RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 AQP6Q13520 282 aa3.12□□□□□ -1.91
LINC00393-202ENST00000452852 MAD2L1BPQ15013 274 aaPredicted RBP3.12□□□□□ -1.91
LINC00393-202ENST00000452852 ASCL4Q6XD76 172 aa3.12□□□□□ -1.91
LINC00393-202ENST00000452852 SLC35D2Q76EJ3 337 aa3.12□□□□□ -1.91
LINC00393-202ENST00000452852 TMEM179BQ7Z7N9 219 aa3.12□□□□□ -1.91
LINC00393-202ENST00000452852 LRP11Q86VZ4 500 aa3.12□□□□□ -1.91
LINC00393-202ENST00000452852 APRG1Q8IVJ8 170 aa3.12□□□□□ -1.91
LINC00393-202ENST00000452852 C1orf174Q8IYL3 243 aa3.12□□□□□ -1.91
LINC00393-202ENST00000452852 TMEM61Q8N0U2 210 aa3.12□□□□□ -1.91
LINC00393-202ENST00000452852 FAM58AQ8N1B3 248 aa3.12□□□□□ -1.91
LINC00393-202ENST00000452852 LRRC18Q8N456 261 aa3.12□□□□□ -1.91
LINC00393-202ENST00000452852 SLC22A24Q8N4F4 322 aa3.12□□□□□ -1.91
LINC00393-202ENST00000452852 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.12□□□□□ -1.91
LINC00393-202ENST00000452852 C3orf56Q8N813 242 aa3.12□□□□□ -1.91
LINC00393-202ENST00000452852 DRAXINQ8NBI3 349 aaPredicted RBP3.12□□□□□ -1.91
LINC00393-202ENST00000452852 OR4M2Q8NGB6 313 aa3.12□□□□□ -1.91
LINC00393-202ENST00000452852 OR6X1Q8NH79 312 aa3.12□□□□□ -1.91
LINC00393-202ENST00000452852 CLDND2Q8NHS1 167 aa3.12□□□□□ -1.91
LINC00393-202ENST00000452852 SH3GL3Q99963 347 aa3.12□□□□□ -1.91
LINC00393-202ENST00000452852 CHID1Q9BWS9 393 aa3.12□□□□□ -1.91
LINC00393-202ENST00000452852 SUCNR1Q9BXA5 334 aa3.12□□□□□ -1.91
LINC00393-202ENST00000452852 BCL2L14Q9BZR8 327 aa3.12□□□□□ -1.91
LINC00393-202ENST00000452852 SLC19A3Q9BZV2 496 aa3.12□□□□□ -1.91
LINC00393-202ENST00000452852 NTN4Q9HB63 628 aa3.12□□□□□ -1.91
LINC00393-202ENST00000452852 TMBIM4Q9HC24 238 aa3.12□□□□□ -1.91
LINC00393-202ENST00000452852 SLCO1B3Q9NPD5 702 aa3.12□□□□□ -1.91
LINC00393-202ENST00000452852 TMEM38BQ9NVV0 291 aa3.12□□□□□ -1.91
LINC00393-202ENST00000452852 SLC25A37Q9NYZ2 338 aa3.12□□□□□ -1.91
LINC00393-202ENST00000452852 VAPAQ9P0L0 249 aa3.12□□□□□ -1.91
LINC00393-202ENST00000452852 XCL2Q9UBD3 114 aa3.12□□□□□ -1.91
LINC00393-202ENST00000452852 ZNF229Q9UJW7 825 aa3.12□□□□□ -1.91
LINC00393-202ENST00000452852 NDUFAF1Q9Y375 327 aa3.12□□□□□ -1.91
LINC00393-202ENST00000452852 SONP18583 2426 aaKnown RBP3.12□□□□□ -1.91
LINC00393-202ENST00000452852 A0A1B0GVI7 797 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 ISPDA4D126 451 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 CENPBD1B2RD01 187 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 LRRN3E7EW58 273 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 NUPL2O15504 423 aaKnown RBP3.11□□□□□ -1.91
LINC00393-202ENST00000452852 FKBP6O75344 327 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 SNAP29O95721 258 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 OXTP01178 125 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 IFNA14P01570 189 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 OPN1SWP03999 348 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 ASAH2BP0C7U1 165 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 PGA4P0DJD7 388 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 PGA3P0DJD8 388 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 CCL2P13500 99 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 COL8A2P25067 703 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 RBM34P42696 430 aaKnown RBP3.11□□□□□ -1.91
LINC00393-202ENST00000452852 MTPNP58546 118 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 PCBD1P61457 104 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 GLO1Q04760 184 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 RPL18Q07020 188 aaKnown RBP3.11□□□□□ -1.91
LINC00393-202ENST00000452852 ARFRP1Q13795 201 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 KIAA0087Q14695 138 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 SGCAQ16586 387 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 ZSCAN26Q16670 478 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 RPEL1Q2QD12 228 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 C15orf32Q32M92 178 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 TCTEX1D4Q5JR98 221 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 PAGE3Q5JUK9 113 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 AVPI1Q5T686 147 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 ARL9Q6T311 187 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 COMTD1Q86VU5 262 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 ZNF584Q8IVC4 421 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 FUNDC1Q8IVP5 155 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 PNKDQ8N490 385 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 NOXO1Q8NFA2 376 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 OR4K5Q8NGD3 323 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 OR10R2Q8NGX6 335 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 C7orf33Q8WU49 177 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 YIPF5Q969M3 257 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 TLCD1Q96CP7 247 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 SGTBQ96EQ0 304 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 NICN1Q9BSH3 213 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 NDEL1Q9GZM8 345 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 OR51J1Q9H342 316 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 PLGRKTQ9HBL7 147 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 INIPQ9NRY2 104 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 ST3GAL6Q9Y274 331 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 MED31Q9Y3C7 131 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 GMEB1Q9Y692 573 aa3.11□□□□□ -1.91
LINC00393-202ENST00000452852 COL6A5A8TX70 2615 aa3.1□□□□□ -1.91
LINC00393-202ENST00000452852 IGLV3-9A0A075B6K5 115 aa3.1□□□□□ -1.91
LINC00393-202ENST00000452852 A0A0G2JND7 137 aa3.1□□□□□ -1.91
LINC00393-202ENST00000452852 C5orf49A4QMS7 147 aa3.1□□□□□ -1.91
LINC00393-202ENST00000452852 LYRM9A8MSI8 78 aa3.1□□□□□ -1.91
LINC00393-202ENST00000452852 H3BSA7 217 aa3.1□□□□□ -1.91
LINC00393-202ENST00000452852 XKRYO14609 159 aa3.1□□□□□ -1.91
LINC00393-202ENST00000452852 FOXH1O75593 365 aa3.1□□□□□ -1.91
LINC00393-202ENST00000452852 RP2O75695 350 aa3.1□□□□□ -1.91
LINC00393-202ENST00000452852 OR5F1O95221 314 aa3.1□□□□□ -1.91
LINC00393-202ENST00000452852 HBE1P02100 147 aa3.1□□□□□ -1.91
LINC00393-202ENST00000452852 GIPP09681 153 aaPredicted RBP3.1□□□□□ -1.91
LINC00393-202ENST00000452852 P0C879 139 aa3.1□□□□□ -1.91
LINC00393-202ENST00000452852 CHTF8P0CG12 524 aa3.1□□□□□ -1.91
LINC00393-202ENST00000452852 ZNF32P17041 273 aa3.1□□□□□ -1.91
LINC00393-202ENST00000452852 GPX4P36969 197 aaPredicted RBP3.1□□□□□ -1.91
LINC00393-202ENST00000452852 RND2P52198 227 aa3.1□□□□□ -1.91
LINC00393-202ENST00000452852 ERVS71-1P61550 626 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms