RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 IGHV1-69-2A0A0G2JMI3 117 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 JTBO76095 146 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 CLDN1O95832 211 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 GAPDHP04406 335 aaKnown RBP8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 GPR12P47775 334 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 PPOXP50336 477 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 MST1LQ2TV78 715 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 HFEQ30201 348 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 NEUROG1Q92886 237 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 DCTN5Q9BTE1 182 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 SLC25A31Q9H0C2 315 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 GAL3ST2Q9H3Q3 398 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 GSX1Q9H4S2 264 aaPredicted RBP8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 SLC25A10Q9UBX3 287 aaPredicted RBP8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 RNF150Q9ULK6 438 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 PSG11Q9UQ72 335 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 AUP1Q9Y679 476 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 LINC00312Q9Y6C7 94 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 BORCS7-ASMTA0A0B4J1R7 106 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 IGHV3-43A0A0B4J1X8 118 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 NDUFB3O43676 98 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 CLDN14O95500 239 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 FSTL3O95633 263 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 IGHV3-43DP0DP04 118 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 LOXL3P58215 753 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 EIF4EBP1Q13541 118 aaPredicted RBP8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 ZNF585BQ52M93 769 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 LRRC10Q5BKY1 277 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 ZCCHC24Q8N2G6 241 aaKnown RBP8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 FAM216BQ8N7L0 139 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 TCTEX1D2Q8WW35 142 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 GPR146Q96CH1 333 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 RAB39BQ96DA2 213 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 C1orf159Q96HA4 380 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 AGMATQ9BSE5 352 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 LINC00574Q9H8X3 128 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 CYTL1Q9NRR1 136 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 SDHAF2Q9NX18 166 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 GFOD1Q9NXC2 390 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 COA4Q9NYJ1 87 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 IDI2-AS1Q9NZ38 188 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 KAAG1Q9UBP8 84 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 MMP24Q9Y5R2 645 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 DSCAML1Q8TD84 2053 aa8.76□□□□□ -1.01
VIPAS39-203ENST00000448935 CACNA1DQ01668 2161 aa8.75□□□□□ -1.01
VIPAS39-203ENST00000448935 ZFYVE26Q68DK2 2539 aa8.75□□□□□ -1.01
VIPAS39-203ENST00000448935 PKD1L2Q7Z442 2459 aa8.75□□□□□ -1.01
VIPAS39-203ENST00000448935 HCFC1P51610 2035 aa8.75□□□□□ -1.01
VIPAS39-203ENST00000448935 LAMA5O15230 3695 aa8.75□□□□□ -1.01
VIPAS39-203ENST00000448935 DEFB108AA8MXU0 73 aa8.75□□□□□ -1.01
VIPAS39-203ENST00000448935 FAM90A26D6RGX4 464 aa8.75□□□□□ -1.01
VIPAS39-203ENST00000448935 KCNAB3O43448 404 aa8.75□□□□□ -1.01
VIPAS39-203ENST00000448935 PITX3O75364 302 aa8.75□□□□□ -1.01
VIPAS39-203ENST00000448935 PLAUP00749 431 aa8.75□□□□□ -1.01
VIPAS39-203ENST00000448935 NMBP08949 121 aa8.75□□□□□ -1.01
VIPAS39-203ENST00000448935 RRASP10301 218 aa8.75□□□□□ -1.01
VIPAS39-203ENST00000448935 SELLP14151 372 aa8.75□□□□□ -1.01
VIPAS39-203ENST00000448935 NDUFB7P17568 137 aa8.75□□□□□ -1.01
VIPAS39-203ENST00000448935 KIR2DS2P43631 304 aa8.75□□□□□ -1.01
VIPAS39-203ENST00000448935 LPAR6P43657 344 aa8.75□□□□□ -1.01
VIPAS39-203ENST00000448935 TMEM33P57088 247 aa8.75□□□□□ -1.01
VIPAS39-203ENST00000448935 TFF3Q07654 80 aa8.75□□□□□ -1.01
VIPAS39-203ENST00000448935 LTC4SQ16873 150 aa8.75□□□□□ -1.01
VIPAS39-203ENST00000448935 C17orf58Q2M2W7 97 aa8.75□□□□□ -1.01
VIPAS39-203ENST00000448935 Q3ZCU0 254 aa8.75□□□□□ -1.01
VIPAS39-203ENST00000448935 COMMD7Q86VX2 200 aa8.75□□□□□ -1.01
VIPAS39-203ENST00000448935 SPAG16Q8N0X2 631 aa8.75□□□□□ -1.01
VIPAS39-203ENST00000448935 OR2C3Q8N628 320 aa8.75□□□□□ -1.01
VIPAS39-203ENST00000448935 DMBX1Q8NFW5 382 aa8.75□□□□□ -1.01
VIPAS39-203ENST00000448935 RAB40CQ96S21 281 aa8.75□□□□□ -1.01
VIPAS39-203ENST00000448935 DSPP15924 2871 aaKnown RBP8.75□□□□□ -1.01
VIPAS39-203ENST00000448935 BSNQ9UPA5 3926 aa8.74□□□□□ -1.01
VIPAS39-203ENST00000448935 LEUTXA8MZ59 168 aa8.74□□□□□ -1.01
VIPAS39-203ENST00000448935 IGKV1-39P01597 117 aa8.74□□□□□ -1.01
VIPAS39-203ENST00000448935 IGKV1D-39P04432 117 aa8.74□□□□□ -1.01
VIPAS39-203ENST00000448935 LOXP28300 417 aaPredicted RBP8.74□□□□□ -1.01
VIPAS39-203ENST00000448935 POLR2GP62487 172 aaKnown RBP eCLIP8.74□□□□□ -1.01
VIPAS39-203ENST00000448935 RPL23AP62750 156 aaKnown RBP8.74□□□□□ -1.01
VIPAS39-203ENST00000448935 BAXQ07812 192 aa8.74□□□□□ -1.01
VIPAS39-203ENST00000448935 TGIF2LYQ8IUE0 185 aa8.74□□□□□ -1.01
VIPAS39-203ENST00000448935 FGFRL1Q8N441 504 aa8.74□□□□□ -1.01
VIPAS39-203ENST00000448935 RNF141Q8WVD5 230 aa8.74□□□□□ -1.01
VIPAS39-203ENST00000448935 ABHD14AQ9BUJ0 271 aa8.74□□□□□ -1.01
VIPAS39-203ENST00000448935 RAB1BQ9H0U4 201 aa8.74□□□□□ -1.01
VIPAS39-203ENST00000448935 LYRM2Q9NU23 88 aaPredicted RBP8.74□□□□□ -1.01
VIPAS39-203ENST00000448935 DCAF16Q9NXF7 216 aa8.74□□□□□ -1.01
VIPAS39-203ENST00000448935 FBXL17Q9UF56 701 aa8.74□□□□□ -1.01
VIPAS39-203ENST00000448935 PRELID3BQ9Y3B1 194 aa8.74□□□□□ -1.01
VIPAS39-203ENST00000448935 SESN1Q9Y6P5 492 aa8.74□□□□□ -1.01
VIPAS39-203ENST00000448935 ICE1Q9Y2F5 2266 aa8.73□□□□□ -1.01
VIPAS39-203ENST00000448935 TOR1AO14656 332 aa8.73□□□□□ -1.01
VIPAS39-203ENST00000448935 TNFRSF13BO14836 293 aaPredicted RBP8.73□□□□□ -1.01
VIPAS39-203ENST00000448935 RAB29O14966 203 aa8.73□□□□□ -1.01
VIPAS39-203ENST00000448935 RBFOX2O43251 390 aaKnown RBP eCLIP8.73□□□□□ -1.01
VIPAS39-203ENST00000448935 SSSCA1O60232 199 aa8.73□□□□□ -1.01
VIPAS39-203ENST00000448935 MED6O75586 246 aa8.73□□□□□ -1.01
VIPAS39-203ENST00000448935 IGKV1-5P01602 117 aa8.73□□□□□ -1.01
VIPAS39-203ENST00000448935 DAOP14920 347 aa8.73□□□□□ -1.01
VIPAS39-203ENST00000448935 ARHGDIBP52566 201 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms