RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 GNB4Q9HAV0 340 aa15.8■□□□□ 0.12
NCKIPSD-206ENST00000439518 VSIG4Q9Y279 399 aa15.8■□□□□ 0.12
NCKIPSD-206ENST00000439518 WASHC3Q9Y3C0 194 aa15.8■□□□□ 0.12
NCKIPSD-206ENST00000439518 FBXO7Q9Y3I1 522 aa15.8■□□□□ 0.12
NCKIPSD-206ENST00000439518 TRAV1-2A0A0B4J238 106 aa15.79■□□□□ 0.12
NCKIPSD-206ENST00000439518 TMEM272A0A1B0GTI8 110 aa15.79■□□□□ 0.12
NCKIPSD-206ENST00000439518 RAMP3O60896 148 aa15.79■□□□□ 0.12
NCKIPSD-206ENST00000439518 RBBP9O75884 186 aa15.79■□□□□ 0.12
NCKIPSD-206ENST00000439518 RAB9AP51151 201 aa15.79■□□□□ 0.12
NCKIPSD-206ENST00000439518 CX3CL1P78423 397 aa15.79■□□□□ 0.12
NCKIPSD-206ENST00000439518 C9orf66Q5T8R8 295 aa15.79■□□□□ 0.12
NCKIPSD-206ENST00000439518 HES5Q5TA89 166 aa15.79■□□□□ 0.12
NCKIPSD-206ENST00000439518 CD200R1LQ6Q8B3 271 aa15.79■□□□□ 0.12
NCKIPSD-206ENST00000439518 OR11H1Q8NG94 326 aa15.79■□□□□ 0.12
NCKIPSD-206ENST00000439518 CNBD2Q96M20 576 aa15.79■□□□□ 0.12
NCKIPSD-206ENST00000439518 RNF5Q99942 180 aa15.79■□□□□ 0.12
NCKIPSD-206ENST00000439518 B9D2Q9BPU9 175 aa15.79■□□□□ 0.12
NCKIPSD-206ENST00000439518 SCOCQ9UIL1 159 aa15.79■□□□□ 0.12
NCKIPSD-206ENST00000439518 RAB22AQ9UL26 194 aa15.79■□□□□ 0.12
NCKIPSD-206ENST00000439518 KCNK7Q9Y2U2 307 aa15.79■□□□□ 0.12
NCKIPSD-206ENST00000439518 SHISA3A0PJX4 238 aa15.78■□□□□ 0.12
NCKIPSD-206ENST00000439518 SEC14L6B5MCN3 397 aa15.78■□□□□ 0.12
NCKIPSD-206ENST00000439518 TRDCB7Z8K6 153 aa15.78■□□□□ 0.12
NCKIPSD-206ENST00000439518 H7C2Y5 167 aa15.78■□□□□ 0.12
NCKIPSD-206ENST00000439518 FCN1O00602 326 aa15.78■□□□□ 0.12
NCKIPSD-206ENST00000439518 SOX15O60248 233 aa15.78■□□□□ 0.12
NCKIPSD-206ENST00000439518 GSTP1P09211 210 aaKnown RBP15.78■□□□□ 0.12
NCKIPSD-206ENST00000439518 EGR2P11161 476 aaPredicted RBP15.78■□□□□ 0.12
NCKIPSD-206ENST00000439518 VAX1Q5SQQ9 334 aa15.78■□□□□ 0.12
NCKIPSD-206ENST00000439518 ASPHD1Q5U4P2 390 aa15.78■□□□□ 0.12
NCKIPSD-206ENST00000439518 DRAXINQ8NBI3 349 aaPredicted RBP15.78■□□□□ 0.12
NCKIPSD-206ENST00000439518 BLOC1S6Q9UL45 172 aa15.78■□□□□ 0.12
NCKIPSD-206ENST00000439518 RNF150Q9ULK6 438 aa15.78■□□□□ 0.12
NCKIPSD-206ENST00000439518 NUBP2Q9Y5Y2 271 aa15.78■□□□□ 0.12
NCKIPSD-206ENST00000439518 OR10A3P58181 314 aa15.77■□□□□ 0.12
NCKIPSD-206ENST00000439518 DCTN2Q13561 401 aaKnown RBP15.77■□□□□ 0.12
NCKIPSD-206ENST00000439518 C11orf87Q6NUJ2 197 aa15.77■□□□□ 0.12
NCKIPSD-206ENST00000439518 OR1N2Q8NGR9 330 aa15.77■□□□□ 0.12
NCKIPSD-206ENST00000439518 TOLLIPQ9H0E2 274 aa15.77■□□□□ 0.12
NCKIPSD-206ENST00000439518 NDUFB11Q9NX14 153 aa15.77■□□□□ 0.12
NCKIPSD-206ENST00000439518 RDH8Q9NYR8 311 aa15.77■□□□□ 0.12
NCKIPSD-206ENST00000439518 IFITM5A6NNB3 132 aa15.76■□□□□ 0.11
NCKIPSD-206ENST00000439518 PDCD5O14737 125 aa15.76■□□□□ 0.11
NCKIPSD-206ENST00000439518 LINC00205P59089 165 aa15.76■□□□□ 0.11
NCKIPSD-206ENST00000439518 GNB1P62873 340 aa15.76■□□□□ 0.11
NCKIPSD-206ENST00000439518 ZNF616Q08AN1 781 aa15.76■□□□□ 0.11
NCKIPSD-206ENST00000439518 PLGLAQ15195 96 aa15.76■□□□□ 0.11
NCKIPSD-206ENST00000439518 PSG5Q15238 335 aa15.76■□□□□ 0.11
NCKIPSD-206ENST00000439518 ECSCRQ19T08 205 aa15.76■□□□□ 0.11
NCKIPSD-206ENST00000439518 MOGAT2Q3SYC2 334 aa15.76■□□□□ 0.11
NCKIPSD-206ENST00000439518 ZNF383Q8NA42 475 aa15.76■□□□□ 0.11
NCKIPSD-206ENST00000439518 OR4A4PQ8NGN8 299 aa15.76■□□□□ 0.11
NCKIPSD-206ENST00000439518 RAB3CQ96E17 227 aa15.76■□□□□ 0.11
NCKIPSD-206ENST00000439518 OR5B12Q96R08 314 aa15.76■□□□□ 0.11
NCKIPSD-206ENST00000439518 ZNF221Q9UK13 617 aa15.76■□□□□ 0.11
NCKIPSD-206ENST00000439518 RAB26Q9ULW5 256 aa15.76■□□□□ 0.11
NCKIPSD-206ENST00000439518 GAB2Q9UQC2 676 aa15.76■□□□□ 0.11
NCKIPSD-206ENST00000439518 FOXA2Q9Y261 457 aaPredicted RBP15.76■□□□□ 0.11
NCKIPSD-206ENST00000439518 TRDV1A0A1B0GX56 115 aa15.75■□□□□ 0.11
NCKIPSD-206ENST00000439518 IGKV1-16P04430 117 aa15.75■□□□□ 0.11
NCKIPSD-206ENST00000439518 FCGR3AP08637 254 aa15.75■□□□□ 0.11
NCKIPSD-206ENST00000439518 OR8U8P0C7N1 319 aa15.75■□□□□ 0.11
NCKIPSD-206ENST00000439518 SNRPBP14678 240 aaKnown RBP15.75■□□□□ 0.11
NCKIPSD-206ENST00000439518 SERPINB10P48595 397 aa15.75■□□□□ 0.11
NCKIPSD-206ENST00000439518 CD69Q07108 199 aa15.75■□□□□ 0.11
NCKIPSD-206ENST00000439518 ZNF562Q6V9R5 426 aa15.75■□□□□ 0.11
NCKIPSD-206ENST00000439518 TCTEX1D1Q8N7M0 179 aa15.75■□□□□ 0.11
NCKIPSD-206ENST00000439518 DNAH9Q9NYC9 4486 aa15.75■□□□□ 0.11
NCKIPSD-206ENST00000439518 A0A1W2PN81 502 aa15.74■□□□□ 0.11
NCKIPSD-206ENST00000439518 RAB27BO00194 218 aa15.74■□□□□ 0.11
NCKIPSD-206ENST00000439518 FABP7O15540 132 aa15.74■□□□□ 0.11
NCKIPSD-206ENST00000439518 TFAP2AP05549 437 aa15.74■□□□□ 0.11
NCKIPSD-206ENST00000439518 CD3GP09693 182 aa15.74■□□□□ 0.11
NCKIPSD-206ENST00000439518 GALP22466 123 aa15.74■□□□□ 0.11
NCKIPSD-206ENST00000439518 CHRNA7P36544 502 aa15.74■□□□□ 0.11
NCKIPSD-206ENST00000439518 ZNF260Q3ZCT1 412 aa15.74■□□□□ 0.11
NCKIPSD-206ENST00000439518 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.74■□□□□ 0.11
NCKIPSD-206ENST00000439518 OR10R2Q8NGX6 335 aa15.74■□□□□ 0.11
NCKIPSD-206ENST00000439518 TSNAXQ99598 290 aaKnown RBP15.74■□□□□ 0.11
NCKIPSD-206ENST00000439518 CABLES2Q9BTV7 478 aa15.74■□□□□ 0.11
NCKIPSD-206ENST00000439518 METTL1Q9UBP6 276 aaKnown RBP15.74■□□□□ 0.11
NCKIPSD-206ENST00000439518 LSM4Q9Y4Z0 139 aaKnown RBP15.74■□□□□ 0.11
NCKIPSD-206ENST00000439518 A3GALT2U3KPV4 340 aa15.74■□□□□ 0.11
NCKIPSD-206ENST00000439518 NBEAL2Q6ZNJ1 2754 aa15.73■□□□□ 0.11
NCKIPSD-206ENST00000439518 MFNGO00587 321 aa15.73■□□□□ 0.11
NCKIPSD-206ENST00000439518 SPDEFO95238 335 aa15.73■□□□□ 0.11
NCKIPSD-206ENST00000439518 DIRAS3O95661 229 aa15.73■□□□□ 0.11
NCKIPSD-206ENST00000439518 RAB6AP20340 208 aa15.73■□□□□ 0.11
NCKIPSD-206ENST00000439518 MYL9P24844 172 aa15.73■□□□□ 0.11
NCKIPSD-206ENST00000439518 TMEM267Q0VDI3 215 aaPredicted RBP15.73■□□□□ 0.11
NCKIPSD-206ENST00000439518 AKIRIN2Q53H80 203 aa15.73■□□□□ 0.11
NCKIPSD-206ENST00000439518 IGSF11Q5DX21 431 aa15.73■□□□□ 0.11
NCKIPSD-206ENST00000439518 PPP1R27Q86WC6 154 aa15.73■□□□□ 0.11
NCKIPSD-206ENST00000439518 NR2C2APQ86WQ0 139 aa15.73■□□□□ 0.11
NCKIPSD-206ENST00000439518 PDPNQ86YL7 162 aa15.73■□□□□ 0.11
NCKIPSD-206ENST00000439518 TRBV6-7A0A0A0MS04 114 aa15.72■□□□□ 0.11
NCKIPSD-206ENST00000439518 M0R1X1 148 aa15.72■□□□□ 0.11
NCKIPSD-206ENST00000439518 MRPS14O60783 128 aaKnown RBP15.72■□□□□ 0.11
NCKIPSD-206ENST00000439518 GSTT2P0CG29 244 aa15.72■□□□□ 0.11
NCKIPSD-206ENST00000439518 GSTT2BP0CG30 244 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms