RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 TP53RKQ96S44 253 aa12.37□□□□□ -0.43
COL4A5-203ENST00000470339 S1PR3Q99500 378 aa12.37□□□□□ -0.43
COL4A5-203ENST00000470339 ZNF436Q9C0F3 470 aaPredicted RBP12.37□□□□□ -0.43
COL4A5-203ENST00000470339 POLQO75417 2590 aa12.36□□□□□ -0.43
COL4A5-203ENST00000470339 DUXBA0A1W2PPF3 345 aa12.36□□□□□ -0.43
COL4A5-203ENST00000470339 TOR1AO14656 332 aa12.36□□□□□ -0.43
COL4A5-203ENST00000470339 TNFSF12O43508 249 aa12.36□□□□□ -0.43
COL4A5-203ENST00000470339 PROP1O75360 226 aa12.36□□□□□ -0.43
COL4A5-203ENST00000470339 CDS2O95674 445 aa12.36□□□□□ -0.43
COL4A5-203ENST00000470339 IGHV3-7P01780 117 aa12.36□□□□□ -0.43
COL4A5-203ENST00000470339 RPA2P15927 270 aa12.36□□□□□ -0.43
COL4A5-203ENST00000470339 GNG10P50151 68 aa12.36□□□□□ -0.43
COL4A5-203ENST00000470339 ZNF137PP52743 207 aa12.36□□□□□ -0.43
COL4A5-203ENST00000470339 ARF6P62330 175 aa12.36□□□□□ -0.43
COL4A5-203ENST00000470339 LCN2P80188 198 aa12.36□□□□□ -0.43
COL4A5-203ENST00000470339 SRSF4Q08170 494 aaKnown RBP12.36□□□□□ -0.43
COL4A5-203ENST00000470339 SP6Q3SY56 376 aa12.36□□□□□ -0.43
COL4A5-203ENST00000470339 TCTE3Q8IZS6 198 aa12.36□□□□□ -0.43
COL4A5-203ENST00000470339 LYG1Q8N1E2 194 aa12.36□□□□□ -0.43
COL4A5-203ENST00000470339 BEND2Q8NDZ0 799 aa12.36□□□□□ -0.43
COL4A5-203ENST00000470339 OR5M8Q8NGP6 311 aa12.36□□□□□ -0.43
COL4A5-203ENST00000470339 OR13D1Q8NGV5 346 aa12.36□□□□□ -0.43
COL4A5-203ENST00000470339 CD300LFQ8TDQ1 290 aa12.36□□□□□ -0.43
COL4A5-203ENST00000470339 C5orf30Q96GV9 206 aa12.36□□□□□ -0.43
COL4A5-203ENST00000470339 ADTRPQ96IZ2 230 aa12.36□□□□□ -0.43
COL4A5-203ENST00000470339 ZNF251Q9BRH9 671 aa12.36□□□□□ -0.43
COL4A5-203ENST00000470339 CLEC7AQ9BXN2 247 aa12.36□□□□□ -0.43
COL4A5-203ENST00000470339 HEXA-AS1Q9H8Q6 139 aa12.36□□□□□ -0.43
COL4A5-203ENST00000470339 NAV2Q8IVL1 2488 aa12.36□□□□□ -0.43
COL4A5-203ENST00000470339 NBPF19A0A087WUL8 3843 aa12.36□□□□□ -0.43
COL4A5-203ENST00000470339 WNK2Q9Y3S1 2297 aa12.35□□□□□ -0.43
COL4A5-203ENST00000470339 SAA2-SAA4A0A096LPE2 208 aa12.35□□□□□ -0.43
COL4A5-203ENST00000470339 IGHV2-26A0A0B4J1V2 119 aa12.35□□□□□ -0.43
COL4A5-203ENST00000470339 FAM157AC9JC47 383 aa12.35□□□□□ -0.43
COL4A5-203ENST00000470339 GOSR2O14653 212 aa12.35□□□□□ -0.43
COL4A5-203ENST00000470339 IGLV1-47P01700 117 aa12.35□□□□□ -0.43
COL4A5-203ENST00000470339 SERPINE2P07093 398 aa12.35□□□□□ -0.43
COL4A5-203ENST00000470339 GIPP09681 153 aaPredicted RBP12.35□□□□□ -0.43
COL4A5-203ENST00000470339 SAA2P0DJI9 122 aaPredicted RBP12.35□□□□□ -0.43
COL4A5-203ENST00000470339 IL3RAP26951 378 aa12.35□□□□□ -0.43
COL4A5-203ENST00000470339 DUTP33316 252 aaKnown RBP12.35□□□□□ -0.43
COL4A5-203ENST00000470339 RAP2BP61225 183 aa12.35□□□□□ -0.43
COL4A5-203ENST00000470339 CD83Q01151 205 aa12.35□□□□□ -0.43
COL4A5-203ENST00000470339 C2orf68Q2NKX9 166 aa12.35□□□□□ -0.43
COL4A5-203ENST00000470339 BTNL3Q6UXE8 466 aa12.35□□□□□ -0.43
COL4A5-203ENST00000470339 ZNF833PQ6ZTB9 187 aa12.35□□□□□ -0.43
COL4A5-203ENST00000470339 OR11H6Q8NGC7 330 aa12.35□□□□□ -0.43
COL4A5-203ENST00000470339 OR51H1Q8NH63 302 aa12.35□□□□□ -0.43
COL4A5-203ENST00000470339 TMEM186Q96B77 213 aa12.35□□□□□ -0.43
COL4A5-203ENST00000470339 C18orf12Q96KH6 178 aa12.35□□□□□ -0.43
COL4A5-203ENST00000470339 GPHA2Q96T91 129 aa12.35□□□□□ -0.43
COL4A5-203ENST00000470339 RANGRFQ9HD47 186 aaPredicted RBP12.35□□□□□ -0.43
COL4A5-203ENST00000470339 A0A096LNT2 108 aa12.34□□□□□ -0.43
COL4A5-203ENST00000470339 A0A1W2PPE3 182 aa12.34□□□□□ -0.43
COL4A5-203ENST00000470339 M0R1X1 148 aa12.34□□□□□ -0.43
COL4A5-203ENST00000470339 RBFOX2O43251 390 aaKnown RBP eCLIP12.34□□□□□ -0.43
COL4A5-203ENST00000470339 IFNA21P01568 189 aa12.34□□□□□ -0.43
COL4A5-203ENST00000470339 KIR2DS2P43631 304 aa12.34□□□□□ -0.43
COL4A5-203ENST00000470339 THBS3P49746 956 aa12.34□□□□□ -0.43
COL4A5-203ENST00000470339 DVL1P1P54792 670 aaPredicted RBP12.34□□□□□ -0.43
COL4A5-203ENST00000470339 RPL30P62888 115 aaKnown RBP12.34□□□□□ -0.43
COL4A5-203ENST00000470339 TAGLNQ01995 201 aaKnown RBP12.34□□□□□ -0.43
COL4A5-203ENST00000470339 LOXL1Q08397 574 aaPredicted RBP12.34□□□□□ -0.43
COL4A5-203ENST00000470339 ZNF695Q8IW36 515 aa12.34□□□□□ -0.43
COL4A5-203ENST00000470339 OR10X1Q8NGY0 326 aa12.34□□□□□ -0.43
COL4A5-203ENST00000470339 ST6GALNAC6Q969X2 333 aa12.34□□□□□ -0.43
COL4A5-203ENST00000470339 SIRPDQ9H106 197 aa12.34□□□□□ -0.43
COL4A5-203ENST00000470339 PRELID3BQ9Y3B1 194 aa12.34□□□□□ -0.43
COL4A5-203ENST00000470339 TMED3Q9Y3Q3 217 aa12.34□□□□□ -0.43
COL4A5-203ENST00000470339 AMMECR1Q9Y4X0 333 aaPredicted RBP12.34□□□□□ -0.43
COL4A5-203ENST00000470339 MAP1AP78559 2803 aaPredicted RBP12.34□□□□□ -0.43
COL4A5-203ENST00000470339 MED13LQ71F56 2210 aa12.34□□□□□ -0.43
COL4A5-203ENST00000470339 ABCA2Q9BZC7 2435 aa12.33□□□□□ -0.43
COL4A5-203ENST00000470339 H2BFSP57053 126 aa12.33□□□□□ -0.44
COL4A5-203ENST00000470339 CYCSP99999 105 aaKnown RBP12.33□□□□□ -0.44
COL4A5-203ENST00000470339 ZNF585BQ52M93 769 aa12.33□□□□□ -0.44
COL4A5-203ENST00000470339 RPL39P5Q59GN2 51 aa12.33□□□□□ -0.44
COL4A5-203ENST00000470339 Q5PR19 223 aa12.33□□□□□ -0.44
COL4A5-203ENST00000470339 TMEM268Q5VZI3 342 aa12.33□□□□□ -0.44
COL4A5-203ENST00000470339 NCR3LG1Q68D85 454 aa12.33□□□□□ -0.44
COL4A5-203ENST00000470339 GSG1LQ6UXU4 331 aa12.33□□□□□ -0.44
COL4A5-203ENST00000470339 SELENOHQ8IZQ5 122 aaKnown RBP12.33□□□□□ -0.44
COL4A5-203ENST00000470339 TCTEX1D2Q8WW35 142 aa12.33□□□□□ -0.44
COL4A5-203ENST00000470339 RBPMSQ93062 196 aaKnown RBP12.33□□□□□ -0.44
COL4A5-203ENST00000470339 MMP26Q9NRE1 261 aa12.33□□□□□ -0.44
COL4A5-203ENST00000470339 PRR13Q9NZ81 148 aa12.33□□□□□ -0.44
COL4A5-203ENST00000470339 INSIG2Q9Y5U4 225 aa12.33□□□□□ -0.44
COL4A5-203ENST00000470339 UNC79Q9P2D8 2635 aa12.33□□□□□ -0.44
COL4A5-203ENST00000470339 LINC00473A8K010 186 aa12.32□□□□□ -0.44
COL4A5-203ENST00000470339 A8MV72 311 aaPredicted RBP12.32□□□□□ -0.44
COL4A5-203ENST00000470339 B4DSR2 109 aa12.32□□□□□ -0.44
COL4A5-203ENST00000470339 ATG12O94817 140 aa12.32□□□□□ -0.44
COL4A5-203ENST00000470339 MMP9P14780 707 aa12.32□□□□□ -0.44
COL4A5-203ENST00000470339 ZNF16P17020 682 aaPredicted RBP12.32□□□□□ -0.44
COL4A5-203ENST00000470339 VDAC1P21796 283 aa12.32□□□□□ -0.44
COL4A5-203ENST00000470339 GATA3P23771 443 aa12.32□□□□□ -0.44
COL4A5-203ENST00000470339 PAX8Q06710 450 aa12.32□□□□□ -0.44
COL4A5-203ENST00000470339 HLA-DRB5Q30154 266 aa12.32□□□□□ -0.44
COL4A5-203ENST00000470339 C1orf229Q6ZS94 237 aaPredicted RBP12.32□□□□□ -0.44
COL4A5-203ENST00000470339 LHFPL5Q8TAF8 219 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms