RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 NDUFA11Q86Y39 141 aa12.31□□□□□ -0.44
HMGA1-206ENST00000478214 DRAXINQ8NBI3 349 aaPredicted RBP12.31□□□□□ -0.44
HMGA1-206ENST00000478214 OR5AN1Q8NGI8 311 aa12.31□□□□□ -0.44
HMGA1-206ENST00000478214 SLC25A46Q96AG3 418 aa12.31□□□□□ -0.44
HMGA1-206ENST00000478214 HSPB9Q9BQS6 159 aa12.31□□□□□ -0.44
HMGA1-206ENST00000478214 GINS4Q9BRT9 223 aa12.31□□□□□ -0.44
HMGA1-206ENST00000478214 MRPS26Q9BYN8 205 aaKnown RBP12.31□□□□□ -0.44
HMGA1-206ENST00000478214 DCSTAMPQ9H295 470 aa12.31□□□□□ -0.44
HMGA1-206ENST00000478214 A0A1W2PRX2 142 aa12.3□□□□□ -0.44
HMGA1-206ENST00000478214 TCRBV4S1A1TA0A5B7 111 aa12.3□□□□□ -0.44
HMGA1-206ENST00000478214 PSMB11A5LHX3 300 aa12.3□□□□□ -0.44
HMGA1-206ENST00000478214 OR5H14A6NHG9 310 aa12.3□□□□□ -0.44
HMGA1-206ENST00000478214 FOXRED2Q8IWF2 684 aa12.3□□□□□ -0.44
HMGA1-206ENST00000478214 H1FOOQ8IZA3 346 aaPredicted RBP12.3□□□□□ -0.44
HMGA1-206ENST00000478214 ZNF383Q8NA42 475 aa12.3□□□□□ -0.44
HMGA1-206ENST00000478214 OR4X2Q8NGF9 303 aa12.3□□□□□ -0.44
HMGA1-206ENST00000478214 CHPT1Q8WUD6 406 aa12.3□□□□□ -0.44
HMGA1-206ENST00000478214 OR2D2Q9H210 308 aa12.3□□□□□ -0.44
HMGA1-206ENST00000478214 AUNIPQ9H7T9 357 aa12.3□□□□□ -0.44
HMGA1-206ENST00000478214 DIABLOQ9NR28 239 aa12.3□□□□□ -0.44
HMGA1-206ENST00000478214 H7C2Y5 167 aa12.29□□□□□ -0.44
HMGA1-206ENST00000478214 M0R1X1 148 aa12.29□□□□□ -0.44
HMGA1-206ENST00000478214 AP4M1O00189 453 aa12.29□□□□□ -0.44
HMGA1-206ENST00000478214 NBR2O15453 112 aa12.29□□□□□ -0.44
HMGA1-206ENST00000478214 TFAP2AP05549 437 aa12.29□□□□□ -0.44
HMGA1-206ENST00000478214 PTHLHP12272 177 aa12.29□□□□□ -0.44
HMGA1-206ENST00000478214 MC5RP33032 325 aa12.29□□□□□ -0.44
HMGA1-206ENST00000478214 SOX6P35712 828 aa12.29□□□□□ -0.44
HMGA1-206ENST00000478214 UBE2NLQ5JXB2 153 aa12.29□□□□□ -0.44
HMGA1-206ENST00000478214 ANKRD13BQ86YJ7 626 aa12.29□□□□□ -0.44
HMGA1-206ENST00000478214 STPG2Q8N412 459 aa12.29□□□□□ -0.44
HMGA1-206ENST00000478214 SAMD12Q8N8I0 201 aa12.29□□□□□ -0.44
HMGA1-206ENST00000478214 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.29□□□□□ -0.44
HMGA1-206ENST00000478214 NPBQ8NG41 125 aa12.29□□□□□ -0.44
HMGA1-206ENST00000478214 R3HDM4Q96D70 268 aa12.29□□□□□ -0.44
HMGA1-206ENST00000478214 C5orf30Q96GV9 206 aa12.29□□□□□ -0.44
HMGA1-206ENST00000478214 SDHAF2Q9NX18 166 aa12.29□□□□□ -0.44
HMGA1-206ENST00000478214 WASHC3Q9Y3C0 194 aa12.29□□□□□ -0.44
HMGA1-206ENST00000478214 RBM7Q9Y580 266 aaKnown RBP12.29□□□□□ -0.44
HMGA1-206ENST00000478214 MEGF8Q7Z7M0 2845 aa12.29□□□□□ -0.44
HMGA1-206ENST00000478214 KCNAB3O43448 404 aa12.28□□□□□ -0.44
HMGA1-206ENST00000478214 XRCC3O43542 346 aa12.28□□□□□ -0.44
HMGA1-206ENST00000478214 GABARAPO95166 117 aa12.28□□□□□ -0.44
HMGA1-206ENST00000478214 OPN1MWP04001 364 aa12.28□□□□□ -0.44
HMGA1-206ENST00000478214 CTXN2P0C2S0 81 aa12.28□□□□□ -0.44
HMGA1-206ENST00000478214 OPN1MW2P0DN77 364 aa12.28□□□□□ -0.44
HMGA1-206ENST00000478214 OPN1MW3P0DN78 364 aa12.28□□□□□ -0.44
HMGA1-206ENST00000478214 ALDH3B2P48448 385 aa12.28□□□□□ -0.44
HMGA1-206ENST00000478214 CTF1Q16619 201 aa12.28□□□□□ -0.44
HMGA1-206ENST00000478214 C5orf64Q2M2E5 130 aa12.28□□□□□ -0.44
HMGA1-206ENST00000478214 GPR107Q5VW38 600 aa12.28□□□□□ -0.44
HMGA1-206ENST00000478214 CNIH2Q6PI25 160 aa12.28□□□□□ -0.44
HMGA1-206ENST00000478214 GVQW1Q8N7I0 195 aa12.28□□□□□ -0.44
HMGA1-206ENST00000478214 KCTD12Q96CX2 325 aaKnown RBP12.28□□□□□ -0.44
HMGA1-206ENST00000478214 S100A16Q96FQ6 103 aaKnown RBP12.28□□□□□ -0.44
HMGA1-206ENST00000478214 ZNF107Q9UII5 783 aaPredicted RBP12.28□□□□□ -0.44
HMGA1-206ENST00000478214 ANXA10Q9UJ72 324 aa12.28□□□□□ -0.44
HMGA1-206ENST00000478214 GAB2Q9UQC2 676 aa12.28□□□□□ -0.44
HMGA1-206ENST00000478214 TSSC4Q9Y5U2 329 aaPredicted RBP12.28□□□□□ -0.44
HMGA1-206ENST00000478214 NOTCH1P46531 2555 aa12.27□□□□□ -0.44
HMGA1-206ENST00000478214 J3QRK9 145 aa12.27□□□□□ -0.45
HMGA1-206ENST00000478214 NDUFA3O95167 84 aa12.27□□□□□ -0.45
HMGA1-206ENST00000478214 NFYAP23511 347 aaPredicted RBP12.27□□□□□ -0.45
HMGA1-206ENST00000478214 KHDC1LQ5JSQ8 128 aa12.27□□□□□ -0.45
HMGA1-206ENST00000478214 BEST4Q8NFU0 473 aa12.27□□□□□ -0.45
HMGA1-206ENST00000478214 FBXL15Q9H469 300 aa12.27□□□□□ -0.45
HMGA1-206ENST00000478214 KIAA1456Q9P272 454 aa12.27□□□□□ -0.45
HMGA1-206ENST00000478214 COMMD3Q9UBI1 195 aa12.27□□□□□ -0.45
HMGA1-206ENST00000478214 RBBP9O75884 186 aa12.26□□□□□ -0.45
HMGA1-206ENST00000478214 HLA-DRB1P01911 266 aa12.26□□□□□ -0.45
HMGA1-206ENST00000478214 APOA2P02652 100 aa12.26□□□□□ -0.45
HMGA1-206ENST00000478214 IGKV1-16P04430 117 aa12.26□□□□□ -0.45
HMGA1-206ENST00000478214 FCER2P06734 321 aa12.26□□□□□ -0.45
HMGA1-206ENST00000478214 SLC35B1P78383 322 aa12.26□□□□□ -0.45
HMGA1-206ENST00000478214 LIN54Q6MZP7 749 aa12.26□□□□□ -0.45
HMGA1-206ENST00000478214 GPR141Q7Z602 305 aa12.26□□□□□ -0.45
HMGA1-206ENST00000478214 HOGA1Q86XE5 327 aa12.26□□□□□ -0.45
HMGA1-206ENST00000478214 OR4F17Q8NGA8 305 aa12.26□□□□□ -0.45
HMGA1-206ENST00000478214 OR4F4Q96R69 305 aa12.26□□□□□ -0.45
HMGA1-206ENST00000478214 SLC35D1Q9NTN3 355 aa12.26□□□□□ -0.45
HMGA1-206ENST00000478214 IGHV7-81A0A0B4J1V7 117 aa12.25□□□□□ -0.45
HMGA1-206ENST00000478214 MEIS3P1A6NDR6 274 aa12.25□□□□□ -0.45
HMGA1-206ENST00000478214 RRHO14718 337 aa12.25□□□□□ -0.45
HMGA1-206ENST00000478214 EIF4EP06730 217 aaKnown RBP12.25□□□□□ -0.45
HMGA1-206ENST00000478214 TAS2R20P59543 309 aa12.25□□□□□ -0.45
HMGA1-206ENST00000478214 ARPC4P59998 168 aa12.25□□□□□ -0.45
HMGA1-206ENST00000478214 RPS16P62249 146 aaKnown RBP12.25□□□□□ -0.45
HMGA1-206ENST00000478214 TMEM69Q5SWH9 247 aa12.25□□□□□ -0.45
HMGA1-206ENST00000478214 PDPNQ86YL7 162 aa12.25□□□□□ -0.45
HMGA1-206ENST00000478214 RNF5Q99942 180 aa12.25□□□□□ -0.45
HMGA1-206ENST00000478214 OR51J1Q9H342 316 aa12.25□□□□□ -0.45
HMGA1-206ENST00000478214 OR2W1Q9Y3N9 320 aa12.25□□□□□ -0.45
HMGA1-206ENST00000478214 IGKV1D-13A0A0B4J2D9 117 aa12.24□□□□□ -0.45
HMGA1-206ENST00000478214 FCN1O00602 326 aa12.24□□□□□ -0.45
HMGA1-206ENST00000478214 HLA-DQB1P01920 261 aa12.24□□□□□ -0.45
HMGA1-206ENST00000478214 IGF1P05019 195 aa12.24□□□□□ -0.45
HMGA1-206ENST00000478214 IGKV1-13P0DP09 117 aa12.24□□□□□ -0.45
HMGA1-206ENST00000478214 VDAC1P21796 283 aa12.24□□□□□ -0.45
HMGA1-206ENST00000478214 RORCP51449 518 aa12.24□□□□□ -0.45
HMGA1-206ENST00000478214 LUMP51884 338 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms