RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 TMEM235A6NFC5 223 aa10.17□□□□□ -0.78
VRK3-203ENST00000424804 H7C2Y5 167 aa10.17□□□□□ -0.78
VRK3-203ENST00000424804 J3QRK9 145 aa10.17□□□□□ -0.78
VRK3-203ENST00000424804 RAB29O14966 203 aa10.17□□□□□ -0.78
VRK3-203ENST00000424804 MYCNOSP40205 109 aa10.17□□□□□ -0.78
VRK3-203ENST00000424804 GPR12P47775 334 aa10.17□□□□□ -0.78
VRK3-203ENST00000424804 SERPINB10P48595 397 aa10.17□□□□□ -0.78
VRK3-203ENST00000424804 GNG2P59768 71 aa10.17□□□□□ -0.78
VRK3-203ENST00000424804 ARL6IP1Q15041 203 aa10.17□□□□□ -0.78
VRK3-203ENST00000424804 MMDQ15546 238 aa10.17□□□□□ -0.78
VRK3-203ENST00000424804 ZNF833PQ6ZTB9 187 aa10.17□□□□□ -0.78
VRK3-203ENST00000424804 SLC35E3Q7Z769 313 aa10.17□□□□□ -0.78
VRK3-203ENST00000424804 STPG2Q8N412 459 aa10.17□□□□□ -0.78
VRK3-203ENST00000424804 OR4A4PQ8NGN8 299 aa10.17□□□□□ -0.78
VRK3-203ENST00000424804 OR10J5Q8NHC4 309 aa10.17□□□□□ -0.78
VRK3-203ENST00000424804 NUDCD2Q8WVJ2 157 aa10.17□□□□□ -0.78
VRK3-203ENST00000424804 RAX2Q96IS3 184 aa10.17□□□□□ -0.78
VRK3-203ENST00000424804 DUX3Q96PT4 197 aa10.17□□□□□ -0.78
VRK3-203ENST00000424804 B9D2Q9BPU9 175 aa10.17□□□□□ -0.78
VRK3-203ENST00000424804 GINS4Q9BRT9 223 aa10.17□□□□□ -0.78
VRK3-203ENST00000424804 ST6GALNAC5Q9BVH7 336 aa10.17□□□□□ -0.78
VRK3-203ENST00000424804 RDH8Q9NYR8 311 aa10.17□□□□□ -0.78
VRK3-203ENST00000424804 ZNF221Q9UK13 617 aa10.17□□□□□ -0.78
VRK3-203ENST00000424804 TRAV18A0A075B6X5 111 aa10.16□□□□□ -0.78
VRK3-203ENST00000424804 SCGNO76038 276 aa10.16□□□□□ -0.78
VRK3-203ENST00000424804 F2RL1P55085 397 aa10.16□□□□□ -0.78
VRK3-203ENST00000424804 CFHR3Q02985 330 aa10.16□□□□□ -0.78
VRK3-203ENST00000424804 LY6G6FQ5SQ64 297 aa10.16□□□□□ -0.78
VRK3-203ENST00000424804 FAM131AQ6UXB0 335 aa10.16□□□□□ -0.78
VRK3-203ENST00000424804 RNF152Q8N8N0 203 aa10.16□□□□□ -0.78
VRK3-203ENST00000424804 DRAXINQ8NBI3 349 aaPredicted RBP10.16□□□□□ -0.78
VRK3-203ENST00000424804 ZNF251Q9BRH9 671 aa10.16□□□□□ -0.78
VRK3-203ENST00000424804 FUNDC2Q9BWH2 189 aa10.16□□□□□ -0.78
VRK3-203ENST00000424804 ETV7Q9Y603 341 aa10.16□□□□□ -0.78
VRK3-203ENST00000424804 STAB2Q8WWQ8 2551 aa10.15□□□□□ -0.78
VRK3-203ENST00000424804 RPLP1P05386 114 aaKnown RBP10.15□□□□□ -0.78
VRK3-203ENST00000424804 FCER2P06734 321 aa10.15□□□□□ -0.78
VRK3-203ENST00000424804 OR8U9P0C7N5 309 aa10.15□□□□□ -0.78
VRK3-203ENST00000424804 CNTFRP26992 372 aa10.15□□□□□ -0.78
VRK3-203ENST00000424804 SLC6A1P30531 599 aa10.15□□□□□ -0.78
VRK3-203ENST00000424804 RPS19P39019 145 aaKnown RBP10.15□□□□□ -0.78
VRK3-203ENST00000424804 ACTBP60709 375 aa10.15□□□□□ -0.78
VRK3-203ENST00000424804 VBP1P61758 197 aa10.15□□□□□ -0.78
VRK3-203ENST00000424804 NCS1P62166 190 aa10.15□□□□□ -0.78
VRK3-203ENST00000424804 PLGLAQ15195 96 aa10.15□□□□□ -0.78
VRK3-203ENST00000424804 HACD4Q5VWC8 232 aa10.15□□□□□ -0.78
VRK3-203ENST00000424804 LCNL1Q6ZST4 164 aa10.15□□□□□ -0.78
VRK3-203ENST00000424804 FOXRED2Q8IWF2 684 aa10.15□□□□□ -0.78
VRK3-203ENST00000424804 OR8U1Q8NH10 309 aa10.15□□□□□ -0.78
VRK3-203ENST00000424804 SLC25A38Q96DW6 304 aa10.15□□□□□ -0.78
VRK3-203ENST00000424804 RITA1Q96K30 269 aa10.15□□□□□ -0.78
VRK3-203ENST00000424804 ABCG5Q9H222 651 aa10.15□□□□□ -0.78
VRK3-203ENST00000424804 KIAA1456Q9P272 454 aa10.15□□□□□ -0.78
VRK3-203ENST00000424804 LSM4Q9Y4Z0 139 aaKnown RBP10.15□□□□□ -0.78
VRK3-203ENST00000424804 SACSQ9NZJ4 4579 aa10.15□□□□□ -0.78
VRK3-203ENST00000424804 IGKV1D-8A0A087WSZ0 117 aa10.14□□□□□ -0.79
VRK3-203ENST00000424804 M0R1X1 148 aa10.14□□□□□ -0.79
VRK3-203ENST00000424804 GSTP1P09211 210 aaKnown RBP10.14□□□□□ -0.79
VRK3-203ENST00000424804 SMIM18P0DKX4 95 aa10.14□□□□□ -0.79
VRK3-203ENST00000424804 CT45A6P0DMU7 189 aa10.14□□□□□ -0.79
VRK3-203ENST00000424804 CT45A5P0DMU8 189 aa10.14□□□□□ -0.79
VRK3-203ENST00000424804 CT45A7P0DMV0 189 aa10.14□□□□□ -0.79
VRK3-203ENST00000424804 KIAA0141Q14154 515 aaPredicted RBP10.14□□□□□ -0.79
VRK3-203ENST00000424804 ZNF260Q3ZCT1 412 aa10.14□□□□□ -0.79
VRK3-203ENST00000424804 ZNF695Q8IW36 515 aa10.14□□□□□ -0.79
VRK3-203ENST00000424804 COMMD1Q8N668 190 aa10.14□□□□□ -0.79
VRK3-203ENST00000424804 KLHL30-AS1Q8NEE0 82 aa10.14□□□□□ -0.79
VRK3-203ENST00000424804 CABLES2Q9BTV7 478 aa10.14□□□□□ -0.79
VRK3-203ENST00000424804 OR2D2Q9H210 308 aa10.14□□□□□ -0.79
VRK3-203ENST00000424804 DIABLOQ9NR28 239 aa10.14□□□□□ -0.79
VRK3-203ENST00000424804 LIN7CQ9NUP9 197 aaKnown RBP10.14□□□□□ -0.79
VRK3-203ENST00000424804 RYR2Q92736 4967 aa10.14□□□□□ -0.79
VRK3-203ENST00000424804 TRBV6-7A0A0A0MS04 114 aa10.13□□□□□ -0.79
VRK3-203ENST00000424804 TRIM64CA6NLI5 447 aa10.13□□□□□ -0.79
VRK3-203ENST00000424804 CCL24O00175 119 aa10.13□□□□□ -0.79
VRK3-203ENST00000424804 PTHLHP12272 177 aa10.13□□□□□ -0.79
VRK3-203ENST00000424804 DTYMKP23919 212 aa10.13□□□□□ -0.79
VRK3-203ENST00000424804 SOX6P35712 828 aa10.13□□□□□ -0.79
VRK3-203ENST00000424804 LINC00205P59089 165 aa10.13□□□□□ -0.79
VRK3-203ENST00000424804 SLC35B1P78383 322 aa10.13□□□□□ -0.79
VRK3-203ENST00000424804 PITPNAQ00169 270 aa10.13□□□□□ -0.79
VRK3-203ENST00000424804 PNLIPRP3Q17RR3 467 aa10.13□□□□□ -0.79
VRK3-203ENST00000424804 DEFB136Q30KP8 78 aa10.13□□□□□ -0.79
VRK3-203ENST00000424804 FAM71F2Q6NXP2 309 aa10.13□□□□□ -0.79
VRK3-203ENST00000424804 CROCCP3Q8IVE0 287 aa10.13□□□□□ -0.79
VRK3-203ENST00000424804 FAM71E2Q8N5Q1 922 aa10.13□□□□□ -0.79
VRK3-203ENST00000424804 SAMD12Q8N8I0 201 aa10.13□□□□□ -0.79
VRK3-203ENST00000424804 OR8H1Q8NGG4 311 aa10.13□□□□□ -0.79
VRK3-203ENST00000424804 OR13F1Q8NGS4 319 aa10.13□□□□□ -0.79
VRK3-203ENST00000424804 HSPB9Q9BQS6 159 aa10.13□□□□□ -0.79
VRK3-203ENST00000424804 AGMATQ9BSE5 352 aa10.13□□□□□ -0.79
VRK3-203ENST00000424804 MCRIP2Q9BUT9 160 aaKnown RBP10.13□□□□□ -0.79
VRK3-203ENST00000424804 GPR61Q9BZJ8 451 aa10.13□□□□□ -0.79
VRK3-203ENST00000424804 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.13□□□□□ -0.79
VRK3-203ENST00000424804 ZNF107Q9UII5 783 aaPredicted RBP10.13□□□□□ -0.79
VRK3-203ENST00000424804 SCOCQ9UIL1 159 aa10.13□□□□□ -0.79
VRK3-203ENST00000424804 SPATA2Q9UM82 520 aa10.13□□□□□ -0.79
VRK3-203ENST00000424804 MEIS3P1A6NDR6 274 aa10.12□□□□□ -0.79
VRK3-203ENST00000424804 OR5H14A6NHG9 310 aa10.12□□□□□ -0.79
VRK3-203ENST00000424804 AP4M1O00189 453 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms