RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 FOXRED2Q8IWF2 684 aa12.55□□□□□ -0.4
CTDSP1-209ENST00000488627 ZNF383Q8NA42 475 aa12.55□□□□□ -0.4
CTDSP1-209ENST00000488627 DRAXINQ8NBI3 349 aaPredicted RBP12.55□□□□□ -0.4
CTDSP1-209ENST00000488627 OR4F17Q8NGA8 305 aa12.55□□□□□ -0.4
CTDSP1-209ENST00000488627 OR10J5Q8NHC4 309 aa12.55□□□□□ -0.4
CTDSP1-209ENST00000488627 NUDCD2Q8WVJ2 157 aa12.55□□□□□ -0.4
CTDSP1-209ENST00000488627 OR4F4Q96R69 305 aa12.55□□□□□ -0.4
CTDSP1-209ENST00000488627 ST6GALNAC5Q9BVH7 336 aa12.55□□□□□ -0.4
CTDSP1-209ENST00000488627 DCSTAMPQ9H295 470 aa12.55□□□□□ -0.4
CTDSP1-209ENST00000488627 ZNF107Q9UII5 783 aaPredicted RBP12.55□□□□□ -0.4
CTDSP1-209ENST00000488627 SPATA2Q9UM82 520 aa12.55□□□□□ -0.4
CTDSP1-209ENST00000488627 NBR2O15453 112 aa12.54□□□□□ -0.4
CTDSP1-209ENST00000488627 KCNAB3O43448 404 aa12.54□□□□□ -0.4
CTDSP1-209ENST00000488627 NDUFA3O95167 84 aa12.54□□□□□ -0.4
CTDSP1-209ENST00000488627 OR8U9P0C7N5 309 aa12.54□□□□□ -0.4
CTDSP1-209ENST00000488627 MC5RP33032 325 aa12.54□□□□□ -0.4
CTDSP1-209ENST00000488627 PITPNAQ00169 270 aa12.54□□□□□ -0.4
CTDSP1-209ENST00000488627 CFHR3Q02985 330 aa12.54□□□□□ -0.4
CTDSP1-209ENST00000488627 PNLIPRP3Q17RR3 467 aa12.54□□□□□ -0.4
CTDSP1-209ENST00000488627 C5orf64Q2M2E5 130 aa12.54□□□□□ -0.4
CTDSP1-209ENST00000488627 H1FOOQ8IZA3 346 aaPredicted RBP12.54□□□□□ -0.4
CTDSP1-209ENST00000488627 OR13F1Q8NGS4 319 aa12.54□□□□□ -0.4
CTDSP1-209ENST00000488627 OR8U1Q8NH10 309 aa12.54□□□□□ -0.4
CTDSP1-209ENST00000488627 C5orf30Q96GV9 206 aa12.54□□□□□ -0.4
CTDSP1-209ENST00000488627 FUNDC2Q9BWH2 189 aa12.54□□□□□ -0.4
CTDSP1-209ENST00000488627 ZNF221Q9UK13 617 aa12.54□□□□□ -0.4
CTDSP1-209ENST00000488627 ZNF580Q9UK33 172 aa12.54□□□□□ -0.4
CTDSP1-209ENST00000488627 TRAV18A0A075B6X5 111 aa12.53□□□□□ -0.4
CTDSP1-209ENST00000488627 RRP9O43818 475 aaKnown RBP12.53□□□□□ -0.4
CTDSP1-209ENST00000488627 HLA-DRB1P01911 266 aa12.53□□□□□ -0.4
CTDSP1-209ENST00000488627 IGF1P05019 195 aa12.53□□□□□ -0.4
CTDSP1-209ENST00000488627 CROCCP3Q8IVE0 287 aa12.53□□□□□ -0.4
CTDSP1-209ENST00000488627 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.53□□□□□ -0.4
CTDSP1-209ENST00000488627 WFDC9Q8NEX5 89 aa12.53□□□□□ -0.4
CTDSP1-209ENST00000488627 SDHAF2Q9NX18 166 aa12.53□□□□□ -0.4
CTDSP1-209ENST00000488627 WASHC3Q9Y3C0 194 aa12.53□□□□□ -0.4
CTDSP1-209ENST00000488627 NOTCH1P46531 2555 aa12.53□□□□□ -0.4
CTDSP1-209ENST00000488627 NOTCH3Q9UM47 2321 aa12.53□□□□□ -0.4
CTDSP1-209ENST00000488627 A0A0A6YYH2 397 aa12.52□□□□□ -0.41
CTDSP1-209ENST00000488627 IGHV7-81A0A0B4J1V7 117 aa12.52□□□□□ -0.41
CTDSP1-209ENST00000488627 A6NJ64 397 aa12.52□□□□□ -0.41
CTDSP1-209ENST00000488627 IGKV1-16P04430 117 aa12.52□□□□□ -0.41
CTDSP1-209ENST00000488627 TFAP2AP05549 437 aa12.52□□□□□ -0.41
CTDSP1-209ENST00000488627 NCS1P62166 190 aa12.52□□□□□ -0.41
CTDSP1-209ENST00000488627 DEFA6Q01524 100 aa12.52□□□□□ -0.41
CTDSP1-209ENST00000488627 LIN54Q6MZP7 749 aa12.52□□□□□ -0.41
CTDSP1-209ENST00000488627 COMMD1Q8N668 190 aa12.52□□□□□ -0.41
CTDSP1-209ENST00000488627 RNF5Q99942 180 aa12.52□□□□□ -0.41
CTDSP1-209ENST00000488627 OR2D2Q9H210 308 aa12.52□□□□□ -0.41
CTDSP1-209ENST00000488627 M0R1X1 148 aa12.51□□□□□ -0.41
CTDSP1-209ENST00000488627 FCN1O00602 326 aa12.51□□□□□ -0.41
CTDSP1-209ENST00000488627 RRHO14718 337 aa12.51□□□□□ -0.41
CTDSP1-209ENST00000488627 WIPF1O43516 503 aa12.51□□□□□ -0.41
CTDSP1-209ENST00000488627 RBBP9O75884 186 aa12.51□□□□□ -0.41
CTDSP1-209ENST00000488627 CTXN2P0C2S0 81 aa12.51□□□□□ -0.41
CTDSP1-209ENST00000488627 GNG2P59768 71 aa12.51□□□□□ -0.41
CTDSP1-209ENST00000488627 RPL23AP62750 156 aaKnown RBP12.51□□□□□ -0.41
CTDSP1-209ENST00000488627 SLC35B1P78383 322 aa12.51□□□□□ -0.41
CTDSP1-209ENST00000488627 C18orf65Q6ZTR6 163 aa12.51□□□□□ -0.41
CTDSP1-209ENST00000488627 RNF152Q8N8N0 203 aa12.51□□□□□ -0.41
CTDSP1-209ENST00000488627 SLC25A46Q96AG3 418 aa12.51□□□□□ -0.41
CTDSP1-209ENST00000488627 GINS4Q9BRT9 223 aa12.51□□□□□ -0.41
CTDSP1-209ENST00000488627 OR51J1Q9H342 316 aa12.51□□□□□ -0.41
CTDSP1-209ENST00000488627 FBXL15Q9H469 300 aa12.51□□□□□ -0.41
CTDSP1-209ENST00000488627 AUNIPQ9H7T9 357 aa12.51□□□□□ -0.41
CTDSP1-209ENST00000488627 ZFP57Q9NU63 452 aa12.51□□□□□ -0.41
CTDSP1-209ENST00000488627 G3V4G9 280 aa12.5□□□□□ -0.41
CTDSP1-209ENST00000488627 H7C2Y5 167 aa12.5□□□□□ -0.41
CTDSP1-209ENST00000488627 IGHG4P01861 327 aa12.5□□□□□ -0.41
CTDSP1-209ENST00000488627 PTHLHP12272 177 aa12.5□□□□□ -0.41
CTDSP1-209ENST00000488627 PPIFP30405 207 aaKnown RBP12.5□□□□□ -0.41
CTDSP1-209ENST00000488627 VBP1P61758 197 aa12.5□□□□□ -0.41
CTDSP1-209ENST00000488627 NDPQ00604 133 aa12.5□□□□□ -0.41
CTDSP1-209ENST00000488627 SAMD5Q5TGI4 173 aa12.5□□□□□ -0.41
CTDSP1-209ENST00000488627 TEX38Q6PEX7 206 aa12.5□□□□□ -0.41
CTDSP1-209ENST00000488627 CNIH2Q6PI25 160 aa12.5□□□□□ -0.41
CTDSP1-209ENST00000488627 C1QL4Q86Z23 238 aa12.5□□□□□ -0.41
CTDSP1-209ENST00000488627 GVQW1Q8N7I0 195 aa12.5□□□□□ -0.41
CTDSP1-209ENST00000488627 NAA50Q9GZZ1 169 aaKnown RBP12.5□□□□□ -0.41
CTDSP1-209ENST00000488627 DIABLOQ9NR28 239 aa12.5□□□□□ -0.41
CTDSP1-209ENST00000488627 ANXA10Q9UJ72 324 aa12.5□□□□□ -0.41
CTDSP1-209ENST00000488627 G3V318 75 aa12.49□□□□□ -0.41
CTDSP1-209ENST00000488627 ATP6V0E1O15342 81 aa12.49□□□□□ -0.41
CTDSP1-209ENST00000488627 XRCC3O43542 346 aa12.49□□□□□ -0.41
CTDSP1-209ENST00000488627 EGR2P11161 476 aaPredicted RBP12.49□□□□□ -0.41
CTDSP1-209ENST00000488627 NFYAP23511 347 aaPredicted RBP12.49□□□□□ -0.41
CTDSP1-209ENST00000488627 FOXE3Q13461 319 aa12.49□□□□□ -0.41
CTDSP1-209ENST00000488627 PSG5Q15238 335 aa12.49□□□□□ -0.41
CTDSP1-209ENST00000488627 KHDC1LQ5JSQ8 128 aa12.49□□□□□ -0.41
CTDSP1-209ENST00000488627 ETV3LQ6ZN32 361 aa12.49□□□□□ -0.41
CTDSP1-209ENST00000488627 LCNL1Q6ZST4 164 aa12.49□□□□□ -0.41
CTDSP1-209ENST00000488627 ANKRD13BQ86YJ7 626 aa12.49□□□□□ -0.41
CTDSP1-209ENST00000488627 PDPNQ86YL7 162 aa12.49□□□□□ -0.41
CTDSP1-209ENST00000488627 GON7Q9BXV9 100 aa12.49□□□□□ -0.41
CTDSP1-209ENST00000488627 KIAA1456Q9P272 454 aa12.49□□□□□ -0.41
CTDSP1-209ENST00000488627 FBXO7Q9Y3I1 522 aa12.49□□□□□ -0.41
CTDSP1-209ENST00000488627 OR2W1Q9Y3N9 320 aa12.49□□□□□ -0.41
CTDSP1-209ENST00000488627 TUSC2O75896 110 aa12.48□□□□□ -0.41
CTDSP1-209ENST00000488627 IGLV2-14P01704 120 aa12.48□□□□□ -0.41
CTDSP1-209ENST00000488627 IGLV2-23P01705 113 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms