RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 EDDM3AQ14507 147 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 NEDD8Q15843 81 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 USF2Q15853 346 aaPredicted RBP5.52□□□□□ -1.53
HDAC9-216ENST00000446646 SLC22A6Q4U2R8 563 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 PAN3Q58A45 887 aaKnown RBP5.52□□□□□ -1.53
HDAC9-216ENST00000446646 NHLRC3Q5JS37 347 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 GLIPR1L1Q6UWM5 242 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 C11orf42Q8N5U0 333 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 CD177Q8N6Q3 437 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 TSPAN14Q8NG11 270 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 URM1Q9BTM9 101 aaKnown RBP5.52□□□□□ -1.53
HDAC9-216ENST00000446646 BARHL1Q9BZE3 327 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 TINAGL1Q9GZM7 467 aaPredicted RBP5.52□□□□□ -1.53
HDAC9-216ENST00000446646 C6orf62Q9GZU0 229 aaPredicted RBP5.52□□□□□ -1.53
HDAC9-216ENST00000446646 HEXA-AS1Q9H8Q6 139 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 OR6C3Q9NZP0 311 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 KIAA1456Q9P272 454 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 STUB1Q9UNE7 303 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 ST3GAL6Q9Y274 331 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 ZNF256Q9Y2P7 627 aaPredicted RBP5.52□□□□□ -1.53
HDAC9-216ENST00000446646 LINC00312Q9Y6C7 94 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 TRDV1A0A1B0GX56 115 aa5.51□□□□□ -1.53
HDAC9-216ENST00000446646 F2RL2O00254 374 aa5.51□□□□□ -1.53
HDAC9-216ENST00000446646 SSX5O60225 188 aa5.51□□□□□ -1.53
HDAC9-216ENST00000446646 DEDDO75618 318 aa5.51□□□□□ -1.53
HDAC9-216ENST00000446646 CDRT1O95170 752 aa5.51□□□□□ -1.53
HDAC9-216ENST00000446646 CALCBP10092 127 aa5.51□□□□□ -1.53
HDAC9-216ENST00000446646 ARSBP15848 533 aa5.51□□□□□ -1.53
HDAC9-216ENST00000446646 ERP29P30040 261 aaKnown RBP5.51□□□□□ -1.53
HDAC9-216ENST00000446646 MYCNOSP40205 109 aa5.51□□□□□ -1.53
HDAC9-216ENST00000446646 NPBWR2P48146 333 aa5.51□□□□□ -1.53
HDAC9-216ENST00000446646 P2RX3P56373 397 aa5.51□□□□□ -1.53
HDAC9-216ENST00000446646 RAB11BQ15907 218 aa5.51□□□□□ -1.53
HDAC9-216ENST00000446646 SSX2Q16385 188 aa5.51□□□□□ -1.53
HDAC9-216ENST00000446646 NDUFA5Q16718 116 aa5.51□□□□□ -1.53
HDAC9-216ENST00000446646 OR52W1Q6IF63 320 aa5.51□□□□□ -1.53
HDAC9-216ENST00000446646 BPIFCQ8NFQ6 507 aa5.51□□□□□ -1.53
HDAC9-216ENST00000446646 OR4X2Q8NGF9 303 aa5.51□□□□□ -1.53
HDAC9-216ENST00000446646 OR51T1Q8NGJ9 327 aa5.51□□□□□ -1.53
HDAC9-216ENST00000446646 OR13D1Q8NGV5 346 aa5.51□□□□□ -1.53
HDAC9-216ENST00000446646 OR10K1Q8NGX5 313 aa5.51□□□□□ -1.53
HDAC9-216ENST00000446646 KCNG3Q8TAE7 436 aa5.51□□□□□ -1.53
HDAC9-216ENST00000446646 KCTD7Q96MP8 289 aa5.51□□□□□ -1.53
HDAC9-216ENST00000446646 ZNF714Q96N38 554 aa5.51□□□□□ -1.53
HDAC9-216ENST00000446646 NEDD4LQ96PU5 975 aa5.51□□□□□ -1.53
HDAC9-216ENST00000446646 TMEM59Q9BXS4 323 aa5.51□□□□□ -1.53
HDAC9-216ENST00000446646 KRTAP4-2Q9BYR5 136 aa5.51□□□□□ -1.53
HDAC9-216ENST00000446646 CHST6Q9GZX3 395 aa5.51□□□□□ -1.53
HDAC9-216ENST00000446646 C19orf12Q9NSK7 152 aa5.51□□□□□ -1.53
HDAC9-216ENST00000446646 UBE2J1Q9Y385 318 aaPredicted RBP5.51□□□□□ -1.53
HDAC9-216ENST00000446646 SRRM2Q9UQ35 2752 aaKnown RBP5.5□□□□□ -1.53
HDAC9-216ENST00000446646 TRAV1-2A0A0B4J238 106 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 IGKV1-12A0A0C4DH73 117 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 TMEM30CPA0ZSE6 113 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 MAGEA13PA6NCF6 341 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 SEC14L6B5MCN3 397 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 MCRIP1C9JLW8 97 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 F8WDY8 70 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 SLC17A2O00624 439 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 HSPB6O14558 160 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 CTDSP2O14595 271 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 ZNF737O75373 536 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 CA11O75493 328 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 SCGNO76038 276 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 IGKV1D-12P01611 117 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 ZNF728P0DKX0 622 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 MGMTP16455 207 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 RAB3BP20337 219 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 DUSP1P28562 367 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 GLP1RP43220 463 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 FHITP49789 147 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 FABP5Q01469 135 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 ATXN7L3Q14CW9 347 aaPredicted RBP5.5□□□□□ -1.53
HDAC9-216ENST00000446646 ABCA11PQ4W5N1 156 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 ATAD3CQ5T2N8 411 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 SYT6Q5T7P8 510 aaPredicted RBP5.5□□□□□ -1.53
HDAC9-216ENST00000446646 CD200R1LQ6Q8B3 271 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 ASCL4Q6XD76 172 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 ZNF782Q6ZMW2 699 aaPredicted RBP5.5□□□□□ -1.53
HDAC9-216ENST00000446646 FOXRED2Q8IWF2 684 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 COMMD1Q8N668 190 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 MINDY2Q8NBR6 621 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 KLHL30-AS1Q8NEE0 82 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 OR4M1Q8NGD0 313 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 OR4D6Q8NGJ1 314 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 ORAI1Q96D31 301 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 C5orf30Q96GV9 206 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 DPCDQ9BVM2 203 aaPredicted RBP5.5□□□□□ -1.53
HDAC9-216ENST00000446646 SELENOIQ9C0D9 397 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 RETNQ9HD89 108 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 C12orf4Q9NQ89 552 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 IL36RNQ9UBH0 155 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 PEF1Q9UBV8 284 aaKnown RBP5.5□□□□□ -1.53
HDAC9-216ENST00000446646 STEAP1Q9UHE8 339 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 V9GY05 133 aa5.5□□□□□ -1.53
HDAC9-216ENST00000446646 MEIKINA0A087WXM9 373 aa5.49□□□□□ -1.53
HDAC9-216ENST00000446646 ODAMA1E959 279 aa5.49□□□□□ -1.53
HDAC9-216ENST00000446646 MEX3AA1L020 520 aaKnown RBP5.49□□□□□ -1.53
HDAC9-216ENST00000446646 ZNF729A6NN14 1252 aaPredicted RBP5.49□□□□□ -1.53
HDAC9-216ENST00000446646 F8VVB4 439 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms