RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 S100A16Q96FQ6 103 aaKnown RBP9.9□□□□□ -0.82
PTCD1-205ENST00000485746 CABLES2Q9BTV7 478 aa9.9□□□□□ -0.82
PTCD1-205ENST00000485746 FUNDC2Q9BWH2 189 aa9.9□□□□□ -0.82
PTCD1-205ENST00000485746 OR2D2Q9H210 308 aa9.9□□□□□ -0.82
PTCD1-205ENST00000485746 DCSTAMPQ9H295 470 aa9.9□□□□□ -0.82
PTCD1-205ENST00000485746 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.9□□□□□ -0.82
PTCD1-205ENST00000485746 ZNF107Q9UII5 783 aaPredicted RBP9.9□□□□□ -0.82
PTCD1-205ENST00000485746 WASHC3Q9Y3C0 194 aa9.9□□□□□ -0.82
PTCD1-205ENST00000485746 FBN3Q75N90 2809 aa9.9□□□□□ -0.82
PTCD1-205ENST00000485746 TRBV6-7A0A0A0MS04 114 aa9.89□□□□□ -0.83
PTCD1-205ENST00000485746 A0A0A6YYH2 397 aa9.89□□□□□ -0.83
PTCD1-205ENST00000485746 A6NJ64 397 aa9.89□□□□□ -0.83
PTCD1-205ENST00000485746 LINC01548A6NM66 108 aa9.89□□□□□ -0.83
PTCD1-205ENST00000485746 NUDT19A8MXV4 375 aa9.89□□□□□ -0.83
PTCD1-205ENST00000485746 PF4P02776 101 aa9.89□□□□□ -0.83
PTCD1-205ENST00000485746 VDAC1P21796 283 aa9.89□□□□□ -0.83
PTCD1-205ENST00000485746 CNTFRP26992 372 aa9.89□□□□□ -0.83
PTCD1-205ENST00000485746 RPS19P39019 145 aaKnown RBP9.89□□□□□ -0.83
PTCD1-205ENST00000485746 RPS16P62249 146 aaKnown RBP9.89□□□□□ -0.83
PTCD1-205ENST00000485746 LIN54Q6MZP7 749 aa9.89□□□□□ -0.83
PTCD1-205ENST00000485746 COMMD1Q8N668 190 aa9.89□□□□□ -0.83
PTCD1-205ENST00000485746 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.89□□□□□ -0.83
PTCD1-205ENST00000485746 RITA1Q96K30 269 aa9.89□□□□□ -0.83
PTCD1-205ENST00000485746 AGMATQ9BSE5 352 aa9.89□□□□□ -0.83
PTCD1-205ENST00000485746 TRIM64CA6NLI5 447 aa9.88□□□□□ -0.83
PTCD1-205ENST00000485746 H0YJW9 148 aa9.88□□□□□ -0.83
PTCD1-205ENST00000485746 RBBP9O75884 186 aa9.88□□□□□ -0.83
PTCD1-205ENST00000485746 DIRAS3O95661 229 aa9.88□□□□□ -0.83
PTCD1-205ENST00000485746 ARPC4P59998 168 aa9.88□□□□□ -0.83
PTCD1-205ENST00000485746 VBP1P61758 197 aa9.88□□□□□ -0.83
PTCD1-205ENST00000485746 C5orf64Q2M2E5 130 aa9.88□□□□□ -0.83
PTCD1-205ENST00000485746 UBE2NLQ5JXB2 153 aa9.88□□□□□ -0.83
PTCD1-205ENST00000485746 TEX38Q6PEX7 206 aa9.88□□□□□ -0.83
PTCD1-205ENST00000485746 CNIH2Q6PI25 160 aa9.88□□□□□ -0.83
PTCD1-205ENST00000485746 Q6ZS49 121 aa9.88□□□□□ -0.83
PTCD1-205ENST00000485746 FAM71E2Q8N5Q1 922 aa9.88□□□□□ -0.83
PTCD1-205ENST00000485746 ABHD5Q8WTS1 349 aa9.88□□□□□ -0.83
PTCD1-205ENST00000485746 SLC25A38Q96DW6 304 aa9.88□□□□□ -0.83
PTCD1-205ENST00000485746 TSNAXQ99598 290 aaKnown RBP9.88□□□□□ -0.83
PTCD1-205ENST00000485746 HSPB9Q9BQS6 159 aa9.88□□□□□ -0.83
PTCD1-205ENST00000485746 MRPS26Q9BYN8 205 aaKnown RBP9.88□□□□□ -0.83
PTCD1-205ENST00000485746 TOLLIPQ9H0E2 274 aa9.88□□□□□ -0.83
PTCD1-205ENST00000485746 PARP11Q9NR21 331 aa9.88□□□□□ -0.83
PTCD1-205ENST00000485746 SLC35D1Q9NTN3 355 aa9.88□□□□□ -0.83
PTCD1-205ENST00000485746 TET2Q6N021 2002 aaPredicted RBP9.87□□□□□ -0.83
PTCD1-205ENST00000485746 IGKV1D-8A0A087WSZ0 117 aa9.87□□□□□ -0.83
PTCD1-205ENST00000485746 RRHO14718 337 aa9.87□□□□□ -0.83
PTCD1-205ENST00000485746 CD33P20138 364 aa9.87□□□□□ -0.83
PTCD1-205ENST00000485746 NFYAP23511 347 aaPredicted RBP9.87□□□□□ -0.83
PTCD1-205ENST00000485746 LUMP51884 338 aaPredicted RBP9.87□□□□□ -0.83
PTCD1-205ENST00000485746 NCS1P62166 190 aa9.87□□□□□ -0.83
PTCD1-205ENST00000485746 DEFA6Q01524 100 aa9.87□□□□□ -0.83
PTCD1-205ENST00000485746 TCTEX1D4Q5JR98 221 aa9.87□□□□□ -0.83
PTCD1-205ENST00000485746 CXorf66Q5JRM2 361 aaPredicted RBP9.87□□□□□ -0.83
PTCD1-205ENST00000485746 H1FOOQ8IZA3 346 aaPredicted RBP9.87□□□□□ -0.83
PTCD1-205ENST00000485746 SAMD12Q8N8I0 201 aa9.87□□□□□ -0.83
PTCD1-205ENST00000485746 NPBQ8NG41 125 aa9.87□□□□□ -0.83
PTCD1-205ENST00000485746 OR5AN1Q8NGI8 311 aa9.87□□□□□ -0.83
PTCD1-205ENST00000485746 OR13F1Q8NGS4 319 aa9.87□□□□□ -0.83
PTCD1-205ENST00000485746 FLYWCH2Q96CP2 140 aaKnown RBP9.87□□□□□ -0.83
PTCD1-205ENST00000485746 CLCC1Q96S66 551 aa9.87□□□□□ -0.83
PTCD1-205ENST00000485746 RNF5Q99942 180 aa9.87□□□□□ -0.83
PTCD1-205ENST00000485746 FBXL15Q9H469 300 aa9.87□□□□□ -0.83
PTCD1-205ENST00000485746 IFT46Q9NQC8 304 aa9.87□□□□□ -0.83
PTCD1-205ENST00000485746 SDHAF2Q9NX18 166 aa9.87□□□□□ -0.83
PTCD1-205ENST00000485746 COMMD3Q9UBI1 195 aa9.87□□□□□ -0.83
PTCD1-205ENST00000485746 SMIM31A0A1B0GVY4 71 aa9.86□□□□□ -0.83
PTCD1-205ENST00000485746 ADARB2-AS1A8MUL3 147 aa9.86□□□□□ -0.83
PTCD1-205ENST00000485746 SSX5O60225 188 aa9.86□□□□□ -0.83
PTCD1-205ENST00000485746 HLA-DRB1P01911 266 aa9.86□□□□□ -0.83
PTCD1-205ENST00000485746 FCER2P06734 321 aa9.86□□□□□ -0.83
PTCD1-205ENST00000485746 SMIM18P0DKX4 95 aa9.86□□□□□ -0.83
PTCD1-205ENST00000485746 OR5H8P0DN80 308 aa9.86□□□□□ -0.83
PTCD1-205ENST00000485746 CBX5P45973 191 aa9.86□□□□□ -0.83
PTCD1-205ENST00000485746 THBS3P49746 956 aa9.86□□□□□ -0.83
PTCD1-205ENST00000485746 RORCP51449 518 aa9.86□□□□□ -0.83
PTCD1-205ENST00000485746 LINC00205P59089 165 aa9.86□□□□□ -0.83
PTCD1-205ENST00000485746 TAGLNQ01995 201 aaKnown RBP9.86□□□□□ -0.83
PTCD1-205ENST00000485746 RTL8BQ17RB0 113 aa9.86□□□□□ -0.83
PTCD1-205ENST00000485746 TMEM69Q5SWH9 247 aa9.86□□□□□ -0.83
PTCD1-205ENST00000485746 GPR107Q5VW38 600 aa9.86□□□□□ -0.83
PTCD1-205ENST00000485746 TMEM65Q6PI78 240 aa9.86□□□□□ -0.83
PTCD1-205ENST00000485746 GPR141Q7Z602 305 aa9.86□□□□□ -0.83
PTCD1-205ENST00000485746 PDPNQ86YL7 162 aa9.86□□□□□ -0.83
PTCD1-205ENST00000485746 C1QL4Q86Z23 238 aa9.86□□□□□ -0.83
PTCD1-205ENST00000485746 ZNF383Q8NA42 475 aa9.86□□□□□ -0.83
PTCD1-205ENST00000485746 BEST4Q8NFU0 473 aa9.86□□□□□ -0.83
PTCD1-205ENST00000485746 SLC25A46Q96AG3 418 aa9.86□□□□□ -0.83
PTCD1-205ENST00000485746 KCTD12Q96CX2 325 aaKnown RBP9.86□□□□□ -0.83
PTCD1-205ENST00000485746 OR51J1Q9H342 316 aa9.86□□□□□ -0.83
PTCD1-205ENST00000485746 AUNIPQ9H7T9 357 aa9.86□□□□□ -0.83
PTCD1-205ENST00000485746 ZFP57Q9NU63 452 aa9.86□□□□□ -0.83
PTCD1-205ENST00000485746 METTL1Q9UBP6 276 aaKnown RBP9.86□□□□□ -0.83
PTCD1-205ENST00000485746 ANXA10Q9UJ72 324 aa9.86□□□□□ -0.83
PTCD1-205ENST00000485746 GAB2Q9UQC2 676 aa9.86□□□□□ -0.83
PTCD1-205ENST00000485746 WSB1Q9Y6I7 421 aa9.86□□□□□ -0.83
PTCD1-205ENST00000485746 MEIS3P1A6NDR6 274 aa9.85□□□□□ -0.83
PTCD1-205ENST00000485746 XRCC3O43542 346 aa9.85□□□□□ -0.83
PTCD1-205ENST00000485746 TUSC2O75896 110 aa9.85□□□□□ -0.83
PTCD1-205ENST00000485746 SLC22A5O76082 557 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms