RNA–Protein interactions for RNA: ENST00000460957.1

GGA1-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 790 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-216ENST00000460957 ZNF260Q3ZCT1 412 aa12.59□□□□□ -0.39
GGA1-216ENST00000460957 STPG2Q8N412 459 aa12.59□□□□□ -0.39
GGA1-216ENST00000460957 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.59□□□□□ -0.39
GGA1-216ENST00000460957 S100A16Q96FQ6 103 aaKnown RBP12.59□□□□□ -0.39
GGA1-216ENST00000460957 DCSTAMPQ9H295 470 aa12.59□□□□□ -0.39
GGA1-216ENST00000460957 ELF5Q9UKW6 265 aaPredicted RBP12.59□□□□□ -0.39
GGA1-216ENST00000460957 TRBV6-7A0A0A0MS04 114 aa12.58□□□□□ -0.4
GGA1-216ENST00000460957 NUDT19A8MXV4 375 aa12.58□□□□□ -0.4
GGA1-216ENST00000460957 CT45A6P0DMU7 189 aa12.58□□□□□ -0.4
GGA1-216ENST00000460957 CT45A5P0DMU8 189 aa12.58□□□□□ -0.4
GGA1-216ENST00000460957 CT45A7P0DMV0 189 aa12.58□□□□□ -0.4
GGA1-216ENST00000460957 RPS19P39019 145 aaKnown RBP12.58□□□□□ -0.4
GGA1-216ENST00000460957 ARPC4P59998 168 aa12.58□□□□□ -0.4
GGA1-216ENST00000460957 CD83Q01151 205 aa12.58□□□□□ -0.4
GGA1-216ENST00000460957 COMMD1Q8N668 190 aa12.58□□□□□ -0.4
GGA1-216ENST00000460957 DRAXINQ8NBI3 349 aaPredicted RBP12.58□□□□□ -0.4
GGA1-216ENST00000460957 WIPF2Q8TF74 440 aaPredicted RBP12.58□□□□□ -0.4
GGA1-216ENST00000460957 ABHD5Q8WTS1 349 aa12.58□□□□□ -0.4
GGA1-216ENST00000460957 SLC25A38Q96DW6 304 aa12.58□□□□□ -0.4
GGA1-216ENST00000460957 RBMXL1Q96E39 390 aaKnown RBP12.58□□□□□ -0.4
GGA1-216ENST00000460957 AGMATQ9BSE5 352 aa12.58□□□□□ -0.4
GGA1-216ENST00000460957 MRPS26Q9BYN8 205 aaKnown RBP12.58□□□□□ -0.4
GGA1-216ENST00000460957 PLSCR3Q9NRY6 295 aa12.58□□□□□ -0.4
GGA1-216ENST00000460957 H0YJW9 148 aa12.57□□□□□ -0.4
GGA1-216ENST00000460957 J3QRK9 145 aa12.57□□□□□ -0.4
GGA1-216ENST00000460957 RBBP9O75884 186 aa12.57□□□□□ -0.4
GGA1-216ENST00000460957 CNTFRP26992 372 aa12.57□□□□□ -0.4
GGA1-216ENST00000460957 VBP1P61758 197 aa12.57□□□□□ -0.4
GGA1-216ENST00000460957 RPS16P62249 146 aaKnown RBP12.57□□□□□ -0.4
GGA1-216ENST00000460957 UBE2NLQ5JXB2 153 aa12.57□□□□□ -0.4
GGA1-216ENST00000460957 LIN54Q6MZP7 749 aa12.57□□□□□ -0.4
GGA1-216ENST00000460957 C10orf99Q6UWK7 81 aa12.57□□□□□ -0.4
GGA1-216ENST00000460957 Q6ZS49 121 aa12.57□□□□□ -0.4
GGA1-216ENST00000460957 FAM71E2Q8N5Q1 922 aa12.57□□□□□ -0.4
GGA1-216ENST00000460957 SAMD12Q8N8I0 201 aa12.57□□□□□ -0.4
GGA1-216ENST00000460957 TRIM64CA6NLI5 447 aa12.56□□□□□ -0.4
GGA1-216ENST00000460957 OR5H8P0DN80 308 aa12.56□□□□□ -0.4
GGA1-216ENST00000460957 NCS1P62166 190 aa12.56□□□□□ -0.4
GGA1-216ENST00000460957 CXorf66Q5JRM2 361 aaPredicted RBP12.56□□□□□ -0.4
GGA1-216ENST00000460957 TEX38Q6PEX7 206 aa12.56□□□□□ -0.4
GGA1-216ENST00000460957 CNIH2Q6PI25 160 aa12.56□□□□□ -0.4
GGA1-216ENST00000460957 OR13F1Q8NGS4 319 aa12.56□□□□□ -0.4
GGA1-216ENST00000460957 TSNAXQ99598 290 aaKnown RBP12.56□□□□□ -0.4
GGA1-216ENST00000460957 TOLLIPQ9H0E2 274 aa12.56□□□□□ -0.4
GGA1-216ENST00000460957 IFT46Q9NQC8 304 aa12.56□□□□□ -0.4
GGA1-216ENST00000460957 PARP11Q9NR21 331 aa12.56□□□□□ -0.4
GGA1-216ENST00000460957 SLC35D1Q9NTN3 355 aa12.56□□□□□ -0.4
GGA1-216ENST00000460957 IGKV1D-8A0A087WSZ0 117 aa12.55□□□□□ -0.4
GGA1-216ENST00000460957 SMIM31A0A1B0GVY4 71 aa12.55□□□□□ -0.4
GGA1-216ENST00000460957 LINC01548A6NM66 108 aa12.55□□□□□ -0.4
GGA1-216ENST00000460957 CD33P20138 364 aa12.55□□□□□ -0.4
GGA1-216ENST00000460957 CBX5P45973 191 aa12.55□□□□□ -0.4
GGA1-216ENST00000460957 LUMP51884 338 aaPredicted RBP12.55□□□□□ -0.4
GGA1-216ENST00000460957 RTL8BQ17RB0 113 aa12.55□□□□□ -0.4
GGA1-216ENST00000460957 C5orf64Q2M2E5 130 aa12.55□□□□□ -0.4
GGA1-216ENST00000460957 TMEM69Q5SWH9 247 aa12.55□□□□□ -0.4
GGA1-216ENST00000460957 GPR141Q7Z602 305 aa12.55□□□□□ -0.4
GGA1-216ENST00000460957 PDPNQ86YL7 162 aa12.55□□□□□ -0.4
GGA1-216ENST00000460957 H1FOOQ8IZA3 346 aaPredicted RBP12.55□□□□□ -0.4
GGA1-216ENST00000460957 BEST4Q8NFU0 473 aa12.55□□□□□ -0.4
GGA1-216ENST00000460957 NPBQ8NG41 125 aa12.55□□□□□ -0.4
GGA1-216ENST00000460957 OR5AN1Q8NGI8 311 aa12.55□□□□□ -0.4
GGA1-216ENST00000460957 FLYWCH2Q96CP2 140 aaKnown RBP12.55□□□□□ -0.4
GGA1-216ENST00000460957 KCTD12Q96CX2 325 aaKnown RBP12.55□□□□□ -0.4
GGA1-216ENST00000460957 RNF5Q99942 180 aa12.55□□□□□ -0.4
GGA1-216ENST00000460957 HSPB9Q9BQS6 159 aa12.55□□□□□ -0.4
GGA1-216ENST00000460957 SDHAF2Q9NX18 166 aa12.55□□□□□ -0.4
GGA1-216ENST00000460957 ANXA10Q9UJ72 324 aa12.55□□□□□ -0.4
GGA1-216ENST00000460957 RRHO14718 337 aa12.54□□□□□ -0.4
GGA1-216ENST00000460957 HLA-DRB1P01911 266 aa12.54□□□□□ -0.4
GGA1-216ENST00000460957 SMIM18P0DKX4 95 aa12.54□□□□□ -0.4
GGA1-216ENST00000460957 NFYAP23511 347 aaPredicted RBP12.54□□□□□ -0.4
GGA1-216ENST00000460957 THBS3P49746 956 aa12.54□□□□□ -0.4
GGA1-216ENST00000460957 RORCP51449 518 aa12.54□□□□□ -0.4
GGA1-216ENST00000460957 TAGLNQ01995 201 aaKnown RBP12.54□□□□□ -0.4
GGA1-216ENST00000460957 SLC25A46Q96AG3 418 aa12.54□□□□□ -0.4
GGA1-216ENST00000460957 ADTRPQ96IZ2 230 aa12.54□□□□□ -0.4
GGA1-216ENST00000460957 RITA1Q96K30 269 aa12.54□□□□□ -0.4
GGA1-216ENST00000460957 OR51J1Q9H342 316 aa12.54□□□□□ -0.4
GGA1-216ENST00000460957 FBXL15Q9H469 300 aa12.54□□□□□ -0.4
GGA1-216ENST00000460957 AUNIPQ9H7T9 357 aa12.54□□□□□ -0.4
GGA1-216ENST00000460957 ZFP57Q9NU63 452 aa12.54□□□□□ -0.4
GGA1-216ENST00000460957 COMMD3Q9UBI1 195 aa12.54□□□□□ -0.4
GGA1-216ENST00000460957 METTL1Q9UBP6 276 aaKnown RBP12.54□□□□□ -0.4
GGA1-216ENST00000460957 XRCC3O43542 346 aa12.53□□□□□ -0.4
GGA1-216ENST00000460957 SSX5O60225 188 aa12.53□□□□□ -0.4
GGA1-216ENST00000460957 SLC22A5O76082 557 aa12.53□□□□□ -0.4
GGA1-216ENST00000460957 NDUFA3O95167 84 aa12.53□□□□□ -0.4
GGA1-216ENST00000460957 FCER2P06734 321 aa12.53□□□□□ -0.4
GGA1-216ENST00000460957 RRASP10301 218 aa12.53□□□□□ -0.4
GGA1-216ENST00000460957 RPL23AP62750 156 aaKnown RBP12.53□□□□□ -0.4
GGA1-216ENST00000460957 DEFA6Q01524 100 aa12.53□□□□□ -0.4
GGA1-216ENST00000460957 TCTEX1D4Q5JR98 221 aa12.53□□□□□ -0.4
GGA1-216ENST00000460957 GPR107Q5VW38 600 aa12.53□□□□□ -0.4
GGA1-216ENST00000460957 MZT2AQ6P582 158 aa12.53□□□□□ -0.4
GGA1-216ENST00000460957 TMEM65Q6PI78 240 aa12.53□□□□□ -0.4
GGA1-216ENST00000460957 ZNF383Q8NA42 475 aa12.53□□□□□ -0.4
GGA1-216ENST00000460957 KLHL30-AS1Q8NEE0 82 aa12.53□□□□□ -0.4
GGA1-216ENST00000460957 CLCC1Q96S66 551 aa12.53□□□□□ -0.4
GGA1-216ENST00000460957 NECAP2Q9NVZ3 263 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms