RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 CFHR3Q02985 330 aa11.18□□□□□ -0.62
COL9A2-208ENST00000488463 KIR2DS1Q14954 304 aa11.18□□□□□ -0.62
COL9A2-208ENST00000488463 GLDNQ6ZMI3 551 aaPredicted RBP11.18□□□□□ -0.62
COL9A2-208ENST00000488463 ZNF329Q86UD4 541 aa11.18□□□□□ -0.62
COL9A2-208ENST00000488463 STPG2Q8N412 459 aa11.18□□□□□ -0.62
COL9A2-208ENST00000488463 NPBQ8NG41 125 aa11.18□□□□□ -0.62
COL9A2-208ENST00000488463 OR5AN1Q8NGI8 311 aa11.18□□□□□ -0.62
COL9A2-208ENST00000488463 RHBDL2Q9NX52 303 aa11.18□□□□□ -0.62
COL9A2-208ENST00000488463 ZNF107Q9UII5 783 aaPredicted RBP11.18□□□□□ -0.62
COL9A2-208ENST00000488463 RNF150Q9ULK6 438 aa11.18□□□□□ -0.62
COL9A2-208ENST00000488463 PSMB11A5LHX3 300 aa11.17□□□□□ -0.62
COL9A2-208ENST00000488463 TMEM235A6NFC5 223 aa11.17□□□□□ -0.62
COL9A2-208ENST00000488463 TMEM127O75204 238 aa11.17□□□□□ -0.62
COL9A2-208ENST00000488463 NDUFA3O95167 84 aa11.17□□□□□ -0.62
COL9A2-208ENST00000488463 GSTP1P09211 210 aaKnown RBP11.17□□□□□ -0.62
COL9A2-208ENST00000488463 DTYMKP23919 212 aa11.17□□□□□ -0.62
COL9A2-208ENST00000488463 RPS19P39019 145 aaKnown RBP11.17□□□□□ -0.62
COL9A2-208ENST00000488463 ARL6IP1Q15041 203 aa11.17□□□□□ -0.62
COL9A2-208ENST00000488463 IDNKQ5T6J7 187 aa11.17□□□□□ -0.62
COL9A2-208ENST00000488463 FAM131AQ6UXB0 335 aa11.17□□□□□ -0.62
COL9A2-208ENST00000488463 CHPT1Q8WUD6 406 aa11.17□□□□□ -0.62
COL9A2-208ENST00000488463 NUDCD2Q8WVJ2 157 aa11.17□□□□□ -0.62
COL9A2-208ENST00000488463 ISOC1Q96CN7 298 aa11.17□□□□□ -0.62
COL9A2-208ENST00000488463 R3HDM4Q96D70 268 aa11.17□□□□□ -0.62
COL9A2-208ENST00000488463 ZNF580Q9UK33 172 aa11.17□□□□□ -0.62
COL9A2-208ENST00000488463 TSSC4Q9Y5U2 329 aaPredicted RBP11.17□□□□□ -0.62
COL9A2-208ENST00000488463 ETV7Q9Y603 341 aa11.17□□□□□ -0.62
COL9A2-208ENST00000488463 CEPT1Q9Y6K0 416 aa11.17□□□□□ -0.62
COL9A2-208ENST00000488463 TNCP24821 2201 aa11.16□□□□□ -0.62
COL9A2-208ENST00000488463 TCRBV4S1A1TA0A5B7 111 aa11.16□□□□□ -0.62
COL9A2-208ENST00000488463 OR5H14A6NHG9 310 aa11.16□□□□□ -0.62
COL9A2-208ENST00000488463 AP4M1O00189 453 aa11.16□□□□□ -0.62
COL9A2-208ENST00000488463 BET1O15155 118 aa11.16□□□□□ -0.62
COL9A2-208ENST00000488463 HLA-DRB1P01911 266 aa11.16□□□□□ -0.62
COL9A2-208ENST00000488463 IGF1P05019 195 aa11.16□□□□□ -0.62
COL9A2-208ENST00000488463 RORCP51449 518 aa11.16□□□□□ -0.62
COL9A2-208ENST00000488463 VBP1P61758 197 aa11.16□□□□□ -0.62
COL9A2-208ENST00000488463 MRPS15P82914 257 aaKnown RBP11.16□□□□□ -0.62
COL9A2-208ENST00000488463 ARFRP1Q13795 201 aa11.16□□□□□ -0.62
COL9A2-208ENST00000488463 MMDQ15546 238 aa11.16□□□□□ -0.62
COL9A2-208ENST00000488463 C5orf64Q2M2E5 130 aa11.16□□□□□ -0.62
COL9A2-208ENST00000488463 H1FOOQ8IZA3 346 aaPredicted RBP11.16□□□□□ -0.62
COL9A2-208ENST00000488463 RNF152Q8N8N0 203 aa11.16□□□□□ -0.62
COL9A2-208ENST00000488463 ZNF383Q8NA42 475 aa11.16□□□□□ -0.62
COL9A2-208ENST00000488463 DRAXINQ8NBI3 349 aaPredicted RBP11.16□□□□□ -0.62
COL9A2-208ENST00000488463 OR4X2Q8NGF9 303 aa11.16□□□□□ -0.62
COL9A2-208ENST00000488463 PHF21AQ96BD5 680 aa11.16□□□□□ -0.62
COL9A2-208ENST00000488463 RASL11BQ9BPW5 248 aa11.16□□□□□ -0.62
COL9A2-208ENST00000488463 GAB2Q9UQC2 676 aa11.16□□□□□ -0.62
COL9A2-208ENST00000488463 IGHV7-81A0A0B4J1V7 117 aa11.15□□□□□ -0.62
COL9A2-208ENST00000488463 A0A1W2PRX2 142 aa11.15□□□□□ -0.62
COL9A2-208ENST00000488463 NBR2O15453 112 aa11.15□□□□□ -0.62
COL9A2-208ENST00000488463 SCGNO76038 276 aa11.15□□□□□ -0.62
COL9A2-208ENST00000488463 OR8U9P0C7N5 309 aa11.15□□□□□ -0.62
COL9A2-208ENST00000488463 CTF1Q16619 201 aa11.15□□□□□ -0.62
COL9A2-208ENST00000488463 PDLIM3Q53GG5 364 aaPredicted RBP11.15□□□□□ -0.62
COL9A2-208ENST00000488463 SAMD5Q5TGI4 173 aa11.15□□□□□ -0.62
COL9A2-208ENST00000488463 C18orf65Q6ZTR6 163 aa11.15□□□□□ -0.62
COL9A2-208ENST00000488463 FOXRED2Q8IWF2 684 aa11.15□□□□□ -0.62
COL9A2-208ENST00000488463 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.15□□□□□ -0.62
COL9A2-208ENST00000488463 WFDC9Q8NEX5 89 aa11.15□□□□□ -0.62
COL9A2-208ENST00000488463 OR4F17Q8NGA8 305 aa11.15□□□□□ -0.62
COL9A2-208ENST00000488463 OR8U1Q8NH10 309 aa11.15□□□□□ -0.62
COL9A2-208ENST00000488463 OR10J5Q8NHC4 309 aa11.15□□□□□ -0.62
COL9A2-208ENST00000488463 AP3S1Q92572 193 aa11.15□□□□□ -0.62
COL9A2-208ENST00000488463 OR4F4Q96R69 305 aa11.15□□□□□ -0.62
COL9A2-208ENST00000488463 DCSTAMPQ9H295 470 aa11.15□□□□□ -0.62
COL9A2-208ENST00000488463 SDHAF2Q9NX18 166 aa11.15□□□□□ -0.62
COL9A2-208ENST00000488463 SPATA2Q9UM82 520 aa11.15□□□□□ -0.62
COL9A2-208ENST00000488463 A0A0A6YYH2 397 aa11.14□□□□□ -0.63
COL9A2-208ENST00000488463 A6NHS1 94 aa11.14□□□□□ -0.63
COL9A2-208ENST00000488463 A6NJ64 397 aa11.14□□□□□ -0.63
COL9A2-208ENST00000488463 G3V4G9 280 aa11.14□□□□□ -0.63
COL9A2-208ENST00000488463 IGKV1-16P04430 117 aa11.14□□□□□ -0.63
COL9A2-208ENST00000488463 MC5RP33032 325 aa11.14□□□□□ -0.63
COL9A2-208ENST00000488463 TALDO1P37837 337 aa11.14□□□□□ -0.63
COL9A2-208ENST00000488463 NCS1P62166 190 aa11.14□□□□□ -0.63
COL9A2-208ENST00000488463 RPL23AP62750 156 aaKnown RBP11.14□□□□□ -0.63
COL9A2-208ENST00000488463 NDPQ00604 133 aa11.14□□□□□ -0.63
COL9A2-208ENST00000488463 DEFA6Q01524 100 aa11.14□□□□□ -0.63
COL9A2-208ENST00000488463 PNLIPRP3Q17RR3 467 aa11.14□□□□□ -0.63
COL9A2-208ENST00000488463 KPRPQ5T749 579 aaPredicted RBP11.14□□□□□ -0.63
COL9A2-208ENST00000488463 ETV3LQ6ZN32 361 aa11.14□□□□□ -0.63
COL9A2-208ENST00000488463 NAA50Q9GZZ1 169 aaKnown RBP11.14□□□□□ -0.63
COL9A2-208ENST00000488463 WASHC3Q9Y3C0 194 aa11.14□□□□□ -0.63
COL9A2-208ENST00000488463 H3BMQ9 156 aa11.13□□□□□ -0.63
COL9A2-208ENST00000488463 FCN1O00602 326 aa11.13□□□□□ -0.63
COL9A2-208ENST00000488463 RRHO14718 337 aa11.13□□□□□ -0.63
COL9A2-208ENST00000488463 RBBP9O75884 186 aa11.13□□□□□ -0.63
COL9A2-208ENST00000488463 IGHG4P01861 327 aa11.13□□□□□ -0.63
COL9A2-208ENST00000488463 PPIFP30405 207 aaKnown RBP11.13□□□□□ -0.63
COL9A2-208ENST00000488463 PITPNAQ00169 270 aa11.13□□□□□ -0.63
COL9A2-208ENST00000488463 BEAN1Q3B7T3 259 aa11.13□□□□□ -0.63
COL9A2-208ENST00000488463 C19orf54Q5BKX5 351 aa11.13□□□□□ -0.63
COL9A2-208ENST00000488463 MZT2AQ6P582 158 aa11.13□□□□□ -0.63
COL9A2-208ENST00000488463 C1QL4Q86Z23 238 aa11.13□□□□□ -0.63
COL9A2-208ENST00000488463 COMMD1Q8N668 190 aa11.13□□□□□ -0.63
COL9A2-208ENST00000488463 SLC25A46Q96AG3 418 aa11.13□□□□□ -0.63
COL9A2-208ENST00000488463 RNF5Q99942 180 aa11.13□□□□□ -0.63
COL9A2-208ENST00000488463 ST6GALNAC5Q9BVH7 336 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms