RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 OR14K1Q8NGZ2 314 aa9.5□□□□□ -0.89
HLA-DOB-208ENST00000475235 ORAI1Q96D31 301 aa9.5□□□□□ -0.89
HLA-DOB-208ENST00000475235 RDH12Q96NR8 316 aa9.5□□□□□ -0.89
HLA-DOB-208ENST00000475235 WDR13Q9H1Z4 485 aa9.5□□□□□ -0.89
HLA-DOB-208ENST00000475235 PLEKHA1Q9HB21 404 aa9.5□□□□□ -0.89
HLA-DOB-208ENST00000475235 POLDIP2Q9Y2S7 368 aa9.5□□□□□ -0.89
HLA-DOB-208ENST00000475235 RBM7Q9Y580 266 aaKnown RBP9.5□□□□□ -0.89
HLA-DOB-208ENST00000475235 KPTNQ9Y664 436 aa9.5□□□□□ -0.89
HLA-DOB-208ENST00000475235 TGIF2-C20orf24A0A0A6YYL0 155 aa9.49□□□□□ -0.89
HLA-DOB-208ENST00000475235 A0A1B0GTI1 187 aa9.49□□□□□ -0.89
HLA-DOB-208ENST00000475235 DNAJC9-AS1A6NH13 148 aa9.49□□□□□ -0.89
HLA-DOB-208ENST00000475235 TOMM40O96008 361 aa9.49□□□□□ -0.89
HLA-DOB-208ENST00000475235 LPLP06858 475 aa9.49□□□□□ -0.89
HLA-DOB-208ENST00000475235 UBE2V1Q13404 147 aa9.49□□□□□ -0.89
HLA-DOB-208ENST00000475235 COL5A1-AS1Q5SY13 56 aa9.49□□□□□ -0.89
HLA-DOB-208ENST00000475235 UNQ9370/PRO34162Q6UXP9 181 aa9.49□□□□□ -0.89
HLA-DOB-208ENST00000475235 ZNF788Q6ZQV5 615 aa9.49□□□□□ -0.89
HLA-DOB-208ENST00000475235 CMTM4Q8IZR5 234 aa9.49□□□□□ -0.89
HLA-DOB-208ENST00000475235 LY6G5BQ8NDX9 201 aa9.49□□□□□ -0.89
HLA-DOB-208ENST00000475235 AQP3Q92482 292 aa9.49□□□□□ -0.89
HLA-DOB-208ENST00000475235 SLC25A28Q96A46 364 aa9.49□□□□□ -0.89
HLA-DOB-208ENST00000475235 SEH1LQ96EE3 360 aa9.49□□□□□ -0.89
HLA-DOB-208ENST00000475235 AKR1E2Q96JD6 320 aa9.49□□□□□ -0.89
HLA-DOB-208ENST00000475235 OR2S2Q9NQN1 319 aa9.49□□□□□ -0.89
HLA-DOB-208ENST00000475235 ANKRD61A6NGH8 418 aa9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 F6UZH7 168 aa9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 J3QL48 77 aa9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 J3QT63 122 aa9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 FABP7O15540 132 aa9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 SYT7O43581 403 aa9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 MPZL2O60487 215 aa9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 ENTPD6O75354 484 aa9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 FCN3O75636 299 aa9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 TSPAN13O95857 204 aa9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 SFTPBP07988 381 aa9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 RNASE1P07998 156 aaKnown RBP9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 IL6RP08887 468 aaPredicted RBP9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 HKR1P10072 659 aa9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 AMY2BP19961 511 aa9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 ERVFC1-1P60608 527 aa9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 ADARB1P78563 741 aaKnown RBP9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 PLA2G7Q13093 441 aa9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 TMEM241Q24JQ0 296 aa9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 SLC22A6Q4U2R8 563 aa9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 DUX4L9Q6RFH8 374 aaPredicted RBP9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 BRD3OSQ6XYD6 125 aa9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 KIR3DL3Q8N743 410 aa9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 POC1AQ8NBT0 407 aa9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 OR10K1Q8NGX5 313 aa9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 RNASEH2CQ8TDP1 164 aaKnown RBP9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 APH1BQ8WW43 257 aa9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 C10orf35Q96D05 121 aa9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 LGALS12Q96DT0 336 aa9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 TBX15Q96SF7 602 aa9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 S100A13Q99584 98 aa9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 SULT4A1Q9BR01 284 aa9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 GINS4Q9BRT9 223 aa9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 MARVELD1Q9BSK0 173 aa9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 DCTN5Q9BTE1 182 aa9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 SSBP4Q9BWG4 385 aaPredicted RBP9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 ACTR3CQ9C0K3 210 aaPredicted RBP9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 SIRPDQ9H106 197 aa9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 NOX4Q9NPH5 578 aa9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 SLC25A10Q9UBX3 287 aaPredicted RBP9.48□□□□□ -0.89
HLA-DOB-208ENST00000475235 TRBV2A0A0J9YWF9 115 aa9.47□□□□□ -0.89
HLA-DOB-208ENST00000475235 CENPVL3A0A0U1RRI6 287 aa9.47□□□□□ -0.89
HLA-DOB-208ENST00000475235 DAPL1A0PJW8 107 aa9.47□□□□□ -0.89
HLA-DOB-208ENST00000475235 E9PQ18 207 aa9.47□□□□□ -0.89
HLA-DOB-208ENST00000475235 LCE2BO14633 110 aa9.47□□□□□ -0.89
HLA-DOB-208ENST00000475235 SSTR5P35346 364 aa9.47□□□□□ -0.89
HLA-DOB-208ENST00000475235 GABRA2P47869 451 aa9.47□□□□□ -0.89
HLA-DOB-208ENST00000475235 CAV3P56539 151 aa9.47□□□□□ -0.89
HLA-DOB-208ENST00000475235 ISL1P61371 349 aa9.47□□□□□ -0.89
HLA-DOB-208ENST00000475235 ZNF85Q03923 595 aa9.47□□□□□ -0.89
HLA-DOB-208ENST00000475235 LGALSLQ3ZCW2 172 aaPredicted RBP9.47□□□□□ -0.89
HLA-DOB-208ENST00000475235 TCTEX1D4Q5JR98 221 aa9.47□□□□□ -0.89
HLA-DOB-208ENST00000475235 SAMD13Q5VXD3 122 aa9.47□□□□□ -0.89
HLA-DOB-208ENST00000475235 C8orf46Q8TAG6 207 aa9.47□□□□□ -0.89
HLA-DOB-208ENST00000475235 RPUSD4Q96CM3 377 aaKnown RBP9.47□□□□□ -0.89
HLA-DOB-208ENST00000475235 GAFA1Q96PS6 74 aa9.47□□□□□ -0.89
HLA-DOB-208ENST00000475235 NEDD4LQ96PU5 975 aa9.47□□□□□ -0.89
HLA-DOB-208ENST00000475235 SDHCQ99643 169 aaPredicted RBP9.47□□□□□ -0.89
HLA-DOB-208ENST00000475235 ISYNA1Q9NPH2 558 aa9.47□□□□□ -0.89
HLA-DOB-208ENST00000475235 ONECUT1Q9UBC0 465 aa9.47□□□□□ -0.89
HLA-DOB-208ENST00000475235 ANK2Q01484 3957 aa9.47□□□□□ -0.89
HLA-DOB-208ENST00000475235 TRAV39A0A0B4J263 110 aa9.46□□□□□ -0.89
HLA-DOB-208ENST00000475235 IGHV1-69DA0A0B4J2H0 117 aa9.46□□□□□ -0.89
HLA-DOB-208ENST00000475235 TSPAN15O95858 294 aa9.46□□□□□ -0.89
HLA-DOB-208ENST00000475235 IGHV1-69P01742 117 aa9.46□□□□□ -0.89
HLA-DOB-208ENST00000475235 PGA5P0DJD9 388 aa9.46□□□□□ -0.89
HLA-DOB-208ENST00000475235 PSG2P11465 335 aa9.46□□□□□ -0.89
HLA-DOB-208ENST00000475235 CRHBPP24387 322 aa9.46□□□□□ -0.89
HLA-DOB-208ENST00000475235 AESQ08117 197 aa9.46□□□□□ -0.89
HLA-DOB-208ENST00000475235 FOXL1Q12952 345 aa9.46□□□□□ -0.89
HLA-DOB-208ENST00000475235 ODF4Q2M2E3 257 aa9.46□□□□□ -0.89
HLA-DOB-208ENST00000475235 DEFB112Q30KQ8 113 aa9.46□□□□□ -0.89
HLA-DOB-208ENST00000475235 TP53I3Q53FA7 332 aa9.46□□□□□ -0.89
HLA-DOB-208ENST00000475235 OCIAD2Q56VL3 154 aa9.46□□□□□ -0.89
HLA-DOB-208ENST00000475235 DMRTC1Q5HYR2 192 aa9.46□□□□□ -0.89
HLA-DOB-208ENST00000475235 SPIN3Q5JUX0 258 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms