RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 VSIG4Q9Y279 399 aa5.69□□□□□ -1.5
PTPRF-210ENST00000463041 WASHC3Q9Y3C0 194 aa5.69□□□□□ -1.5
PTPRF-210ENST00000463041 NUBP2Q9Y5Y2 271 aa5.69□□□□□ -1.5
PTPRF-210ENST00000463041 WSB1Q9Y6I7 421 aa5.69□□□□□ -1.5
PTPRF-210ENST00000463041 TRAV41A0A0B4J266 112 aa5.68□□□□□ -1.5
PTPRF-210ENST00000463041 TMEM272A0A1B0GTI8 110 aa5.68□□□□□ -1.5
PTPRF-210ENST00000463041 METTL21EPA6NDL7 271 aa5.68□□□□□ -1.5
PTPRF-210ENST00000463041 IFITM5A6NNB3 132 aa5.68□□□□□ -1.5
PTPRF-210ENST00000463041 G3V318 75 aa5.68□□□□□ -1.5
PTPRF-210ENST00000463041 H0YJW9 148 aa5.68□□□□□ -1.5
PTPRF-210ENST00000463041 H7C2Y5 167 aa5.68□□□□□ -1.5
PTPRF-210ENST00000463041 ATP6V0E1O15342 81 aa5.68□□□□□ -1.5
PTPRF-210ENST00000463041 PROP1O75360 226 aa5.68□□□□□ -1.5
PTPRF-210ENST00000463041 DIRAS3O95661 229 aa5.68□□□□□ -1.5
PTPRF-210ENST00000463041 CD3GP09693 182 aa5.68□□□□□ -1.5
PTPRF-210ENST00000463041 RAB3BP20337 219 aa5.68□□□□□ -1.5
PTPRF-210ENST00000463041 RAB6AP20340 208 aa5.68□□□□□ -1.5
PTPRF-210ENST00000463041 GADD45AP24522 165 aa5.68□□□□□ -1.5
PTPRF-210ENST00000463041 CRIP2P52943 208 aaPredicted RBP5.68□□□□□ -1.5
PTPRF-210ENST00000463041 RAB25P57735 213 aa5.68□□□□□ -1.5
PTPRF-210ENST00000463041 CX3CL1P78423 397 aa5.68□□□□□ -1.5
PTPRF-210ENST00000463041 ARL6IP1Q15041 203 aa5.68□□□□□ -1.5
PTPRF-210ENST00000463041 SSX1Q16384 188 aa5.68□□□□□ -1.5
PTPRF-210ENST00000463041 SRSF7Q16629 238 aaKnown RBP eCLIP5.68□□□□□ -1.5
PTPRF-210ENST00000463041 AKIRIN2Q53H80 203 aa5.68□□□□□ -1.5
PTPRF-210ENST00000463041 RPL39P5Q59GN2 51 aa5.68□□□□□ -1.5
PTPRF-210ENST00000463041 PLAC9Q5JTB6 97 aa5.68□□□□□ -1.5
PTPRF-210ENST00000463041 C9orf66Q5T8R8 295 aa5.68□□□□□ -1.5
PTPRF-210ENST00000463041 HES5Q5TA89 166 aa5.68□□□□□ -1.5
PTPRF-210ENST00000463041 FAM131AQ6UXB0 335 aa5.68□□□□□ -1.5
PTPRF-210ENST00000463041 ZNF562Q6V9R5 426 aa5.68□□□□□ -1.5
PTPRF-210ENST00000463041 TCTEX1D1Q8N7M0 179 aa5.68□□□□□ -1.5
PTPRF-210ENST00000463041 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.68□□□□□ -1.5
PTPRF-210ENST00000463041 OR11H1Q8NG94 326 aa5.68□□□□□ -1.5
PTPRF-210ENST00000463041 OR4A4PQ8NGN8 299 aa5.68□□□□□ -1.5
PTPRF-210ENST00000463041 RAB3CQ96E17 227 aa5.68□□□□□ -1.5
PTPRF-210ENST00000463041 RBMXL1Q96E39 390 aaKnown RBP5.68□□□□□ -1.5
PTPRF-210ENST00000463041 DUX3Q96PT4 197 aa5.68□□□□□ -1.5
PTPRF-210ENST00000463041 TSNAXQ99598 290 aaKnown RBP5.68□□□□□ -1.5
PTPRF-210ENST00000463041 KLK15Q9H2R5 256 aa5.68□□□□□ -1.5
PTPRF-210ENST00000463041 PARP11Q9NR21 331 aa5.68□□□□□ -1.5
PTPRF-210ENST00000463041 OR1A1Q9P1Q5 309 aa5.68□□□□□ -1.5
PTPRF-210ENST00000463041 RNF150Q9ULK6 438 aa5.68□□□□□ -1.5
PTPRF-210ENST00000463041 IGKV1-6A0A0C4DH72 117 aa5.67□□□□□ -1.5
PTPRF-210ENST00000463041 I3L521 148 aa5.67□□□□□ -1.5
PTPRF-210ENST00000463041 RAB27BO00194 218 aa5.67□□□□□ -1.5
PTPRF-210ENST00000463041 FCN1O00602 326 aa5.67□□□□□ -1.5
PTPRF-210ENST00000463041 FABP7O15540 132 aa5.67□□□□□ -1.5
PTPRF-210ENST00000463041 TFAP2AP05549 437 aa5.67□□□□□ -1.5
PTPRF-210ENST00000463041 OR8U8P0C7N1 319 aa5.67□□□□□ -1.5
PTPRF-210ENST00000463041 EGR2P11161 476 aaPredicted RBP5.67□□□□□ -1.5
PTPRF-210ENST00000463041 MYL9P24844 172 aa5.67□□□□□ -1.5
PTPRF-210ENST00000463041 CD40LGP29965 261 aa5.67□□□□□ -1.5
PTPRF-210ENST00000463041 FGF9P31371 208 aaPredicted RBP5.67□□□□□ -1.5
PTPRF-210ENST00000463041 LGALS7P47929 136 aa5.67□□□□□ -1.5
PTPRF-210ENST00000463041 INSL3P51460 131 aa5.67□□□□□ -1.5
PTPRF-210ENST00000463041 GABARAPL2P60520 117 aa5.67□□□□□ -1.5
PTPRF-210ENST00000463041 RPS16P62249 146 aaKnown RBP5.67□□□□□ -1.5
PTPRF-210ENST00000463041 TAGLNQ01995 201 aaKnown RBP5.67□□□□□ -1.5
PTPRF-210ENST00000463041 ZNF616Q08AN1 781 aa5.67□□□□□ -1.5
PTPRF-210ENST00000463041 FHL3Q13643 280 aa5.67□□□□□ -1.5
PTPRF-210ENST00000463041 PLGLAQ15195 96 aa5.67□□□□□ -1.5
PTPRF-210ENST00000463041 DEFB136Q30KP8 78 aa5.67□□□□□ -1.5
PTPRF-210ENST00000463041 PYHIN1Q6K0P9 492 aa5.67□□□□□ -1.5
PTPRF-210ENST00000463041 GLDNQ6ZMI3 551 aaPredicted RBP5.67□□□□□ -1.5
PTPRF-210ENST00000463041 PDPNQ86YL7 162 aa5.67□□□□□ -1.5
PTPRF-210ENST00000463041 OR1N2Q8NGR9 330 aa5.67□□□□□ -1.5
PTPRF-210ENST00000463041 OR10R2Q8NGX6 335 aa5.67□□□□□ -1.5
PTPRF-210ENST00000463041 OR10J5Q8NHC4 309 aa5.67□□□□□ -1.5
PTPRF-210ENST00000463041 FLYWCH2Q96CP2 140 aaKnown RBP5.67□□□□□ -1.5
PTPRF-210ENST00000463041 PARP12Q9H0J9 701 aaKnown RBP5.67□□□□□ -1.5
PTPRF-210ENST00000463041 FBXL15Q9H469 300 aa5.67□□□□□ -1.5
PTPRF-210ENST00000463041 Q9H521 79 aa5.67□□□□□ -1.5
PTPRF-210ENST00000463041 NDUFB11Q9NX14 153 aa5.67□□□□□ -1.5
PTPRF-210ENST00000463041 RDH8Q9NYR8 311 aa5.67□□□□□ -1.5
PTPRF-210ENST00000463041 KCNK7Q9Y2U2 307 aa5.67□□□□□ -1.5
PTPRF-210ENST00000463041 TRBV6-7A0A0A0MS04 114 aa5.66□□□□□ -1.5
PTPRF-210ENST00000463041 SHISA3A0PJX4 238 aa5.66□□□□□ -1.5
PTPRF-210ENST00000463041 SEC14L6B5MCN3 397 aa5.66□□□□□ -1.5
PTPRF-210ENST00000463041 ARPC1BO15143 372 aaKnown RBP5.66□□□□□ -1.5
PTPRF-210ENST00000463041 BET1O15155 118 aa5.66□□□□□ -1.5
PTPRF-210ENST00000463041 SPDEFO95238 335 aa5.66□□□□□ -1.5
PTPRF-210ENST00000463041 APOA2P02652 100 aa5.66□□□□□ -1.5
PTPRF-210ENST00000463041 OR8U9P0C7N5 309 aa5.66□□□□□ -1.5
PTPRF-210ENST00000463041 GSTT2P0CG29 244 aa5.66□□□□□ -1.5
PTPRF-210ENST00000463041 GSTT2BP0CG30 244 aa5.66□□□□□ -1.5
PTPRF-210ENST00000463041 HIST1H1DP16402 221 aaKnown RBP5.66□□□□□ -1.5
PTPRF-210ENST00000463041 TALDO1P37837 337 aa5.66□□□□□ -1.5
PTPRF-210ENST00000463041 LUMP51884 338 aaPredicted RBP5.66□□□□□ -1.5
PTPRF-210ENST00000463041 OR10A3P58181 314 aa5.66□□□□□ -1.5
PTPRF-210ENST00000463041 PLA2G7Q13093 441 aa5.66□□□□□ -1.5
PTPRF-210ENST00000463041 PSG5Q15238 335 aa5.66□□□□□ -1.5
PTPRF-210ENST00000463041 C19orf54Q5BKX5 351 aa5.66□□□□□ -1.5
PTPRF-210ENST00000463041 VAX1Q5SQQ9 334 aa5.66□□□□□ -1.5
PTPRF-210ENST00000463041 UBE2UQ5VVX9 321 aa5.66□□□□□ -1.5
PTPRF-210ENST00000463041 C22orf42Q6IC83 251 aa5.66□□□□□ -1.5
PTPRF-210ENST00000463041 Q6ZS49 121 aa5.66□□□□□ -1.5
PTPRF-210ENST00000463041 TPRA1Q86W33 373 aa5.66□□□□□ -1.5
PTPRF-210ENST00000463041 PPP1R27Q86WC6 154 aa5.66□□□□□ -1.5
PTPRF-210ENST00000463041 SPARTQ8N0X7 666 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms