RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	METRN	Q9UJH8	293 aa		14.17	□□□□□ -0.14
TOM1-210	ENST00000449058	URB1	O60287	2271 aa	Known RBP	14.16	□□□□□ -0.14
TOM1-210	ENST00000449058	PTPRB	P23467	1997 aa		14.16	□□□□□ -0.14
TOM1-210	ENST00000449058	CHD3	Q12873	2000 aa	Known RBP	14.16	□□□□□ -0.14
TOM1-210	ENST00000449058	UBE2L5P	A0A1B0GUS4	154 aa		14.16	□□□□□ -0.14
TOM1-210	ENST00000449058		B4DEV8	164 aa		14.16	□□□□□ -0.14
TOM1-210	ENST00000449058	AP4M1	O00189	453 aa		14.16	□□□□□ -0.14
TOM1-210	ENST00000449058	ATXN7	O15265	892 aa	Predicted RBP	14.16	□□□□□ -0.14
TOM1-210	ENST00000449058	WT1	P19544	449 aa	Predicted RBP	14.16	□□□□□ -0.14
TOM1-210	ENST00000449058	RAB11A	P62491	216 aa		14.16	□□□□□ -0.14
TOM1-210	ENST00000449058	COL10A1	Q03692	680 aa		14.16	□□□□□ -0.14
TOM1-210	ENST00000449058	PMS2P11	Q13670	270 aa		14.16	□□□□□ -0.14
TOM1-210	ENST00000449058	SMIM21	Q3B7S5	101 aa		14.16	□□□□□ -0.14
TOM1-210	ENST00000449058	ZNF718	Q3SXZ3	478 aa		14.16	□□□□□ -0.14
TOM1-210	ENST00000449058	MBNL2	Q5VZF2	373 aa	Known RBP	14.16	□□□□□ -0.14
TOM1-210	ENST00000449058		Q8WTZ3	238 aa		14.16	□□□□□ -0.14
TOM1-210	ENST00000449058	CA5BP1	Q8WTZ4	195 aa		14.16	□□□□□ -0.14
TOM1-210	ENST00000449058	MSL2	Q9HCI7	577 aa		14.16	□□□□□ -0.14
TOM1-210	ENST00000449058	UFSP2	Q9NUQ7	469 aa		14.16	□□□□□ -0.14
TOM1-210	ENST00000449058	FZR1	Q9UM11	496 aa		14.16	□□□□□ -0.14
TOM1-210	ENST00000449058	USF3	Q68DE3	2245 aa		14.16	□□□□□ -0.14
TOM1-210	ENST00000449058	CLDN14	O95500	239 aa		14.16	□□□□□ -0.14
TOM1-210	ENST00000449058	FABP6	P51161	128 aa		14.16	□□□□□ -0.14
TOM1-210	ENST00000449058	FGF8	P55075	233 aa	Predicted RBP	14.16	□□□□□ -0.14
TOM1-210	ENST00000449058	PAX5	Q02548	391 aa		14.16	□□□□□ -0.14
TOM1-210	ENST00000449058	OR8G2P	Q6IF36	304 aa		14.16	□□□□□ -0.14
TOM1-210	ENST00000449058	OR13A1	Q8NGR1	328 aa		14.16	□□□□□ -0.14
TOM1-210	ENST00000449058	TCTEX1D2	Q8WW35	142 aa		14.16	□□□□□ -0.14
TOM1-210	ENST00000449058	P2RX4	Q99571	388 aa		14.16	□□□□□ -0.14
TOM1-210	ENST00000449058	IGHV2OR16-5	A0A0B4J2B6	119 aa		14.15	□□□□□ -0.14
TOM1-210	ENST00000449058	NQO2	P16083	231 aa		14.15	□□□□□ -0.14
TOM1-210	ENST00000449058	ZNF343	Q6P1L6	599 aa		14.15	□□□□□ -0.14
TOM1-210	ENST00000449058	MRGPRG	Q86SM5	289 aa		14.15	□□□□□ -0.14
TOM1-210	ENST00000449058	DIDO1	Q9BTC0	2240 aa	Known RBP	14.15	□□□□□ -0.14
TOM1-210	ENST00000449058	IGHV1-18	A0A0C4DH31	117 aa		14.15	□□□□□ -0.14
TOM1-210	ENST00000449058	MAP1LC3B2	A6NCE7	125 aa		14.15	□□□□□ -0.14
TOM1-210	ENST00000449058	PMS2P5	A8MQ11	134 aa		14.15	□□□□□ -0.14
TOM1-210	ENST00000449058	RAB29	O14966	203 aa		14.15	□□□□□ -0.14
TOM1-210	ENST00000449058	CXCL1	P09341	107 aa		14.15	□□□□□ -0.14
TOM1-210	ENST00000449058	SSTR5	P35346	364 aa		14.15	□□□□□ -0.14
TOM1-210	ENST00000449058	RPS10	P46783	165 aa	Known RBP	14.15	□□□□□ -0.14
TOM1-210	ENST00000449058	ERVFRD-1	P60508	538 aa		14.15	□□□□□ -0.14
TOM1-210	ENST00000449058	ATP6V1F	Q16864	119 aa		14.15	□□□□□ -0.14
TOM1-210	ENST00000449058	BTNL3	Q6UXE8	466 aa		14.15	□□□□□ -0.14
TOM1-210	ENST00000449058	ZNF66	Q6ZN08	573 aa		14.15	□□□□□ -0.14
TOM1-210	ENST00000449058	MRPL37	Q9BZE1	423 aa	Known RBP	14.15	□□□□□ -0.14
TOM1-210	ENST00000449058	MAP1LC3B	Q9GZQ8	125 aa		14.15	□□□□□ -0.14
TOM1-210	ENST00000449058	CLN8	Q9UBY8	286 aa		14.15	□□□□□ -0.14
TOM1-210	ENST00000449058	VAX2	Q9UIW0	290 aa		14.15	□□□□□ -0.14
TOM1-210	ENST00000449058	TNFSF13	O75888	250 aa		14.14	□□□□□ -0.15
TOM1-210	ENST00000449058	IGKV1D-33	P01593	117 aa		14.14	□□□□□ -0.15
TOM1-210	ENST00000449058	IGKV1-33	P01594	117 aa		14.14	□□□□□ -0.15
TOM1-210	ENST00000449058	GCH1	P30793	250 aa		14.14	□□□□□ -0.15
TOM1-210	ENST00000449058	ELL	P55199	621 aa	Predicted RBP	14.14	□□□□□ -0.15
TOM1-210	ENST00000449058	PNRC1	Q12796	327 aa	Predicted RBP	14.14	□□□□□ -0.15
TOM1-210	ENST00000449058	TCEAL7	Q9BRU2	100 aa		14.14	□□□□□ -0.15
TOM1-210	ENST00000449058	ZNF71	Q9NQZ8	489 aa	Predicted RBP	14.14	□□□□□ -0.15
TOM1-210	ENST00000449058	PRR14L	Q5THK1	2151 aa		14.14	□□□□□ -0.15
TOM1-210	ENST00000449058	OR5H1	A6NKK0	313 aa		14.14	□□□□□ -0.15
TOM1-210	ENST00000449058	C15orf65	H3BRN8	121 aa		14.14	□□□□□ -0.15
TOM1-210	ENST00000449058	RPP25L	Q8N5L8	163 aa	Known RBP	14.14	□□□□□ -0.15
TOM1-210	ENST00000449058	CD177	Q8N6Q3	437 aa		14.14	□□□□□ -0.15
TOM1-210	ENST00000449058	TPRX1	Q8N7U7	411 aa		14.14	□□□□□ -0.15
TOM1-210	ENST00000449058	ZNF610	Q8N9Z0	462 aa		14.14	□□□□□ -0.15
TOM1-210	ENST00000449058	TAAR6	Q96RI8	345 aa		14.14	□□□□□ -0.15
TOM1-210	ENST00000449058	AGMAT	Q9BSE5	352 aa		14.14	□□□□□ -0.15
TOM1-210	ENST00000449058	TMEM147	Q9BVK8	224 aa		14.14	□□□□□ -0.15
TOM1-210	ENST00000449058	DKK4	Q9UBT3	224 aa		14.14	□□□□□ -0.15
TOM1-210	ENST00000449058	LINC00473	A8K010	186 aa		14.13	□□□□□ -0.15
TOM1-210	ENST00000449058	CGA	P01215	116 aa		14.13	□□□□□ -0.15
TOM1-210	ENST00000449058	CD55	P08174	381 aa		14.13	□□□□□ -0.15
TOM1-210	ENST00000449058	FTH1P19	P0C7X4	201 aa		14.13	□□□□□ -0.15
TOM1-210	ENST00000449058	HTD2	P86397	168 aa		14.13	□□□□□ -0.15
TOM1-210	ENST00000449058	TRAT1	Q6PIZ9	186 aa		14.13	□□□□□ -0.15
TOM1-210	ENST00000449058	C1orf174	Q8IYL3	243 aa		14.13	□□□□□ -0.15
TOM1-210	ENST00000449058	DTD1	Q8TEA8	209 aa		14.13	□□□□□ -0.15
TOM1-210	ENST00000449058	HSD17B10	Q99714	261 aa	Known RBP	14.13	□□□□□ -0.15
TOM1-210	ENST00000449058	LAMP3	Q9UQV4	416 aa		14.13	□□□□□ -0.15
TOM1-210	ENST00000449058	AHRR	A9YTQ3	701 aa		14.12	□□□□□ -0.15
TOM1-210	ENST00000449058	IFNA1	P01562	189 aa		14.12	□□□□□ -0.15
TOM1-210	ENST00000449058	S100A9	P06702	114 aa	Known RBP	14.12	□□□□□ -0.15
TOM1-210	ENST00000449058	DEFB124	Q8NES8	71 aa		14.12	□□□□□ -0.15
TOM1-210	ENST00000449058	LRRC29	Q8WV35	223 aa		14.12	□□□□□ -0.15
TOM1-210	ENST00000449058	STARD4	Q96DR4	205 aa		14.12	□□□□□ -0.15
TOM1-210	ENST00000449058	TMEM242	Q9NWH2	141 aa		14.12	□□□□□ -0.15
TOM1-210	ENST00000449058	CACNA1D	Q01668	2161 aa		14.12	□□□□□ -0.15
TOM1-210	ENST00000449058	IGHV3-43	A0A0B4J1X8	118 aa		14.12	□□□□□ -0.15
TOM1-210	ENST00000449058	ZG16	O60844	167 aa		14.12	□□□□□ -0.15
TOM1-210	ENST00000449058	ZNF737	O75373	536 aa		14.12	□□□□□ -0.15
TOM1-210	ENST00000449058	IGHV3-43D	P0DP04	118 aa		14.12	□□□□□ -0.15
TOM1-210	ENST00000449058	P2RY6	Q15077	328 aa		14.12	□□□□□ -0.15
TOM1-210	ENST00000449058	ACSM6	Q6P461	480 aa		14.12	□□□□□ -0.15
TOM1-210	ENST00000449058	SLC16A13	Q7RTY0	426 aa		14.12	□□□□□ -0.15
TOM1-210	ENST00000449058	H2BFWT	Q7Z2G1	175 aa		14.12	□□□□□ -0.15
TOM1-210	ENST00000449058	FAM169B	Q8N8A8	192 aa		14.12	□□□□□ -0.15
TOM1-210	ENST00000449058	NANP	Q8TBE9	248 aa		14.12	□□□□□ -0.15
TOM1-210	ENST00000449058	CIB3	Q96Q77	187 aa	Predicted RBP	14.12	□□□□□ -0.15
TOM1-210	ENST00000449058	OPN3	Q9H1Y3	402 aa	Predicted RBP	14.12	□□□□□ -0.15
TOM1-210	ENST00000449058	SDF2L1	Q9HCN8	221 aa		14.12	□□□□□ -0.15
TOM1-210	ENST00000449058	SLC39A9	Q9NUM3	307 aa		14.12	□□□□□ -0.15

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