RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 DIABLOQ9NR28 239 aa13.7□□□□□ -0.22
USP39-208ENST00000455732 GAB2Q9UQC2 676 aa13.7□□□□□ -0.22
USP39-208ENST00000455732 PRKDCP78527 4128 aaKnown RBP13.7□□□□□ -0.22
USP39-208ENST00000455732 SSX5O60225 188 aa13.69□□□□□ -0.22
USP39-208ENST00000455732 PROP1O75360 226 aa13.69□□□□□ -0.22
USP39-208ENST00000455732 CTXN2P0C2S0 81 aa13.69□□□□□ -0.22
USP39-208ENST00000455732 MC5RP33032 325 aa13.69□□□□□ -0.22
USP39-208ENST00000455732 NSUN5P1Q3KNT7 163 aa13.69□□□□□ -0.22
USP39-208ENST00000455732 TCTEX1D4Q5JR98 221 aa13.69□□□□□ -0.22
USP39-208ENST00000455732 UBE2NLQ5JXB2 153 aa13.69□□□□□ -0.22
USP39-208ENST00000455732 FAM131AQ6UXB0 335 aa13.69□□□□□ -0.22
USP39-208ENST00000455732 ANKRD13BQ86YJ7 626 aa13.69□□□□□ -0.22
USP39-208ENST00000455732 FOXRED2Q8IWF2 684 aa13.69□□□□□ -0.22
USP39-208ENST00000455732 H1FOOQ8IZA3 346 aaPredicted RBP13.69□□□□□ -0.22
USP39-208ENST00000455732 NPBQ8NG41 125 aa13.69□□□□□ -0.22
USP39-208ENST00000455732 OR4X2Q8NGF9 303 aa13.69□□□□□ -0.22
USP39-208ENST00000455732 GINS4Q9BRT9 223 aa13.69□□□□□ -0.22
USP39-208ENST00000455732 ZNF580Q9UK33 172 aa13.69□□□□□ -0.22
USP39-208ENST00000455732 TRAV18A0A075B6X5 111 aa13.68□□□□□ -0.22
USP39-208ENST00000455732 PSMB11A5LHX3 300 aa13.68□□□□□ -0.22
USP39-208ENST00000455732 AP4M1O00189 453 aa13.68□□□□□ -0.22
USP39-208ENST00000455732 NBR2O15453 112 aa13.68□□□□□ -0.22
USP39-208ENST00000455732 RBBP9O75884 186 aa13.68□□□□□ -0.22
USP39-208ENST00000455732 NDUFA3O95167 84 aa13.68□□□□□ -0.22
USP39-208ENST00000455732 SOX6P35712 828 aa13.68□□□□□ -0.22
USP39-208ENST00000455732 ALDH3B2P48448 385 aa13.68□□□□□ -0.22
USP39-208ENST00000455732 VBP1P61758 197 aa13.68□□□□□ -0.22
USP39-208ENST00000455732 STPG2Q8N412 459 aa13.68□□□□□ -0.22
USP39-208ENST00000455732 RBMXL1Q96E39 390 aaKnown RBP13.68□□□□□ -0.22
USP39-208ENST00000455732 RNF5Q99942 180 aa13.68□□□□□ -0.22
USP39-208ENST00000455732 ST6GALNAC5Q9BVH7 336 aa13.68□□□□□ -0.22
USP39-208ENST00000455732 OR2D2Q9H210 308 aa13.68□□□□□ -0.22
USP39-208ENST00000455732 AUNIPQ9H7T9 357 aa13.68□□□□□ -0.22
USP39-208ENST00000455732 RNF150Q9ULK6 438 aa13.68□□□□□ -0.22
USP39-208ENST00000455732 WASHC3Q9Y3C0 194 aa13.68□□□□□ -0.22
USP39-208ENST00000455732 XRCC3O43542 346 aa13.67□□□□□ -0.22
USP39-208ENST00000455732 HLA-DRB1P01911 266 aa13.67□□□□□ -0.22
USP39-208ENST00000455732 TFAP2AP05549 437 aa13.67□□□□□ -0.22
USP39-208ENST00000455732 OR8U9P0C7N5 309 aa13.67□□□□□ -0.22
USP39-208ENST00000455732 CTF1Q16619 201 aa13.67□□□□□ -0.22
USP39-208ENST00000455732 CNIH2Q6PI25 160 aa13.67□□□□□ -0.22
USP39-208ENST00000455732 C10orf99Q6UWK7 81 aa13.67□□□□□ -0.22
USP39-208ENST00000455732 GLDNQ6ZMI3 551 aaPredicted RBP13.67□□□□□ -0.22
USP39-208ENST00000455732 OR8U1Q8NH10 309 aa13.67□□□□□ -0.22
USP39-208ENST00000455732 RITA1Q96K30 269 aa13.67□□□□□ -0.22
USP39-208ENST00000455732 NOL4LQ96MY1 436 aaPredicted RBP13.67□□□□□ -0.22
USP39-208ENST00000455732 ANXA10Q9UJ72 324 aa13.67□□□□□ -0.22
USP39-208ENST00000455732 CNTFRP26992 372 aa13.66□□□□□ -0.22
USP39-208ENST00000455732 C5orf64Q2M2E5 130 aa13.66□□□□□ -0.22
USP39-208ENST00000455732 PDPNQ86YL7 162 aa13.66□□□□□ -0.22
USP39-208ENST00000455732 COMMD1Q8N668 190 aa13.66□□□□□ -0.22
USP39-208ENST00000455732 SAMD12Q8N8I0 201 aa13.66□□□□□ -0.22
USP39-208ENST00000455732 ZNF383Q8NA42 475 aa13.66□□□□□ -0.22
USP39-208ENST00000455732 OR4F17Q8NGA8 305 aa13.66□□□□□ -0.22
USP39-208ENST00000455732 S100A16Q96FQ6 103 aaKnown RBP13.66□□□□□ -0.22
USP39-208ENST00000455732 OR4F4Q96R69 305 aa13.66□□□□□ -0.22
USP39-208ENST00000455732 HSPB9Q9BQS6 159 aa13.66□□□□□ -0.22
USP39-208ENST00000455732 SDHAF2Q9NX18 166 aa13.66□□□□□ -0.22
USP39-208ENST00000455732 ZNF107Q9UII5 783 aaPredicted RBP13.66□□□□□ -0.22
USP39-208ENST00000455732 TSSC4Q9Y5U2 329 aaPredicted RBP13.66□□□□□ -0.22
USP39-208ENST00000455732 TCRBV4S1A1TA0A5B7 111 aa13.65□□□□□ -0.22
USP39-208ENST00000455732 LINC01548A6NM66 108 aa13.65□□□□□ -0.22
USP39-208ENST00000455732 M0R1X1 148 aa13.65□□□□□ -0.22
USP39-208ENST00000455732 APOA2P02652 100 aa13.65□□□□□ -0.22
USP39-208ENST00000455732 IGF1P05019 195 aa13.65□□□□□ -0.22
USP39-208ENST00000455732 SLC35B1P78383 322 aa13.65□□□□□ -0.22
USP39-208ENST00000455732 ZNF329Q86UD4 541 aa13.65□□□□□ -0.22
USP39-208ENST00000455732 HOGA1Q86XE5 327 aa13.65□□□□□ -0.22
USP39-208ENST00000455732 DRAXINQ8NBI3 349 aaPredicted RBP13.65□□□□□ -0.22
USP39-208ENST00000455732 ACOT12Q8WYK0 555 aa13.65□□□□□ -0.22
USP39-208ENST00000455732 C5orf30Q96GV9 206 aa13.65□□□□□ -0.22
USP39-208ENST00000455732 CMTM3Q96MX0 182 aa13.65□□□□□ -0.22
USP39-208ENST00000455732 GON7Q9BXV9 100 aa13.65□□□□□ -0.22
USP39-208ENST00000455732 NAA50Q9GZZ1 169 aaKnown RBP13.65□□□□□ -0.22
USP39-208ENST00000455732 KIAA1456Q9P272 454 aa13.65□□□□□ -0.22
USP39-208ENST00000455732 H7C2Y5 167 aa13.64□□□□□ -0.23
USP39-208ENST00000455732 SPDEFO95238 335 aa13.64□□□□□ -0.23
USP39-208ENST00000455732 CBX5P45973 191 aa13.64□□□□□ -0.23
USP39-208ENST00000455732 TAGLNQ01995 201 aaKnown RBP13.64□□□□□ -0.23
USP39-208ENST00000455732 CFHR3Q02985 330 aa13.64□□□□□ -0.23
USP39-208ENST00000455732 GPR141Q7Z602 305 aa13.64□□□□□ -0.23
USP39-208ENST00000455732 C1QL4Q86Z23 238 aa13.64□□□□□ -0.23
USP39-208ENST00000455732 BEST4Q8NFU0 473 aa13.64□□□□□ -0.23
USP39-208ENST00000455732 R3HDM4Q96D70 268 aa13.64□□□□□ -0.23
USP39-208ENST00000455732 LINC00527Q9UJ94 153 aa13.64□□□□□ -0.23
USP39-208ENST00000455732 OR2W1Q9Y3N9 320 aa13.64□□□□□ -0.23
USP39-208ENST00000455732 RRHO14718 337 aa13.63□□□□□ -0.23
USP39-208ENST00000455732 TUSC2O75896 110 aa13.63□□□□□ -0.23
USP39-208ENST00000455732 HLA-DQB1P01920 261 aa13.63□□□□□ -0.23
USP39-208ENST00000455732 APOA1P02647 267 aa13.63□□□□□ -0.23
USP39-208ENST00000455732 IGKV1-16P04430 117 aa13.63□□□□□ -0.23
USP39-208ENST00000455732 RORCP51449 518 aa13.63□□□□□ -0.23
USP39-208ENST00000455732 LINC00205P59089 165 aa13.63□□□□□ -0.23
USP39-208ENST00000455732 TMEM69Q5SWH9 247 aa13.63□□□□□ -0.23
USP39-208ENST00000455732 SAMD5Q5TGI4 173 aa13.63□□□□□ -0.23
USP39-208ENST00000455732 GPR107Q5VW38 600 aa13.63□□□□□ -0.23
USP39-208ENST00000455732 GVQW1Q8N7I0 195 aa13.63□□□□□ -0.23
USP39-208ENST00000455732 RBM7Q9Y580 266 aaKnown RBP13.63□□□□□ -0.23
USP39-208ENST00000455732 IGHV7-81A0A0B4J1V7 117 aa13.62□□□□□ -0.23
USP39-208ENST00000455732 G3V4G9 280 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 190.4 ms