RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 RPEL1Q2QD12 228 aa9.87□□□□□ -0.83
PTCH1-208ENST00000430669 ACP7Q6ZNF0 438 aa9.87□□□□□ -0.83
PTCH1-208ENST00000430669 ZNRF4Q8WWF5 429 aa9.87□□□□□ -0.83
PTCH1-208ENST00000430669 CXCL2P19875 107 aa9.87□□□□□ -0.83
PTCH1-208ENST00000430669 PHYHD1Q5SRE7 291 aa9.87□□□□□ -0.83
PTCH1-208ENST00000430669 TMEM171Q8WVE6 324 aa9.87□□□□□ -0.83
PTCH1-208ENST00000430669 NPVFQ9HCQ7 196 aa9.87□□□□□ -0.83
PTCH1-208ENST00000430669 F2RL2O00254 374 aa9.87□□□□□ -0.83
PTCH1-208ENST00000430669 PEAR1Q5VY43 1037 aaPredicted RBP9.87□□□□□ -0.83
PTCH1-208ENST00000430669 POC1AQ8NBT0 407 aa9.87□□□□□ -0.83
PTCH1-208ENST00000430669 SLC24A4Q8NFF2 622 aa9.87□□□□□ -0.83
PTCH1-208ENST00000430669 TUBD1Q9UJT1 453 aa9.87□□□□□ -0.83
PTCH1-208ENST00000430669 A0A1B0GTI1 187 aa9.87□□□□□ -0.83
PTCH1-208ENST00000430669 FAM74A7A6NL05 159 aa9.87□□□□□ -0.83
PTCH1-208ENST00000430669 C11orf94C9JXX5 98 aa9.87□□□□□ -0.83
PTCH1-208ENST00000430669 TNXAQ16473 311 aa9.87□□□□□ -0.83
PTCH1-208ENST00000430669 OR4C13Q8NGP0 309 aa9.87□□□□□ -0.83
PTCH1-208ENST00000430669 A0A1W2PP11 408 aa9.87□□□□□ -0.83
PTCH1-208ENST00000430669 NEURL1O76050 574 aa9.87□□□□□ -0.83
PTCH1-208ENST00000430669 COX7A1P24310 79 aa9.87□□□□□ -0.83
PTCH1-208ENST00000430669 P2RY4P51582 365 aa9.87□□□□□ -0.83
PTCH1-208ENST00000430669 PLAC9Q5JTB6 97 aa9.87□□□□□ -0.83
PTCH1-208ENST00000430669 SELENOHQ8IZQ5 122 aaKnown RBP9.87□□□□□ -0.83
PTCH1-208ENST00000430669 C19orf24Q9BVV8 132 aa9.87□□□□□ -0.83
PTCH1-208ENST00000430669 TPPP3Q9BW30 176 aa9.87□□□□□ -0.83
PTCH1-208ENST00000430669 ZNF586Q9NXT0 402 aa9.87□□□□□ -0.83
PTCH1-208ENST00000430669 ZNF716A6NP11 495 aa9.87□□□□□ -0.83
PTCH1-208ENST00000430669 RAMP1O60894 148 aa9.87□□□□□ -0.83
PTCH1-208ENST00000430669 SPTBN2O15020 2390 aa9.87□□□□□ -0.83
PTCH1-208ENST00000430669 DYSFO75923 2080 aa9.87□□□□□ -0.83
PTCH1-208ENST00000430669 IGKV1D-43A0A0B4J1Z2 117 aa9.87□□□□□ -0.83
PTCH1-208ENST00000430669 APOBEC3AP31941 199 aaPredicted RBP9.87□□□□□ -0.83
PTCH1-208ENST00000430669 RSPO4Q2I0M5 234 aaPredicted RBP9.87□□□□□ -0.83
PTCH1-208ENST00000430669 ANKRD55Q3KP44 614 aa9.87□□□□□ -0.83
PTCH1-208ENST00000430669 GGNQ86UU5 652 aa9.86□□□□□ -0.83
PTCH1-208ENST00000430669 OR1B1Q8NGR6 318 aa9.86□□□□□ -0.83
PTCH1-208ENST00000430669 ITLN1Q8WWA0 313 aa9.86□□□□□ -0.83
PTCH1-208ENST00000430669 PLPPR2Q96GM1 343 aa9.86□□□□□ -0.83
PTCH1-208ENST00000430669 ZNF552Q9H707 407 aaPredicted RBP9.86□□□□□ -0.83
PTCH1-208ENST00000430669 CALYQ9NYX4 217 aa9.86□□□□□ -0.83
PTCH1-208ENST00000430669 ZNF835Q9Y2P0 537 aa9.86□□□□□ -0.83
PTCH1-208ENST00000430669 CACNA1HO95180 2353 aa9.86□□□□□ -0.83
PTCH1-208ENST00000430669 NECAP1Q8NC96 275 aa9.86□□□□□ -0.83
PTCH1-208ENST00000430669 GALNT14Q96FL9 552 aa9.86□□□□□ -0.83
PTCH1-208ENST00000430669 OR5I1Q13606 314 aa9.86□□□□□ -0.83
PTCH1-208ENST00000430669 CALHM1Q8IU99 346 aa9.86□□□□□ -0.83
PTCH1-208ENST00000430669 SMIM8Q96KF7 97 aa9.86□□□□□ -0.83
PTCH1-208ENST00000430669 TRBV23-1A0A0A0MS06 115 aa9.86□□□□□ -0.83
PTCH1-208ENST00000430669 SH2D7A6NKC9 451 aaPredicted RBP9.86□□□□□ -0.83
PTCH1-208ENST00000430669 DEFA6Q01524 100 aa9.86□□□□□ -0.83
PTCH1-208ENST00000430669 OR5R1Q8NH85 324 aa9.86□□□□□ -0.83
PTCH1-208ENST00000430669 BARX1Q9HBU1 254 aaPredicted RBP9.86□□□□□ -0.83
PTCH1-208ENST00000430669 CD1BP29016 333 aa9.86□□□□□ -0.83
PTCH1-208ENST00000430669 SELENOTP62341 195 aa9.86□□□□□ -0.83
PTCH1-208ENST00000430669 ZNF785A8K8V0 405 aa9.86□□□□□ -0.83
PTCH1-208ENST00000430669 CFDP00746 253 aaPredicted RBP9.86□□□□□ -0.83
PTCH1-208ENST00000430669 RANP62826 216 aaKnown RBP9.86□□□□□ -0.83
PTCH1-208ENST00000430669 TMEM187Q14656 261 aa9.86□□□□□ -0.83
PTCH1-208ENST00000430669 DCAF12L2Q5VW00 463 aa9.86□□□□□ -0.83
PTCH1-208ENST00000430669 CLEC2AQ6UVW9 174 aa9.86□□□□□ -0.83
PTCH1-208ENST00000430669 ZNF488Q96MN9 340 aa9.86□□□□□ -0.83
PTCH1-208ENST00000430669 IGHV1-2P23083 117 aa9.85□□□□□ -0.83
PTCH1-208ENST00000430669 BMPERQ8N8U9 685 aa9.85□□□□□ -0.83
PTCH1-208ENST00000430669 CISD1Q9NZ45 108 aaKnown RBP9.85□□□□□ -0.83
PTCH1-208ENST00000430669 ZNF320A2RRD8 509 aa9.85□□□□□ -0.83
PTCH1-208ENST00000430669 C17orf51A8MQB3 221 aa9.85□□□□□ -0.83
PTCH1-208ENST00000430669 CRYBA1P05813 215 aa9.85□□□□□ -0.83
PTCH1-208ENST00000430669 NPBWR2P48146 333 aa9.85□□□□□ -0.83
PTCH1-208ENST00000430669 H2BFSP57053 126 aa9.85□□□□□ -0.83
PTCH1-208ENST00000430669 MYPOPQ86VE0 399 aaPredicted RBP9.85□□□□□ -0.83
PTCH1-208ENST00000430669 SLC25A28Q96A46 364 aa9.85□□□□□ -0.83
PTCH1-208ENST00000430669 ZNF146Q15072 292 aa9.85□□□□□ -0.83
PTCH1-208ENST00000430669 IGHV2OR16-5A0A0B4J2B6 119 aa9.85□□□□□ -0.83
PTCH1-208ENST00000430669 SLC25A5P05141 298 aaKnown RBP9.85□□□□□ -0.83
PTCH1-208ENST00000430669 CFPP27918 469 aa9.85□□□□□ -0.83
PTCH1-208ENST00000430669 TNFRSF9Q07011 255 aa9.85□□□□□ -0.83
PTCH1-208ENST00000430669 ATP1A1-AS1Q5TC04 95 aa9.85□□□□□ -0.83
PTCH1-208ENST00000430669 PRR13Q9NZ81 148 aa9.85□□□□□ -0.83
PTCH1-208ENST00000430669 MARCH11A6NNE9 402 aa9.85□□□□□ -0.83
PTCH1-208ENST00000430669 FAM106CPP0CH98 169 aa9.85□□□□□ -0.83
PTCH1-208ENST00000430669 SHISA3A0PJX4 238 aa9.85□□□□□ -0.83
PTCH1-208ENST00000430669 MST1P26927 711 aa9.85□□□□□ -0.83
PTCH1-208ENST00000430669 RPL8P62917 257 aaKnown RBP9.85□□□□□ -0.83
PTCH1-208ENST00000430669 CCL8P80075 99 aa9.85□□□□□ -0.83
PTCH1-208ENST00000430669 C10orf113Q5VZT2 155 aa9.85□□□□□ -0.83
PTCH1-208ENST00000430669 TMEM186Q96B77 213 aa9.85□□□□□ -0.83
PTCH1-208ENST00000430669 TECTAO75443 2155 aa9.85□□□□□ -0.83
PTCH1-208ENST00000430669 CADP27708 2225 aa9.85□□□□□ -0.83
PTCH1-208ENST00000430669 IL18BPO95998 194 aa9.85□□□□□ -0.83
PTCH1-208ENST00000430669 HKR1P10072 659 aa9.85□□□□□ -0.83
PTCH1-208ENST00000430669 HNF1AP20823 631 aa9.85□□□□□ -0.83
PTCH1-208ENST00000430669 HIST3H3Q16695 136 aa9.84□□□□□ -0.83
PTCH1-208ENST00000430669 SPINK9Q5DT21 86 aa9.84□□□□□ -0.83
PTCH1-208ENST00000430669 OR1L1Q8NH94 360 aa9.84□□□□□ -0.83
PTCH1-208ENST00000430669 MARVELD3Q96A59 401 aa9.84□□□□□ -0.83
PTCH1-208ENST00000430669 PIMREGQ9BSJ6 248 aa9.84□□□□□ -0.83
PTCH1-208ENST00000430669 AKIRIN1Q9H9L7 192 aaPredicted RBP9.84□□□□□ -0.83
PTCH1-208ENST00000430669 A0A1W2PPQ1 181 aa9.84□□□□□ -0.83
PTCH1-208ENST00000430669 P2RX4Q99571 388 aa9.84□□□□□ -0.83
PTCH1-208ENST00000430669 TRAPPC1Q9Y5R8 145 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms