RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 TRAV18A0A075B6X5 111 aa13.6□□□□□ -0.23
LMCD1-204ENST00000426878 PSMB11A5LHX3 300 aa13.6□□□□□ -0.23
LMCD1-204ENST00000426878 AP4M1O00189 453 aa13.6□□□□□ -0.23
LMCD1-204ENST00000426878 SOX6P35712 828 aa13.6□□□□□ -0.23
LMCD1-204ENST00000426878 NCS1P62166 190 aa13.6□□□□□ -0.23
LMCD1-204ENST00000426878 FAM131AQ6UXB0 335 aa13.6□□□□□ -0.23
LMCD1-204ENST00000426878 ANKRD13BQ86YJ7 626 aa13.6□□□□□ -0.23
LMCD1-204ENST00000426878 H1FOOQ8IZA3 346 aaPredicted RBP13.6□□□□□ -0.23
LMCD1-204ENST00000426878 OR4X2Q8NGF9 303 aa13.6□□□□□ -0.23
LMCD1-204ENST00000426878 FAM110DQ8TAY7 271 aaPredicted RBP13.6□□□□□ -0.23
LMCD1-204ENST00000426878 RBMXL1Q96E39 390 aaKnown RBP13.6□□□□□ -0.23
LMCD1-204ENST00000426878 NOL4LQ96MY1 436 aaPredicted RBP13.6□□□□□ -0.23
LMCD1-204ENST00000426878 RNF5Q99942 180 aa13.6□□□□□ -0.23
LMCD1-204ENST00000426878 GINS4Q9BRT9 223 aa13.6□□□□□ -0.23
LMCD1-204ENST00000426878 ST6GALNAC5Q9BVH7 336 aa13.6□□□□□ -0.23
LMCD1-204ENST00000426878 MRPS26Q9BYN8 205 aaKnown RBP13.6□□□□□ -0.23
LMCD1-204ENST00000426878 LINC01548A6NM66 108 aa13.59□□□□□ -0.23
LMCD1-204ENST00000426878 NBR2O15453 112 aa13.59□□□□□ -0.23
LMCD1-204ENST00000426878 XRCC3O43542 346 aa13.59□□□□□ -0.23
LMCD1-204ENST00000426878 RBBP9O75884 186 aa13.59□□□□□ -0.23
LMCD1-204ENST00000426878 NDUFA3O95167 84 aa13.59□□□□□ -0.23
LMCD1-204ENST00000426878 TFAP2AP05549 437 aa13.59□□□□□ -0.23
LMCD1-204ENST00000426878 OR8U9P0C7N5 309 aa13.59□□□□□ -0.23
LMCD1-204ENST00000426878 NSUN5P1Q3KNT7 163 aa13.59□□□□□ -0.23
LMCD1-204ENST00000426878 CNIH2Q6PI25 160 aa13.59□□□□□ -0.23
LMCD1-204ENST00000426878 STPG2Q8N412 459 aa13.59□□□□□ -0.23
LMCD1-204ENST00000426878 OR8U1Q8NH10 309 aa13.59□□□□□ -0.23
LMCD1-204ENST00000426878 S100A16Q96FQ6 103 aaKnown RBP13.59□□□□□ -0.23
LMCD1-204ENST00000426878 AUNIPQ9H7T9 357 aa13.59□□□□□ -0.23
LMCD1-204ENST00000426878 WASHC3Q9Y3C0 194 aa13.59□□□□□ -0.23
LMCD1-204ENST00000426878 TSSC4Q9Y5U2 329 aaPredicted RBP13.59□□□□□ -0.23
LMCD1-204ENST00000426878 TCRBV4S1A1TA0A5B7 111 aa13.58□□□□□ -0.24
LMCD1-204ENST00000426878 HLA-DRB1P01911 266 aa13.58□□□□□ -0.24
LMCD1-204ENST00000426878 VBP1P61758 197 aa13.58□□□□□ -0.24
LMCD1-204ENST00000426878 SLC35B1P78383 322 aa13.58□□□□□ -0.24
LMCD1-204ENST00000426878 C5orf64Q2M2E5 130 aa13.58□□□□□ -0.24
LMCD1-204ENST00000426878 UBE2NLQ5JXB2 153 aa13.58□□□□□ -0.24
LMCD1-204ENST00000426878 C10orf99Q6UWK7 81 aa13.58□□□□□ -0.24
LMCD1-204ENST00000426878 GLDNQ6ZMI3 551 aaPredicted RBP13.58□□□□□ -0.24
LMCD1-204ENST00000426878 COMMD1Q8N668 190 aa13.58□□□□□ -0.24
LMCD1-204ENST00000426878 OR4F17Q8NGA8 305 aa13.58□□□□□ -0.24
LMCD1-204ENST00000426878 OR4F4Q96R69 305 aa13.58□□□□□ -0.24
LMCD1-204ENST00000426878 HSPB9Q9BQS6 159 aa13.58□□□□□ -0.24
LMCD1-204ENST00000426878 GON7Q9BXV9 100 aa13.58□□□□□ -0.24
LMCD1-204ENST00000426878 OR2D2Q9H210 308 aa13.58□□□□□ -0.24
LMCD1-204ENST00000426878 ANXA10Q9UJ72 324 aa13.58□□□□□ -0.24
LMCD1-204ENST00000426878 NOTCH1P46531 2555 aa13.58□□□□□ -0.24
LMCD1-204ENST00000426878 GABARAPO95166 117 aa13.57□□□□□ -0.24
LMCD1-204ENST00000426878 IGF1P05019 195 aa13.57□□□□□ -0.24
LMCD1-204ENST00000426878 CNTFRP26992 372 aa13.57□□□□□ -0.24
LMCD1-204ENST00000426878 ALDH3B2P48448 385 aa13.57□□□□□ -0.24
LMCD1-204ENST00000426878 CTF1Q16619 201 aa13.57□□□□□ -0.24
LMCD1-204ENST00000426878 ZNF329Q86UD4 541 aa13.57□□□□□ -0.24
LMCD1-204ENST00000426878 ZNF383Q8NA42 475 aa13.57□□□□□ -0.24
LMCD1-204ENST00000426878 SDHAF2Q9NX18 166 aa13.57□□□□□ -0.24
LMCD1-204ENST00000426878 KIAA1456Q9P272 454 aa13.57□□□□□ -0.24
LMCD1-204ENST00000426878 ZNF107Q9UII5 783 aaPredicted RBP13.57□□□□□ -0.24
LMCD1-204ENST00000426878 H7C2Y5 167 aa13.56□□□□□ -0.24
LMCD1-204ENST00000426878 TAGLNQ01995 201 aaKnown RBP13.56□□□□□ -0.24
LMCD1-204ENST00000426878 HOGA1Q86XE5 327 aa13.56□□□□□ -0.24
LMCD1-204ENST00000426878 PDPNQ86YL7 162 aa13.56□□□□□ -0.24
LMCD1-204ENST00000426878 SAMD12Q8N8I0 201 aa13.56□□□□□ -0.24
LMCD1-204ENST00000426878 DRAXINQ8NBI3 349 aaPredicted RBP13.56□□□□□ -0.24
LMCD1-204ENST00000426878 R3HDM4Q96D70 268 aa13.56□□□□□ -0.24
LMCD1-204ENST00000426878 CMTM3Q96MX0 182 aa13.56□□□□□ -0.24
LMCD1-204ENST00000426878 LINC00527Q9UJ94 153 aa13.56□□□□□ -0.24
LMCD1-204ENST00000426878 OR2W1Q9Y3N9 320 aa13.56□□□□□ -0.24
LMCD1-204ENST00000426878 M0R1X1 148 aa13.56□□□□□ -0.24
LMCD1-204ENST00000426878 RRHO14718 337 aa13.56□□□□□ -0.24
LMCD1-204ENST00000426878 HLA-DQB1P01920 261 aa13.56□□□□□ -0.24
LMCD1-204ENST00000426878 APOA2P02652 100 aa13.56□□□□□ -0.24
LMCD1-204ENST00000426878 CBX5P45973 191 aa13.56□□□□□ -0.24
LMCD1-204ENST00000426878 LINC00205P59089 165 aa13.56□□□□□ -0.24
LMCD1-204ENST00000426878 LIN54Q6MZP7 749 aa13.56□□□□□ -0.24
LMCD1-204ENST00000426878 BEST4Q8NFU0 473 aa13.56□□□□□ -0.24
LMCD1-204ENST00000426878 ACOT12Q8WYK0 555 aa13.56□□□□□ -0.24
LMCD1-204ENST00000426878 ZFP57Q9NU63 452 aa13.56□□□□□ -0.24
LMCD1-204ENST00000426878 RBM7Q9Y580 266 aaKnown RBP13.56□□□□□ -0.24
LMCD1-204ENST00000426878 TUSC2O75896 110 aa13.55□□□□□ -0.24
LMCD1-204ENST00000426878 SLC22A5O76082 557 aa13.55□□□□□ -0.24
LMCD1-204ENST00000426878 IGKV1-16P04430 117 aa13.55□□□□□ -0.24
LMCD1-204ENST00000426878 RORCP51449 518 aa13.55□□□□□ -0.24
LMCD1-204ENST00000426878 CFHR3Q02985 330 aa13.55□□□□□ -0.24
LMCD1-204ENST00000426878 GPR107Q5VW38 600 aa13.55□□□□□ -0.24
LMCD1-204ENST00000426878 TEX38Q6PEX7 206 aa13.55□□□□□ -0.24
LMCD1-204ENST00000426878 RNF152Q8N8N0 203 aa13.55□□□□□ -0.24
LMCD1-204ENST00000426878 C5orf30Q96GV9 206 aa13.55□□□□□ -0.24
LMCD1-204ENST00000426878 NAA50Q9GZZ1 169 aaKnown RBP13.55□□□□□ -0.24
LMCD1-204ENST00000426878 OR51J1Q9H342 316 aa13.55□□□□□ -0.24
LMCD1-204ENST00000426878 IGHV7-81A0A0B4J1V7 117 aa13.54□□□□□ -0.24
LMCD1-204ENST00000426878 SPDEFO95238 335 aa13.54□□□□□ -0.24
LMCD1-204ENST00000426878 APOA1P02647 267 aa13.54□□□□□ -0.24
LMCD1-204ENST00000426878 OR5H8P0DN80 308 aa13.54□□□□□ -0.24
LMCD1-204ENST00000426878 THBS3P49746 956 aa13.54□□□□□ -0.24
LMCD1-204ENST00000426878 LUMP51884 338 aaPredicted RBP13.54□□□□□ -0.24
LMCD1-204ENST00000426878 GPR141Q7Z602 305 aa13.54□□□□□ -0.24
LMCD1-204ENST00000426878 GVQW1Q8N7I0 195 aa13.54□□□□□ -0.24
LMCD1-204ENST00000426878 FLYWCH2Q96CP2 140 aaKnown RBP13.54□□□□□ -0.24
LMCD1-204ENST00000426878 ADTRPQ96IZ2 230 aa13.54□□□□□ -0.24
LMCD1-204ENST00000426878 TSNAXQ99598 290 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms