RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 R3HDM4Q96D70 268 aa20.84■□□□□ 0.93
CDK9-202ENST00000421939 GINS4Q9BRT9 223 aa20.84■□□□□ 0.93
CDK9-202ENST00000421939 FUNDC2Q9BWH2 189 aa20.84■□□□□ 0.93
CDK9-202ENST00000421939 SPATA2Q9UM82 520 aa20.84■□□□□ 0.93
CDK9-202ENST00000421939 TSSC4Q9Y5U2 329 aaPredicted RBP20.84■□□□□ 0.93
CDK9-202ENST00000421939 A0A0A6YYH2 397 aa20.83■□□□□ 0.93
CDK9-202ENST00000421939 A6NJ64 397 aa20.83■□□□□ 0.93
CDK9-202ENST00000421939 LINC01548A6NM66 108 aa20.83■□□□□ 0.93
CDK9-202ENST00000421939 NBR2O15453 112 aa20.83■□□□□ 0.93
CDK9-202ENST00000421939 RPS19P39019 145 aaKnown RBP20.83■□□□□ 0.93
CDK9-202ENST00000421939 KHDC1LQ5JSQ8 128 aa20.83■□□□□ 0.93
CDK9-202ENST00000421939 ZNF436-AS1Q8NC38 126 aaPredicted RBP20.83■□□□□ 0.93
CDK9-202ENST00000421939 OR5AN1Q8NGI8 311 aa20.83■□□□□ 0.93
CDK9-202ENST00000421939 OR13F1Q8NGS4 319 aa20.83■□□□□ 0.93
CDK9-202ENST00000421939 RITA1Q96K30 269 aa20.83■□□□□ 0.93
CDK9-202ENST00000421939 HSPB9Q9BQS6 159 aa20.83■□□□□ 0.93
CDK9-202ENST00000421939 DCSTAMPQ9H295 470 aa20.83■□□□□ 0.93
CDK9-202ENST00000421939 PROP1O75360 226 aa20.82■□□□□ 0.92
CDK9-202ENST00000421939 OR8U9P0C7N5 309 aa20.82■□□□□ 0.92
CDK9-202ENST00000421939 CNTFRP26992 372 aa20.82■□□□□ 0.92
CDK9-202ENST00000421939 MC5RP33032 325 aa20.82■□□□□ 0.92
CDK9-202ENST00000421939 SLC35B1P78383 322 aa20.82■□□□□ 0.92
CDK9-202ENST00000421939 OR8U1Q8NH10 309 aa20.82■□□□□ 0.92
CDK9-202ENST00000421939 ST6GALNAC5Q9BVH7 336 aa20.82■□□□□ 0.92
CDK9-202ENST00000421939 OR2D2Q9H210 308 aa20.82■□□□□ 0.92
CDK9-202ENST00000421939 ZNF107Q9UII5 783 aaPredicted RBP20.82■□□□□ 0.92
CDK9-202ENST00000421939 WASHC3Q9Y3C0 194 aa20.82■□□□□ 0.92
CDK9-202ENST00000421939 TRAV18A0A075B6X5 111 aa20.81■□□□□ 0.92
CDK9-202ENST00000421939 H7C2Y5 167 aa20.81■□□□□ 0.92
CDK9-202ENST00000421939 SSX5O60225 188 aa20.81■□□□□ 0.92
CDK9-202ENST00000421939 TFAP2AP05549 437 aa20.81■□□□□ 0.92
CDK9-202ENST00000421939 DRAXINQ8NBI3 349 aaPredicted RBP20.81■□□□□ 0.92
CDK9-202ENST00000421939 KIAA1456Q9P272 454 aa20.81■□□□□ 0.92
CDK9-202ENST00000421939 M0R1X1 148 aa20.8■□□□□ 0.92
CDK9-202ENST00000421939 NDUFA3O95167 84 aa20.8■□□□□ 0.92
CDK9-202ENST00000421939 NCS1P62166 190 aa20.8■□□□□ 0.92
CDK9-202ENST00000421939 C5orf64Q2M2E5 130 aa20.8■□□□□ 0.92
CDK9-202ENST00000421939 H1FOOQ8IZA3 346 aaPredicted RBP20.8■□□□□ 0.92
CDK9-202ENST00000421939 COMMD1Q8N668 190 aa20.8■□□□□ 0.92
CDK9-202ENST00000421939 NPBQ8NG41 125 aa20.8■□□□□ 0.92
CDK9-202ENST00000421939 DIABLOQ9NR28 239 aa20.8■□□□□ 0.92
CDK9-202ENST00000421939 RBBP9O75884 186 aa20.79■□□□□ 0.92
CDK9-202ENST00000421939 HLA-DRB1P01911 266 aa20.79■□□□□ 0.92
CDK9-202ENST00000421939 PF4V1P10720 104 aa20.79■□□□□ 0.92
CDK9-202ENST00000421939 ZNF383Q8NA42 475 aa20.79■□□□□ 0.92
CDK9-202ENST00000421939 SLC25A46Q96AG3 418 aa20.79■□□□□ 0.92
CDK9-202ENST00000421939 RBM7Q9Y580 266 aaKnown RBP20.79■□□□□ 0.92
CDK9-202ENST00000421939 APOA2P02652 100 aa20.78■□□□□ 0.92
CDK9-202ENST00000421939 CTXN2P0C2S0 81 aa20.78■□□□□ 0.92
CDK9-202ENST00000421939 GON7Q9BXV9 100 aa20.78■□□□□ 0.92
CDK9-202ENST00000421939 SDHAF2Q9NX18 166 aa20.78■□□□□ 0.92
CDK9-202ENST00000421939 ZNF580Q9UK33 172 aa20.78■□□□□ 0.92
CDK9-202ENST00000421939 GAB2Q9UQC2 676 aa20.78■□□□□ 0.92
CDK9-202ENST00000421939 LINC00205P59089 165 aa20.77■□□□□ 0.92
CDK9-202ENST00000421939 VBP1P61758 197 aa20.77■□□□□ 0.92
CDK9-202ENST00000421939 UBE2NLQ5JXB2 153 aa20.77■□□□□ 0.92
CDK9-202ENST00000421939 C5orf30Q96GV9 206 aa20.77■□□□□ 0.92
CDK9-202ENST00000421939 AUNIPQ9H7T9 357 aa20.77■□□□□ 0.92
CDK9-202ENST00000421939 ANXA10Q9UJ72 324 aa20.77■□□□□ 0.92
CDK9-202ENST00000421939 RRHO14718 337 aa20.76■□□□□ 0.91
CDK9-202ENST00000421939 IGF1P05019 195 aa20.76■□□□□ 0.91
CDK9-202ENST00000421939 CNIH2Q6PI25 160 aa20.76■□□□□ 0.91
CDK9-202ENST00000421939 PDPNQ86YL7 162 aa20.76■□□□□ 0.91
CDK9-202ENST00000421939 SAMD12Q8N8I0 201 aa20.76■□□□□ 0.91
CDK9-202ENST00000421939 KCTD12Q96CX2 325 aaKnown RBP20.76■□□□□ 0.91
CDK9-202ENST00000421939 RNF5Q99942 180 aa20.76■□□□□ 0.91
CDK9-202ENST00000421939 MRPS26Q9BYN8 205 aaKnown RBP20.76■□□□□ 0.91
CDK9-202ENST00000421939 IGKV1-16P04430 117 aa20.75■□□□□ 0.91
CDK9-202ENST00000421939 VDAC1P21796 283 aa20.75■□□□□ 0.91
CDK9-202ENST00000421939 RPL23AP62750 156 aaKnown RBP20.75■□□□□ 0.91
CDK9-202ENST00000421939 LIN54Q6MZP7 749 aa20.75■□□□□ 0.91
CDK9-202ENST00000421939 TEX38Q6PEX7 206 aa20.75■□□□□ 0.91
CDK9-202ENST00000421939 FBXL15Q9H469 300 aa20.75■□□□□ 0.91
CDK9-202ENST00000421939 SLC35D1Q9NTN3 355 aa20.75■□□□□ 0.91
CDK9-202ENST00000421939 IGHV7-81A0A0B4J1V7 117 aa20.74■□□□□ 0.91
CDK9-202ENST00000421939 XRCC3O43542 346 aa20.74■□□□□ 0.91
CDK9-202ENST00000421939 GABARAPO95166 117 aa20.74■□□□□ 0.91
CDK9-202ENST00000421939 CFHR3Q02985 330 aa20.74■□□□□ 0.91
CDK9-202ENST00000421939 PLGLAQ15195 96 aa20.74■□□□□ 0.91
CDK9-202ENST00000421939 S100A16Q96FQ6 103 aaKnown RBP20.74■□□□□ 0.91
CDK9-202ENST00000421939 OR51J1Q9H342 316 aa20.74■□□□□ 0.91
CDK9-202ENST00000421939 PARP11Q9NR21 331 aa20.74■□□□□ 0.91
CDK9-202ENST00000421939 ATP6V0E1O15342 81 aa20.73■□□□□ 0.91
CDK9-202ENST00000421939 SPDEFO95238 335 aa20.73■□□□□ 0.91
CDK9-202ENST00000421939 OR5H8P0DN80 308 aa20.73■□□□□ 0.91
CDK9-202ENST00000421939 NFYAP23511 347 aaPredicted RBP20.73■□□□□ 0.91
CDK9-202ENST00000421939 ANKRD13BQ86YJ7 626 aa20.73■□□□□ 0.91
CDK9-202ENST00000421939 GVQW1Q8N7I0 195 aa20.73■□□□□ 0.91
CDK9-202ENST00000421939 BEST4Q8NFU0 473 aa20.73■□□□□ 0.91
CDK9-202ENST00000421939 TSNAXQ99598 290 aaKnown RBP20.73■□□□□ 0.91
CDK9-202ENST00000421939 NAA50Q9GZZ1 169 aaKnown RBP20.73■□□□□ 0.91
CDK9-202ENST00000421939 ZFP57Q9NU63 452 aa20.73■□□□□ 0.91
CDK9-202ENST00000421939 OR2W1Q9Y3N9 320 aa20.73■□□□□ 0.91
CDK9-202ENST00000421939 PF4P02776 101 aa20.72■□□□□ 0.91
CDK9-202ENST00000421939 PTHLHP12272 177 aa20.72■□□□□ 0.91
CDK9-202ENST00000421939 THBS3P49746 956 aa20.72■□□□□ 0.91
CDK9-202ENST00000421939 DEFA6Q01524 100 aa20.72■□□□□ 0.91
CDK9-202ENST00000421939 FOXE3Q13461 319 aa20.72■□□□□ 0.91
CDK9-202ENST00000421939 HOGA1Q86XE5 327 aa20.72■□□□□ 0.91
CDK9-202ENST00000421939 FLYWCH2Q96CP2 140 aaKnown RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms