-206ENST00000490077 CCDC54Q8NEL0 328 aa11.11□□□□□ -0.63
TNXB-206ENST00000490077 SNRNP40Q96DI7 357 aaKnown RBP11.11□□□□□ -0.63
TNXB-206ENST00000490077 FAM122AQ96E09 287 aa11.11□□□□□ -0.63
TNXB-206ENST00000490077 ODAMA1E959 279 aa11.1□□□□□ -0.63
TNXB-206ENST00000490077 UBE2G2P60604 165 aa11.1□□□□□ -0.63
TNXB-206ENST00000490077 ERVK11-1P61568 191 aa11.1□□□□□ -0.63
TNXB-206ENST00000490077 RHEBQ15382 184 aa11.1□□□□□ -0.63
TNXB-206ENST00000490077 Q6ZS49 121 aa11.1□□□□□ -0.63
TNXB-206ENST00000490077 STX12Q86Y82 276 aa11.1□□□□□ -0.63
TNXB-206ENST00000490077 TRAV38-1A0A0B4J264 116 aa11.1□□□□□ -0.63
TNXB-206ENST00000490077 HAND1O96004 215 aa11.1□□□□□ -0.63
TNXB-206ENST00000490077 HBZP02008 142 aa11.1□□□□□ -0.63
TNXB-206ENST00000490077 GABRA2P47869 451 aa11.1□□□□□ -0.63
TNXB-206ENST00000490077 IL24Q13007 206 aa11.1□□□□□ -0.63
TNXB-206ENST00000490077 KHDC3LQ587J8 217 aa11.1□□□□□ -0.63
TNXB-206ENST00000490077 ZNF383Q8NA42 475 aa11.1□□□□□ -0.63
TNXB-206ENST00000490077 CUL9Q8IWT3 2517 aa11.09□□□□□ -0.63
TNXB-206ENST00000490077 J3QT63 122 aa11.09□□□□□ -0.63
TNXB-206ENST00000490077 IGHV2-70P01814 119 aa11.09□□□□□ -0.63
TNXB-206ENST00000490077 FABP4P15090 132 aa11.09□□□□□ -0.63
TNXB-206ENST00000490077 CD33P20138 364 aa11.09□□□□□ -0.63
TNXB-206ENST00000490077 EIF2S3P41091 472 aaKnown RBP11.09□□□□□ -0.63
TNXB-206ENST00000490077 RAB5CP51148 216 aa11.09□□□□□ -0.63
TNXB-206ENST00000490077 ADIRFQ15847 76 aa11.09□□□□□ -0.63
TNXB-206ENST00000490077 DBX2Q6ZNG2 339 aa11.09□□□□□ -0.63
TNXB-206ENST00000490077 Q8TCH9 128 aa11.09□□□□□ -0.63
TNXB-206ENST00000490077 NIPSNAP3BQ9BS92 247 aa11.09□□□□□ -0.63
TNXB-206ENST00000490077 PSG11Q9UQ72 335 aa11.09□□□□□ -0.63
TNXB-206ENST00000490077 TRGV5A0A0B4J1U4 118 aa11.09□□□□□ -0.63
TNXB-206ENST00000490077 RBMXL2O75526 392 aaKnown RBP11.09□□□□□ -0.63
TNXB-206ENST00000490077 CYC1P08574 325 aa11.09□□□□□ -0.63
TNXB-206ENST00000490077 FRMD6-AS1P0C7T7 363 aa11.09□□□□□ -0.63
TNXB-206ENST00000490077 TGFBR3Q03167 851 aa11.09□□□□□ -0.63
TNXB-206ENST00000490077 RPL39P5Q59GN2 51 aa11.09□□□□□ -0.63
TNXB-206ENST00000490077 ZNF766Q5HY98 468 aa11.09□□□□□ -0.63
TNXB-206ENST00000490077 PRR31Q5SQ13 230 aa11.09□□□□□ -0.63
TNXB-206ENST00000490077 NCR3LG1Q68D85 454 aa11.09□□□□□ -0.63
TNXB-206ENST00000490077 FAM185AQ8N0U4 392 aa11.09□□□□□ -0.63
TNXB-206ENST00000490077 FDCSPQ8NFU4 85 aa11.09□□□□□ -0.63
TNXB-206ENST00000490077 TVP23CQ96ET8 276 aa11.09□□□□□ -0.63
TNXB-206ENST00000490077 SPIN2AQ99865 258 aa11.09□□□□□ -0.63
TNXB-206ENST00000490077 SPIN2BQ9BPZ2 258 aa11.09□□□□□ -0.63
TNXB-206ENST00000490077 DCAF16Q9NXF7 216 aa11.09□□□□□ -0.63
TNXB-206ENST00000490077 B4GALT7Q9UBV7 327 aa11.09□□□□□ -0.63
TNXB-206ENST00000490077 MAP1LC3B2A6NCE7 125 aa11.08□□□□□ -0.64
TNXB-206ENST00000490077 BCL2P10415 239 aa11.08□□□□□ -0.64
TNXB-206ENST00000490077 ARR3P36575 388 aa11.08□□□□□ -0.64
TNXB-206ENST00000490077 MDH2P40926 338 aaKnown RBP11.08□□□□□ -0.64
TNXB-206ENST00000490077 ZNF134P52741 427 aa11.08□□□□□ -0.64
TNXB-206ENST00000490077 SLC38A11Q08AI6 406 aa11.08□□□□□ -0.64
TNXB-206ENST00000490077 Q3ZCU0 254 aa11.08□□□□□ -0.64
TNXB-206ENST00000490077 C9orf106Q8NAJ2 232 aa11.08□□□□□ -0.64
TNXB-206ENST00000490077 ZNF114Q8NC26 417 aa11.08□□□□□ -0.64
TNXB-206ENST00000490077 CABLES2Q9BTV7 478 aa11.08□□□□□ -0.64
TNXB-206ENST00000490077 MAP1LC3BQ9GZQ8 125 aa11.08□□□□□ -0.64
TNXB-206ENST00000490077 IFNA5P01569 189 aa11.08□□□□□ -0.64
TNXB-206ENST00000490077 OPN1MWP04001 364 aa11.08□□□□□ -0.64
TNXB-206ENST00000490077 SNRPCP09234 159 aaKnown RBP11.08□□□□□ -0.64
TNXB-206ENST00000490077 ZNF883P0CG24 379 aa11.08□□□□□ -0.64
TNXB-206ENST00000490077 OPN1MW2P0DN77 364 aa11.08□□□□□ -0.64
TNXB-206ENST00000490077 OPN1MW3P0DN78 364 aa11.08□□□□□ -0.64
TNXB-206ENST00000490077 HOXA5P20719 270 aa11.08□□□□□ -0.64
TNXB-206ENST00000490077 P2RY6Q15077 328 aa11.08□□□□□ -0.64
TNXB-206ENST00000490077 RNPS1Q15287 305 aaKnown RBP11.08□□□□□ -0.64
TNXB-206ENST00000490077 VHLLQ6RSH7 139 aa11.08□□□□□ -0.64
TNXB-206ENST00000490077 ZNRF1Q8ND25 227 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms