RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 A0A1W2PPE3 182 aa16.3■□□□□ 0.2
SSR1-204ENST00000474597 K7EPK0 472 aa16.3■□□□□ 0.2
SSR1-204ENST00000474597 M0R1X1 148 aa16.3■□□□□ 0.2
SSR1-204ENST00000474597 GPR37O15354 613 aa16.3■□□□□ 0.2
SSR1-204ENST00000474597 ATG12O94817 140 aa16.3■□□□□ 0.2
SSR1-204ENST00000474597 RNF224P0DH78 156 aa16.3■□□□□ 0.2
SSR1-204ENST00000474597 EPHA1P21709 976 aa16.3■□□□□ 0.2
SSR1-204ENST00000474597 TMEM155Q4W5P6 130 aa16.3■□□□□ 0.2
SSR1-204ENST00000474597 FAM71E2Q8N5Q1 922 aa16.3■□□□□ 0.2
SSR1-204ENST00000474597 LSM10Q969L4 123 aaKnown RBP16.3■□□□□ 0.2
SSR1-204ENST00000474597 NEIL1Q96FI4 390 aaPredicted RBP16.3■□□□□ 0.2
SSR1-204ENST00000474597 CFAP46Q8IYW2 2715 aa16.3■□□□□ 0.2
SSR1-204ENST00000474597 CLEC18AA5D8T8 446 aa16.29■□□□□ 0.2
SSR1-204ENST00000474597 RAB29O14966 203 aa16.29■□□□□ 0.2
SSR1-204ENST00000474597 KCNAB3O43448 404 aa16.29■□□□□ 0.2
SSR1-204ENST00000474597 IGKV1-39P01597 117 aa16.29■□□□□ 0.2
SSR1-204ENST00000474597 IGKV1D-39P04432 117 aa16.29■□□□□ 0.2
SSR1-204ENST00000474597 NKX2-1P43699 371 aaPredicted RBP16.29■□□□□ 0.2
SSR1-204ENST00000474597 TMEM33P57088 247 aa16.29■□□□□ 0.2
SSR1-204ENST00000474597 ZNF816Q0VGE8 651 aaPredicted RBP16.29■□□□□ 0.2
SSR1-204ENST00000474597 LYG1Q8N1E2 194 aa16.29■□□□□ 0.2
SSR1-204ENST00000474597 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.29■□□□□ 0.2
SSR1-204ENST00000474597 CLEC18CQ8NCF0 446 aa16.29■□□□□ 0.2
SSR1-204ENST00000474597 ZC4H2Q9NQZ6 224 aa16.29■□□□□ 0.2
SSR1-204ENST00000474597 FAM212BQ9NTI7 297 aaPredicted RBP16.29■□□□□ 0.2
SSR1-204ENST00000474597 GAB2Q9UQC2 676 aa16.29■□□□□ 0.2
SSR1-204ENST00000474597 POMT1Q9Y6A1 747 aa16.29■□□□□ 0.2
SSR1-204ENST00000474597 A0A1B0GU03 582 aa16.29■□□□□ 0.2
SSR1-204ENST00000474597 LINC00473A8K010 186 aa16.29■□□□□ 0.2
SSR1-204ENST00000474597 C17orf98A8MV24 154 aa16.29■□□□□ 0.2
SSR1-204ENST00000474597 F12P00748 615 aaPredicted RBP16.29■□□□□ 0.2
SSR1-204ENST00000474597 IFNA7P01567 189 aa16.29■□□□□ 0.2
SSR1-204ENST00000474597 DUTP33316 252 aaKnown RBP16.29■□□□□ 0.2
SSR1-204ENST00000474597 RPL39P5Q59GN2 51 aa16.29■□□□□ 0.2
SSR1-204ENST00000474597 UTF1Q5T230 341 aa16.29■□□□□ 0.2
SSR1-204ENST00000474597 CD300LFQ8TDQ1 290 aa16.29■□□□□ 0.2
SSR1-204ENST00000474597 GPR146Q96CH1 333 aa16.29■□□□□ 0.2
SSR1-204ENST00000474597 PRELID3BQ9Y3B1 194 aa16.29■□□□□ 0.2
SSR1-204ENST00000474597 LRBAP50851 2863 aa16.28■□□□□ 0.2
SSR1-204ENST00000474597 ARID1AO14497 2285 aa16.28■□□□□ 0.2
SSR1-204ENST00000474597 E5RGE8 158 aa16.28■□□□□ 0.2
SSR1-204ENST00000474597 RAMP3O60896 148 aa16.28■□□□□ 0.2
SSR1-204ENST00000474597 SLC25A6P12236 298 aa16.28■□□□□ 0.2
SSR1-204ENST00000474597 EFNA4P52798 201 aa16.28■□□□□ 0.2
SSR1-204ENST00000474597 TLE4Q04727 773 aa16.28■□□□□ 0.2
SSR1-204ENST00000474597 ZNF841Q6ZN19 808 aa16.28■□□□□ 0.2
SSR1-204ENST00000474597 ZNF439Q8NDP4 499 aa16.28■□□□□ 0.2
SSR1-204ENST00000474597 ZNF680Q8NEM1 530 aa16.28■□□□□ 0.2
SSR1-204ENST00000474597 SPOCK3Q9BQ16 436 aa16.28■□□□□ 0.2
SSR1-204ENST00000474597 NSG2Q9Y328 171 aa16.28■□□□□ 0.2
SSR1-204ENST00000474597 A0A1W2PPH5 198 aa16.27■□□□□ 0.2
SSR1-204ENST00000474597 BCL2L11O43521 198 aa16.27■□□□□ 0.2
SSR1-204ENST00000474597 ERVFRD-1P60508 538 aa16.27■□□□□ 0.2
SSR1-204ENST00000474597 SLC25A48Q6ZT89 311 aaKnown RBP16.27■□□□□ 0.2
SSR1-204ENST00000474597 SLC51BQ86UW2 128 aa16.27■□□□□ 0.2
SSR1-204ENST00000474597 AQP10Q96PS8 301 aa16.27■□□□□ 0.2
SSR1-204ENST00000474597 ARPC5LQ9BPX5 153 aa16.27■□□□□ 0.2
SSR1-204ENST00000474597 RCL1Q9Y2P8 373 aaKnown RBP16.27■□□□□ 0.2
SSR1-204ENST00000474597 HRNRQ86YZ3 2850 aaPredicted RBP16.27■□□□□ 0.19
SSR1-204ENST00000474597 USF3Q68DE3 2245 aa16.27■□□□□ 0.19
SSR1-204ENST00000474597 SAA2-SAA4A0A096LPE2 208 aa16.26■□□□□ 0.19
SSR1-204ENST00000474597 A0A0G2JRQ6 117 aa16.26■□□□□ 0.19
SSR1-204ENST00000474597 IGKV1-5P01602 117 aa16.26■□□□□ 0.19
SSR1-204ENST00000474597 SAA2P0DJI9 122 aaPredicted RBP16.26■□□□□ 0.19
SSR1-204ENST00000474597 PVALBP20472 110 aaPredicted RBP16.26■□□□□ 0.19
SSR1-204ENST00000474597 GPR6P46095 362 aaPredicted RBP16.26■□□□□ 0.19
SSR1-204ENST00000474597 WRBO00258 174 aa16.26■□□□□ 0.19
SSR1-204ENST00000474597 PROP1O75360 226 aa16.26■□□□□ 0.19
SSR1-204ENST00000474597 S1PR2O95136 353 aa16.26■□□□□ 0.19
SSR1-204ENST00000474597 LINC00205P59089 165 aa16.26■□□□□ 0.19
SSR1-204ENST00000474597 NCR3LG1Q68D85 454 aa16.26■□□□□ 0.19
SSR1-204ENST00000474597 S1PR3Q99500 378 aa16.26■□□□□ 0.19
SSR1-204ENST00000474597 PLEKHA2Q9HB19 425 aa16.26■□□□□ 0.19
SSR1-204ENST00000474597 CACNG5Q9UF02 275 aa16.26■□□□□ 0.19
SSR1-204ENST00000474597 UBQLN2Q9UHD9 624 aa16.26■□□□□ 0.19
SSR1-204ENST00000474597 MSGN1A6NI15 193 aa16.25■□□□□ 0.19
SSR1-204ENST00000474597 FCGR3BO75015 233 aa16.25■□□□□ 0.19
SSR1-204ENST00000474597 NDUFS7O75251 213 aa16.25■□□□□ 0.19
SSR1-204ENST00000474597 KRASP01116 189 aa16.25■□□□□ 0.19
SSR1-204ENST00000474597 RPL12P30050 165 aaKnown RBP16.25■□□□□ 0.19
SSR1-204ENST00000474597 KIR2DS2P43631 304 aa16.25■□□□□ 0.19
SSR1-204ENST00000474597 GNB2P62879 340 aa16.25■□□□□ 0.19
SSR1-204ENST00000474597 EXOSC2Q13868 293 aaKnown RBP16.25■□□□□ 0.19
SSR1-204ENST00000474597 NDUFA5Q16718 116 aa16.25■□□□□ 0.19
SSR1-204ENST00000474597 WDR25Q64LD2 544 aaPredicted RBP16.25■□□□□ 0.19
SSR1-204ENST00000474597 ZNF471Q9BX82 626 aaPredicted RBP16.25■□□□□ 0.19
SSR1-204ENST00000474597 NARFLQ9H6Q4 476 aa16.25■□□□□ 0.19
SSR1-204ENST00000474597 MMP24Q9Y5R2 645 aa16.25■□□□□ 0.19
SSR1-204ENST00000474597 F5H0A9 414 aaPredicted RBP16.24■□□□□ 0.19
SSR1-204ENST00000474597 NXPH3O95157 252 aa16.24■□□□□ 0.19
SSR1-204ENST00000474597 G6PCP35575 357 aa16.24■□□□□ 0.19
SSR1-204ENST00000474597 POLR2GP62487 172 aaKnown RBP eCLIP16.24■□□□□ 0.19
SSR1-204ENST00000474597 UBA52P62987 128 aaKnown RBP16.24■□□□□ 0.19
SSR1-204ENST00000474597 VAMP2P63027 116 aa16.24■□□□□ 0.19
SSR1-204ENST00000474597 IZUMO4Q1ZYL8 232 aa16.24■□□□□ 0.19
SSR1-204ENST00000474597 CXorf66Q5JRM2 361 aaPredicted RBP16.24■□□□□ 0.19
SSR1-204ENST00000474597 ADTRPQ96IZ2 230 aa16.24■□□□□ 0.19
SSR1-204ENST00000474597 PATZ1Q9HBE1 687 aaKnown RBP16.24■□□□□ 0.19
SSR1-204ENST00000474597 PPIAL4CA0A0B4J2A2 164 aa16.24■□□□□ 0.19
SSR1-204ENST00000474597 SPDEFO95238 335 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms