RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 SLC25A16P16260 332 aa16.66■□□□□ 0.26
CDHR3-210ENST00000474330 GPR12P47775 334 aa16.66■□□□□ 0.26
CDHR3-210ENST00000474330 GNG10P50151 68 aa16.66■□□□□ 0.26
CDHR3-210ENST00000474330 MSI2Q96DH6 328 aaKnown RBP16.66■□□□□ 0.26
CDHR3-210ENST00000474330 TMEM133Q9H2Q1 129 aa16.66■□□□□ 0.26
CDHR3-210ENST00000474330 RANGRFQ9HD47 186 aaPredicted RBP16.66■□□□□ 0.26
CDHR3-210ENST00000474330 IGHV4-61A0A0C4DH41 118 aa16.65■□□□□ 0.26
CDHR3-210ENST00000474330 A0A1W2PPE3 182 aa16.65■□□□□ 0.26
CDHR3-210ENST00000474330 H0Y980 276 aa16.65■□□□□ 0.26
CDHR3-210ENST00000474330 M0R1W7 72 aa16.65■□□□□ 0.26
CDHR3-210ENST00000474330 FOXH1O75593 365 aa16.65■□□□□ 0.26
CDHR3-210ENST00000474330 PAX2Q02962 417 aa16.65■□□□□ 0.26
CDHR3-210ENST00000474330 LIAT1Q6ZQX7 453 aa16.65■□□□□ 0.26
CDHR3-210ENST00000474330 LINC00311Q8N616 119 aa16.65■□□□□ 0.26
CDHR3-210ENST00000474330 LRTM2Q8N967 370 aa16.65■□□□□ 0.26
CDHR3-210ENST00000474330 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.65■□□□□ 0.26
CDHR3-210ENST00000474330 ZNF596Q8TC21 504 aa16.65■□□□□ 0.26
CDHR3-210ENST00000474330 TMEM222Q9H0R3 208 aa16.65■□□□□ 0.26
CDHR3-210ENST00000474330 PIPOXQ9P0Z9 390 aa16.65■□□□□ 0.26
CDHR3-210ENST00000474330 RNF212BA8MTL3 300 aa16.64■□□□□ 0.25
CDHR3-210ENST00000474330 GOSR2O14653 212 aa16.64■□□□□ 0.25
CDHR3-210ENST00000474330 RAB29O14966 203 aa16.64■□□□□ 0.25
CDHR3-210ENST00000474330 ENSAO43768 121 aaKnown RBP16.64■□□□□ 0.25
CDHR3-210ENST00000474330 PROP1O75360 226 aa16.64■□□□□ 0.25
CDHR3-210ENST00000474330 UCP1P25874 307 aa16.64■□□□□ 0.25
CDHR3-210ENST00000474330 ZNF66Q6ZN08 573 aa16.64■□□□□ 0.25
CDHR3-210ENST00000474330 ODF3L1Q8IXM7 274 aa16.64■□□□□ 0.25
CDHR3-210ENST00000474330 CIARTQ8N365 385 aaPredicted RBP16.64■□□□□ 0.25
CDHR3-210ENST00000474330 Q96MF0 132 aa16.64■□□□□ 0.25
CDHR3-210ENST00000474330 FYTTD1Q96QD9 318 aaKnown RBP16.64■□□□□ 0.25
CDHR3-210ENST00000474330 ZNF436Q9C0F3 470 aaPredicted RBP16.64■□□□□ 0.25
CDHR3-210ENST00000474330 ONECUT1Q9UBC0 465 aa16.64■□□□□ 0.25
CDHR3-210ENST00000474330 POLR3KQ9Y2Y1 108 aaPredicted RBP16.64■□□□□ 0.25
CDHR3-210ENST00000474330 LCN2P80188 198 aa16.63■□□□□ 0.25
CDHR3-210ENST00000474330 C1orf122Q6ZSJ8 110 aa16.63■□□□□ 0.25
CDHR3-210ENST00000474330 TCTE3Q8IZS6 198 aa16.63■□□□□ 0.25
CDHR3-210ENST00000474330 LGI3Q8N145 548 aa16.63■□□□□ 0.25
CDHR3-210ENST00000474330 KIR3DL3Q8N743 410 aa16.63■□□□□ 0.25
CDHR3-210ENST00000474330 OR5M8Q8NGP6 311 aa16.63■□□□□ 0.25
CDHR3-210ENST00000474330 OR51H1Q8NH63 302 aa16.63■□□□□ 0.25
CDHR3-210ENST00000474330 OR9G1Q8NH87 305 aa16.63■□□□□ 0.25
CDHR3-210ENST00000474330 HSD17B10Q99714 261 aaKnown RBP16.63■□□□□ 0.25
CDHR3-210ENST00000474330 RAB18Q9NP72 206 aa16.63■□□□□ 0.25
CDHR3-210ENST00000474330 J3QR06 171 aa16.63■□□□□ 0.25
CDHR3-210ENST00000474330 OR2A4O95047 310 aa16.63■□□□□ 0.25
CDHR3-210ENST00000474330 FOSL1P15407 271 aa16.63■□□□□ 0.25
CDHR3-210ENST00000474330 H2BFSP57053 126 aa16.63■□□□□ 0.25
CDHR3-210ENST00000474330 ARF6P62330 175 aa16.63■□□□□ 0.25
CDHR3-210ENST00000474330 SRPXP78539 464 aa16.63■□□□□ 0.25
CDHR3-210ENST00000474330 CATR1Q13166 79 aa16.63■□□□□ 0.25
CDHR3-210ENST00000474330 LYG1Q8N1E2 194 aa16.63■□□□□ 0.25
CDHR3-210ENST00000474330 ABHD12Q8N2K0 398 aa16.63■□□□□ 0.25
CDHR3-210ENST00000474330 Q8N7P7 452 aa16.63■□□□□ 0.25
CDHR3-210ENST00000474330 TMEM56Q96MV1 263 aa16.63■□□□□ 0.25
CDHR3-210ENST00000474330 OR2A7Q96R45 310 aa16.63■□□□□ 0.25
CDHR3-210ENST00000474330 GSX1Q9H4S2 264 aaPredicted RBP16.63■□□□□ 0.25
CDHR3-210ENST00000474330 LIN7CQ9NUP9 197 aaKnown RBP16.63■□□□□ 0.25
CDHR3-210ENST00000474330 TMEM56-RWDD3S4R434 201 aa16.63■□□□□ 0.25
CDHR3-210ENST00000474330 CDS2O95674 445 aa16.62■□□□□ 0.25
CDHR3-210ENST00000474330 BTNL3Q6UXE8 466 aa16.62■□□□□ 0.25
CDHR3-210ENST00000474330 TNFRSF14Q92956 283 aa16.62■□□□□ 0.25
CDHR3-210ENST00000474330 SMR3AQ99954 134 aa16.62■□□□□ 0.25
CDHR3-210ENST00000474330 ZNF251Q9BRH9 671 aa16.62■□□□□ 0.25
CDHR3-210ENST00000474330 ABCA2Q9BZC7 2435 aa16.62■□□□□ 0.25
CDHR3-210ENST00000474330 SAA2-SAA4A0A096LPE2 208 aa16.61■□□□□ 0.25
CDHR3-210ENST00000474330 IGHV2-70DA0A0C4DH43 119 aa16.61■□□□□ 0.25
CDHR3-210ENST00000474330 FAM157AC9JC47 383 aa16.61■□□□□ 0.25
CDHR3-210ENST00000474330 SIX6O95475 246 aa16.61■□□□□ 0.25
CDHR3-210ENST00000474330 GIPP09681 153 aaPredicted RBP16.61■□□□□ 0.25
CDHR3-210ENST00000474330 SAA2P0DJI9 122 aaPredicted RBP16.61■□□□□ 0.25
CDHR3-210ENST00000474330 RPL30P62888 115 aaKnown RBP16.61■□□□□ 0.25
CDHR3-210ENST00000474330 RPL39P5Q59GN2 51 aa16.61■□□□□ 0.25
CDHR3-210ENST00000474330 DCAF12L2Q5VW00 463 aa16.61■□□□□ 0.25
CDHR3-210ENST00000474330 TCTEX1D1Q8N7M0 179 aa16.61■□□□□ 0.25
CDHR3-210ENST00000474330 LHFPL5Q8TAF8 219 aa16.61■□□□□ 0.25
CDHR3-210ENST00000474330 C18orf12Q96KH6 178 aa16.61■□□□□ 0.25
CDHR3-210ENST00000474330 METTL8Q9H825 291 aaKnown RBP16.61■□□□□ 0.25
CDHR3-210ENST00000474330 KPTNQ9Y664 436 aa16.61■□□□□ 0.25
CDHR3-210ENST00000474330 IGHV2-26A0A0B4J1V2 119 aa16.6■□□□□ 0.25
CDHR3-210ENST00000474330 CCSO14618 274 aa16.6■□□□□ 0.25
CDHR3-210ENST00000474330 ADAP1O75689 374 aa16.6■□□□□ 0.25
CDHR3-210ENST00000474330 HNRNPCP07910 306 aaKnown RBP eCLIP16.6■□□□□ 0.25
CDHR3-210ENST00000474330 ZNF16P17020 682 aaPredicted RBP16.6■□□□□ 0.25
CDHR3-210ENST00000474330 USF1P22415 310 aaPredicted RBP16.6■□□□□ 0.25
CDHR3-210ENST00000474330 DUTP33316 252 aaKnown RBP16.6■□□□□ 0.25
CDHR3-210ENST00000474330 C1orf229Q6ZS94 237 aaPredicted RBP16.6■□□□□ 0.25
CDHR3-210ENST00000474330 ASB13Q8WXK3 278 aa16.6■□□□□ 0.25
CDHR3-210ENST00000474330 IL22RA2Q969J5 263 aa16.6■□□□□ 0.25
CDHR3-210ENST00000474330 CLEC7AQ9BXN2 247 aa16.6■□□□□ 0.25
CDHR3-210ENST00000474330 MMP26Q9NRE1 261 aa16.6■□□□□ 0.25
CDHR3-210ENST00000474330 FAM212BQ9NTI7 297 aaPredicted RBP16.6■□□□□ 0.25
CDHR3-210ENST00000474330 ZNRD1Q9P1U0 126 aa16.6■□□□□ 0.25
CDHR3-210ENST00000474330 PIGBOS1A0A0B4J2F0 54 aa16.59■□□□□ 0.25
CDHR3-210ENST00000474330 LINC00473A8K010 186 aa16.59■□□□□ 0.25
CDHR3-210ENST00000474330 M0R1X1 148 aa16.59■□□□□ 0.25
CDHR3-210ENST00000474330 HOXB5P09067 269 aa16.59■□□□□ 0.25
CDHR3-210ENST00000474330 PRTN3P24158 256 aa16.59■□□□□ 0.25
CDHR3-210ENST00000474330 SRSF4Q08170 494 aaKnown RBP16.59■□□□□ 0.25
CDHR3-210ENST00000474330 ZNF695Q8IW36 515 aa16.59■□□□□ 0.25
CDHR3-210ENST00000474330 SELENOHQ8IZQ5 122 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms