RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 ZNF439Q8NDP4 499 aa11.89□□□□□ -0.51
CDK3-201ENST00000425876 CD300LFQ8TDQ1 290 aa11.89□□□□□ -0.51
CDK3-201ENST00000425876 GPR146Q96CH1 333 aa11.89□□□□□ -0.51
CDK3-201ENST00000425876 ABHD14AQ9BUJ0 271 aa11.89□□□□□ -0.51
CDK3-201ENST00000425876 IFI27L2Q9H2X8 130 aa11.89□□□□□ -0.51
CDK3-201ENST00000425876 C19orf12Q9NSK7 152 aa11.89□□□□□ -0.51
CDK3-201ENST00000425876 CTSZQ9UBR2 303 aa11.89□□□□□ -0.51
CDK3-201ENST00000425876 ARID1AO14497 2285 aa11.89□□□□□ -0.51
CDK3-201ENST00000425876 TRBV23-1A0A0A0MS06 115 aa11.88□□□□□ -0.51
CDK3-201ENST00000425876 MSGN1A6NI15 193 aa11.88□□□□□ -0.51
CDK3-201ENST00000425876 C19orf84I3L1E1 186 aa11.88□□□□□ -0.51
CDK3-201ENST00000425876 DVL1O14640 695 aa11.88□□□□□ -0.51
CDK3-201ENST00000425876 TAAR5O14804 337 aa11.88□□□□□ -0.51
CDK3-201ENST00000425876 GPR37O15354 613 aa11.88□□□□□ -0.51
CDK3-201ENST00000425876 HKR1P10072 659 aa11.88□□□□□ -0.51
CDK3-201ENST00000425876 MMP9P14780 707 aa11.88□□□□□ -0.51
CDK3-201ENST00000425876 P2RY1P47900 373 aa11.88□□□□□ -0.51
CDK3-201ENST00000425876 ZNF134P52741 427 aa11.88□□□□□ -0.51
CDK3-201ENST00000425876 GPR157Q5UAW9 335 aa11.88□□□□□ -0.51
CDK3-201ENST00000425876 HEPN1Q6WQI6 88 aa11.88□□□□□ -0.51
CDK3-201ENST00000425876 FAM219AQ8IW50 185 aa11.88□□□□□ -0.51
CDK3-201ENST00000425876 FOXRED2Q8IWF2 684 aa11.88□□□□□ -0.51
CDK3-201ENST00000425876 TCTEX1D2Q8WW35 142 aa11.88□□□□□ -0.51
CDK3-201ENST00000425876 ZNF714Q96N38 554 aa11.88□□□□□ -0.51
CDK3-201ENST00000425876 LAMP3Q9UQV4 416 aa11.88□□□□□ -0.51
CDK3-201ENST00000425876 SETXQ7Z333 2677 aaKnown RBP11.88□□□□□ -0.51
CDK3-201ENST00000425876 PROP1O75360 226 aa11.88□□□□□ -0.51
CDK3-201ENST00000425876 IGKV1-5P01602 117 aa11.88□□□□□ -0.51
CDK3-201ENST00000425876 RPL12P30050 165 aaKnown RBP11.88□□□□□ -0.51
CDK3-201ENST00000425876 DUTP33316 252 aaKnown RBP11.88□□□□□ -0.51
CDK3-201ENST00000425876 LPAR6P43657 344 aa11.88□□□□□ -0.51
CDK3-201ENST00000425876 ZNF273Q14593 569 aa11.88□□□□□ -0.51
CDK3-201ENST00000425876 CT45A1Q5HYN5 189 aa11.88□□□□□ -0.51
CDK3-201ENST00000425876 TMEM200BQ69YZ2 307 aa11.88□□□□□ -0.51
CDK3-201ENST00000425876 SPAG16Q8N0X2 631 aa11.88□□□□□ -0.51
CDK3-201ENST00000425876 CT45A3Q8NHU0 189 aa11.88□□□□□ -0.51
CDK3-201ENST00000425876 STOML3Q8TAV4 291 aa11.88□□□□□ -0.51
CDK3-201ENST00000425876 SCARB1Q8WTV0 552 aa11.88□□□□□ -0.51
CDK3-201ENST00000425876 ST8SIA2Q92186 375 aa11.88□□□□□ -0.51
CDK3-201ENST00000425876 PHYHIPLQ96FC7 376 aa11.88□□□□□ -0.51
CDK3-201ENST00000425876 C11orf1Q9H5F2 150 aa11.88□□□□□ -0.51
CDK3-201ENST00000425876 COA4Q9NYJ1 87 aa11.88□□□□□ -0.51
CDK3-201ENST00000425876 RCL1Q9Y2P8 373 aaKnown RBP11.88□□□□□ -0.51
CDK3-201ENST00000425876 MMP24Q9Y5R2 645 aa11.88□□□□□ -0.51
CDK3-201ENST00000425876 COL12A1Q99715 3063 aa11.87□□□□□ -0.51
CDK3-201ENST00000425876 USF3Q68DE3 2245 aa11.87□□□□□ -0.51
CDK3-201ENST00000425876 A0A0G2JRQ6 117 aa11.87□□□□□ -0.51
CDK3-201ENST00000425876 A0A1W2PPR1 153 aa11.87□□□□□ -0.51
CDK3-201ENST00000425876 A6NNC1 897 aa11.87□□□□□ -0.51
CDK3-201ENST00000425876 F5H0A9 414 aaPredicted RBP11.87□□□□□ -0.51
CDK3-201ENST00000425876 RAB29O14966 203 aa11.87□□□□□ -0.51
CDK3-201ENST00000425876 RBFOX2O43251 390 aaKnown RBP eCLIP11.87□□□□□ -0.512e-8■■■■□ 23.6
CDK3-201ENST00000425876 KCNAB3O43448 404 aa11.87□□□□□ -0.51
CDK3-201ENST00000425876 DAOP14920 347 aa11.87□□□□□ -0.51
CDK3-201ENST00000425876 PVALBP20472 110 aaPredicted RBP11.87□□□□□ -0.51
CDK3-201ENST00000425876 AKR1C2P52895 323 aa11.87□□□□□ -0.51
CDK3-201ENST00000425876 BRWD1-AS2P59051 145 aa11.87□□□□□ -0.51
CDK3-201ENST00000425876 CLLU1Q5K131 121 aa11.87□□□□□ -0.51
CDK3-201ENST00000425876 OR8H3Q8N146 312 aa11.87□□□□□ -0.51
CDK3-201ENST00000425876 DMBX1Q8NFW5 382 aa11.87□□□□□ -0.51
CDK3-201ENST00000425876 RNASE11Q8TAA1 199 aaKnown RBP11.87□□□□□ -0.51
CDK3-201ENST00000425876 RAB39BQ96DA2 213 aa11.87□□□□□ -0.51
CDK3-201ENST00000425876 ZNF471Q9BX82 626 aaPredicted RBP11.87□□□□□ -0.51
CDK3-201ENST00000425876 GSX2Q9BZM3 304 aa11.87□□□□□ -0.51
CDK3-201ENST00000425876 LINC00473A8K010 186 aa11.86□□□□□ -0.51
CDK3-201ENST00000425876 C17orf98A8MV24 154 aa11.86□□□□□ -0.51
CDK3-201ENST00000425876 LYNX1G3V0Z9 82 aa11.86□□□□□ -0.51
CDK3-201ENST00000425876 P0C879 139 aa11.86□□□□□ -0.51
CDK3-201ENST00000425876 LYNX1P0DP58 116 aa11.86□□□□□ -0.51
CDK3-201ENST00000425876 NFYBP25208 207 aa11.86□□□□□ -0.51
CDK3-201ENST00000425876 KIR2DS2P43631 304 aa11.86□□□□□ -0.51
CDK3-201ENST00000425876 TMEM155Q4W5P6 130 aa11.86□□□□□ -0.51
CDK3-201ENST00000425876 CXorf66Q5JRM2 361 aaPredicted RBP11.86□□□□□ -0.51
CDK3-201ENST00000425876 PRAMEF5Q5TYX0 476 aa11.86□□□□□ -0.51
CDK3-201ENST00000425876 BTNL3Q6UXE8 466 aa11.86□□□□□ -0.51
CDK3-201ENST00000425876 SLC25A48Q6ZT89 311 aaKnown RBP11.86□□□□□ -0.51
CDK3-201ENST00000425876 SLC7A5P1Q8MH63 180 aa11.86□□□□□ -0.51
CDK3-201ENST00000425876 C8orf31Q8N9H6 132 aa11.86□□□□□ -0.51
CDK3-201ENST00000425876 H1FXQ92522 213 aaKnown RBP11.86□□□□□ -0.51
CDK3-201ENST00000425876 RAB1CQ92928 201 aa11.86□□□□□ -0.51
CDK3-201ENST00000425876 TIMD4Q96H15 378 aa11.86□□□□□ -0.51
CDK3-201ENST00000425876 FLNCQ14315 2725 aa11.85□□□□□ -0.51
CDK3-201ENST00000425876 RPS10-NUDT3A0A1W2PQS6 291 aa11.85□□□□□ -0.51
CDK3-201ENST00000425876 FAM90A26D6RGX4 464 aa11.85□□□□□ -0.51
CDK3-201ENST00000425876 SLC31A2O15432 143 aa11.85□□□□□ -0.51
CDK3-201ENST00000425876 GPR137BO60478 399 aa11.85□□□□□ -0.51
CDK3-201ENST00000425876 RAMP3O60896 148 aa11.85□□□□□ -0.51
CDK3-201ENST00000425876 MMP23AO75900 390 aa11.85□□□□□ -0.51
CDK3-201ENST00000425876 SPDEFO95238 335 aa11.85□□□□□ -0.51
CDK3-201ENST00000425876 RAB14P61106 215 aa11.85□□□□□ -0.51
CDK3-201ENST00000425876 NCR3LG1Q68D85 454 aa11.85□□□□□ -0.51
CDK3-201ENST00000425876 ZNF841Q6ZN19 808 aa11.85□□□□□ -0.51
CDK3-201ENST00000425876 Q6ZRM9 215 aa11.85□□□□□ -0.51
CDK3-201ENST00000425876 ADTRPQ96IZ2 230 aa11.85□□□□□ -0.51
CDK3-201ENST00000425876 CYTL1Q9NRR1 136 aa11.85□□□□□ -0.51
CDK3-201ENST00000425876 MIOXQ9UGB7 285 aa11.85□□□□□ -0.51
CDK3-201ENST00000425876 PRELID3BQ9Y3B1 194 aa11.85□□□□□ -0.51
CDK3-201ENST00000425876 HRNRQ86YZ3 2850 aaPredicted RBP11.84□□□□□ -0.51
CDK3-201ENST00000425876 KIAA1324LA8MWY0 1029 aaPredicted RBP11.84□□□□□ -0.51
CDK3-201ENST00000425876 M0R1X1 148 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms