RNA–Protein interactions for RNA: ENST00000465339.5

COL28A1-206, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 3

Gene COL28A1, Length 722 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-206ENST00000465339 CTXN2P0C2S0 81 aa10.32□□□□□ -0.76
COL28A1-206ENST00000465339 CT45A6P0DMU7 189 aa10.32□□□□□ -0.76
COL28A1-206ENST00000465339 CT45A5P0DMU8 189 aa10.32□□□□□ -0.76
COL28A1-206ENST00000465339 CT45A7P0DMV0 189 aa10.32□□□□□ -0.76
COL28A1-206ENST00000465339 F2RL1P55085 397 aa10.32□□□□□ -0.76
COL28A1-206ENST00000465339 GNG2P59768 71 aa10.32□□□□□ -0.76
COL28A1-206ENST00000465339 ACTBP60709 375 aa10.32□□□□□ -0.76
COL28A1-206ENST00000465339 CD83Q01151 205 aa10.32□□□□□ -0.76
COL28A1-206ENST00000465339 RPL39P5Q59GN2 51 aa10.32□□□□□ -0.76
COL28A1-206ENST00000465339 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.32□□□□□ -0.76
COL28A1-206ENST00000465339 SLC25A38Q96DW6 304 aa10.32□□□□□ -0.76
COL28A1-206ENST00000465339 S100A16Q96FQ6 103 aaKnown RBP10.32□□□□□ -0.76
COL28A1-206ENST00000465339 CITED2Q99967 270 aaPredicted RBP10.32□□□□□ -0.76
COL28A1-206ENST00000465339 ST6GALNAC5Q9BVH7 336 aa10.32□□□□□ -0.76
COL28A1-206ENST00000465339 ELF5Q9UKW6 265 aaPredicted RBP10.32□□□□□ -0.76
COL28A1-206ENST00000465339 RNF150Q9ULK6 438 aa10.32□□□□□ -0.76
COL28A1-206ENST00000465339 GAB2Q9UQC2 676 aa10.32□□□□□ -0.76
COL28A1-206ENST00000465339 TRAV18A0A075B6X5 111 aa10.31□□□□□ -0.76
COL28A1-206ENST00000465339 PSMB11A5LHX3 300 aa10.31□□□□□ -0.76
COL28A1-206ENST00000465339 TMEM235A6NFC5 223 aa10.31□□□□□ -0.76
COL28A1-206ENST00000465339 KCNAB3O43448 404 aa10.31□□□□□ -0.76
COL28A1-206ENST00000465339 TSPAN15O95858 294 aa10.31□□□□□ -0.76
COL28A1-206ENST00000465339 OPN1MWP04001 364 aa10.31□□□□□ -0.76
COL28A1-206ENST00000465339 OPN1MW2P0DN77 364 aa10.31□□□□□ -0.76
COL28A1-206ENST00000465339 OPN1MW3P0DN78 364 aa10.31□□□□□ -0.76
COL28A1-206ENST00000465339 TGFBR1P36897 503 aa10.31□□□□□ -0.76
COL28A1-206ENST00000465339 GPR12P47775 334 aa10.31□□□□□ -0.76
COL28A1-206ENST00000465339 FAM71E2Q8N5Q1 922 aa10.31□□□□□ -0.76
COL28A1-206ENST00000465339 NPBQ8NG41 125 aa10.31□□□□□ -0.76
COL28A1-206ENST00000465339 OR4X2Q8NGF9 303 aa10.31□□□□□ -0.76
COL28A1-206ENST00000465339 OR5AN1Q8NGI8 311 aa10.31□□□□□ -0.76
COL28A1-206ENST00000465339 MAFIPQ8WZ33 124 aa10.31□□□□□ -0.76
COL28A1-206ENST00000465339 SLC25A46Q96AG3 418 aa10.31□□□□□ -0.76
COL28A1-206ENST00000465339 RNF5Q99942 180 aa10.31□□□□□ -0.76
COL28A1-206ENST00000465339 GINS4Q9BRT9 223 aa10.31□□□□□ -0.76
COL28A1-206ENST00000465339 GON7Q9BXV9 100 aa10.31□□□□□ -0.76
COL28A1-206ENST00000465339 AP4M1O00189 453 aa10.3□□□□□ -0.76
COL28A1-206ENST00000465339 SSX5O60225 188 aa10.3□□□□□ -0.76
COL28A1-206ENST00000465339 PROP1O75360 226 aa10.3□□□□□ -0.76
COL28A1-206ENST00000465339 RBBP9O75884 186 aa10.3□□□□□ -0.76
COL28A1-206ENST00000465339 OR8U9P0C7N5 309 aa10.3□□□□□ -0.76
COL28A1-206ENST00000465339 SMIM18P0DKX4 95 aa10.3□□□□□ -0.76
COL28A1-206ENST00000465339 SOX6P35712 828 aa10.3□□□□□ -0.76
COL28A1-206ENST00000465339 SLC35B1P78383 322 aa10.3□□□□□ -0.76
COL28A1-206ENST00000465339 MMDQ15546 238 aa10.3□□□□□ -0.76
COL28A1-206ENST00000465339 NSUN5P1Q3KNT7 163 aa10.3□□□□□ -0.76
COL28A1-206ENST00000465339 CNIH2Q6PI25 160 aa10.3□□□□□ -0.76
COL28A1-206ENST00000465339 FAM131AQ6UXB0 335 aa10.3□□□□□ -0.76
COL28A1-206ENST00000465339 H1FOOQ8IZA3 346 aaPredicted RBP10.3□□□□□ -0.76
COL28A1-206ENST00000465339 COMMD1Q8N668 190 aa10.3□□□□□ -0.76
COL28A1-206ENST00000465339 OR8U1Q8NH10 309 aa10.3□□□□□ -0.76
COL28A1-206ENST00000465339 FAM110DQ8TAY7 271 aaPredicted RBP10.3□□□□□ -0.76
COL28A1-206ENST00000465339 NUDCD2Q8WVJ2 157 aa10.3□□□□□ -0.76
COL28A1-206ENST00000465339 MRPS26Q9BYN8 205 aaKnown RBP10.3□□□□□ -0.76
COL28A1-206ENST00000465339 WASHC3Q9Y3C0 194 aa10.3□□□□□ -0.76
COL28A1-206ENST00000465339 TSSC4Q9Y5U2 329 aaPredicted RBP10.3□□□□□ -0.76
COL28A1-206ENST00000465339 TRRAPQ9Y4A5 3859 aa10.3□□□□□ -0.76
COL28A1-206ENST00000465339 IGKV1D-8A0A087WSZ0 117 aa10.29□□□□□ -0.76
COL28A1-206ENST00000465339 TCRBV4S1A1TA0A5B7 111 aa10.29□□□□□ -0.76
COL28A1-206ENST00000465339 LINC01548A6NM66 108 aa10.29□□□□□ -0.76
COL28A1-206ENST00000465339 ADARB2-AS1A8MUL3 147 aa10.29□□□□□ -0.76
COL28A1-206ENST00000465339 H0YJW9 148 aa10.29□□□□□ -0.76
COL28A1-206ENST00000465339 H7C2Y5 167 aa10.29□□□□□ -0.76
COL28A1-206ENST00000465339 NBR2O15453 112 aa10.29□□□□□ -0.76
COL28A1-206ENST00000465339 XRCC3O43542 346 aa10.29□□□□□ -0.76
COL28A1-206ENST00000465339 TFAP2AP05549 437 aa10.29□□□□□ -0.76
COL28A1-206ENST00000465339 VBP1P61758 197 aa10.29□□□□□ -0.76
COL28A1-206ENST00000465339 NCS1P62166 190 aa10.29□□□□□ -0.76
COL28A1-206ENST00000465339 TCTEX1D4Q5JR98 221 aa10.29□□□□□ -0.76
COL28A1-206ENST00000465339 UBE2NLQ5JXB2 153 aa10.29□□□□□ -0.76
COL28A1-206ENST00000465339 HIST2H2BDQ6DRA6 164 aa10.29□□□□□ -0.76
COL28A1-206ENST00000465339 LIN54Q6MZP7 749 aa10.29□□□□□ -0.76
COL28A1-206ENST00000465339 GLDNQ6ZMI3 551 aaPredicted RBP10.29□□□□□ -0.76
COL28A1-206ENST00000465339 ANKRD13BQ86YJ7 626 aa10.29□□□□□ -0.76
COL28A1-206ENST00000465339 STPG2Q8N412 459 aa10.29□□□□□ -0.76
COL28A1-206ENST00000465339 OR4F17Q8NGA8 305 aa10.29□□□□□ -0.76
COL28A1-206ENST00000465339 RITA1Q96K30 269 aa10.29□□□□□ -0.76
COL28A1-206ENST00000465339 NOL4LQ96MY1 436 aaPredicted RBP10.29□□□□□ -0.76
COL28A1-206ENST00000465339 OR4F4Q96R69 305 aa10.29□□□□□ -0.76
COL28A1-206ENST00000465339 AUNIPQ9H7T9 357 aa10.29□□□□□ -0.76
COL28A1-206ENST00000465339 KIAA1456Q9P272 454 aa10.29□□□□□ -0.76
COL28A1-206ENST00000465339 ANXA10Q9UJ72 324 aa10.29□□□□□ -0.76
COL28A1-206ENST00000465339 RBM7Q9Y580 266 aaKnown RBP10.29□□□□□ -0.76
COL28A1-206ENST00000465339 NDUFA3O95167 84 aa10.28□□□□□ -0.76
COL28A1-206ENST00000465339 CBX5P45973 191 aa10.28□□□□□ -0.76
COL28A1-206ENST00000465339 C5orf64Q2M2E5 130 aa10.28□□□□□ -0.76
COL28A1-206ENST00000465339 SAMD12Q8N8I0 201 aa10.28□□□□□ -0.76
COL28A1-206ENST00000465339 DRAXINQ8NBI3 349 aaPredicted RBP10.28□□□□□ -0.76
COL28A1-206ENST00000465339 ACOT12Q8WYK0 555 aa10.28□□□□□ -0.76
COL28A1-206ENST00000465339 R3HDM4Q96D70 268 aa10.28□□□□□ -0.76
COL28A1-206ENST00000465339 RBMXL1Q96E39 390 aaKnown RBP10.28□□□□□ -0.76
COL28A1-206ENST00000465339 CMTM3Q96MX0 182 aa10.28□□□□□ -0.76
COL28A1-206ENST00000465339 OR2D2Q9H210 308 aa10.28□□□□□ -0.76
COL28A1-206ENST00000465339 SDHAF2Q9NX18 166 aa10.28□□□□□ -0.76
COL28A1-206ENST00000465339 ZNF107Q9UII5 783 aaPredicted RBP10.28□□□□□ -0.76
COL28A1-206ENST00000465339 ZNF580Q9UK33 172 aa10.28□□□□□ -0.76
COL28A1-206ENST00000465339 OR2W1Q9Y3N9 320 aa10.28□□□□□ -0.76
COL28A1-206ENST00000465339 M0R1X1 148 aa10.27□□□□□ -0.77
COL28A1-206ENST00000465339 SLC22A5O76082 557 aa10.27□□□□□ -0.77
COL28A1-206ENST00000465339 GABARAPO95166 117 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms