RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 TSPAN15O95858 294 aa8.78□□□□□ -1
TM9SF4-203ENST00000417389 APOA2P02652 100 aa8.78□□□□□ -1
TM9SF4-203ENST00000417389 SOX6P35712 828 aa8.78□□□□□ -1
TM9SF4-203ENST00000417389 F2RL1P55085 397 aa8.78□□□□□ -1
TM9SF4-203ENST00000417389 ACTBP60709 375 aa8.78□□□□□ -1
TM9SF4-203ENST00000417389 SLC35B1P78383 322 aa8.78□□□□□ -1
TM9SF4-203ENST00000417389 CBX3Q13185 183 aa8.78□□□□□ -1
TM9SF4-203ENST00000417389 EBI3Q14213 229 aa8.78□□□□□ -1
TM9SF4-203ENST00000417389 ZNF260Q3ZCT1 412 aa8.78□□□□□ -1
TM9SF4-203ENST00000417389 TMEM69Q5SWH9 247 aa8.78□□□□□ -1
TM9SF4-203ENST00000417389 FAM71F2Q6NXP2 309 aa8.78□□□□□ -1
TM9SF4-203ENST00000417389 NOL4LQ96MY1 436 aaPredicted RBP8.78□□□□□ -1
TM9SF4-203ENST00000417389 CITED2Q99967 270 aaPredicted RBP8.78□□□□□ -1
TM9SF4-203ENST00000417389 IFT46Q9NQC8 304 aa8.78□□□□□ -1
TM9SF4-203ENST00000417389 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.78□□□□□ -1
TM9SF4-203ENST00000417389 LIN7CQ9NUP9 197 aaKnown RBP8.78□□□□□ -1
TM9SF4-203ENST00000417389 CCDC59Q9P031 241 aaKnown RBP8.78□□□□□ -1
TM9SF4-203ENST00000417389 NDUFA13Q9P0J0 144 aa8.78□□□□□ -1
TM9SF4-203ENST00000417389 WASHC3Q9Y3C0 194 aa8.78□□□□□ -1
TM9SF4-203ENST00000417389 TRBV6-7A0A0A0MS04 114 aa8.77□□□□□ -1.01
TM9SF4-203ENST00000417389 A0A0A6YYH2 397 aa8.77□□□□□ -1.01
TM9SF4-203ENST00000417389 OR5H14A6NHG9 310 aa8.77□□□□□ -1.01
TM9SF4-203ENST00000417389 A6NJ64 397 aa8.77□□□□□ -1.01
TM9SF4-203ENST00000417389 ITGB1BP1O14713 200 aa8.77□□□□□ -1.01
TM9SF4-203ENST00000417389 KCNAB3O43448 404 aa8.77□□□□□ -1.01
TM9SF4-203ENST00000417389 OPN1MWP04001 364 aa8.77□□□□□ -1.01
TM9SF4-203ENST00000417389 CTXN2P0C2S0 81 aa8.77□□□□□ -1.01
TM9SF4-203ENST00000417389 CT45A6P0DMU7 189 aa8.77□□□□□ -1.01
TM9SF4-203ENST00000417389 CT45A5P0DMU8 189 aa8.77□□□□□ -1.01
TM9SF4-203ENST00000417389 CT45A7P0DMV0 189 aa8.77□□□□□ -1.01
TM9SF4-203ENST00000417389 OPN1MW2P0DN77 364 aa8.77□□□□□ -1.01
TM9SF4-203ENST00000417389 OPN1MW3P0DN78 364 aa8.77□□□□□ -1.01
TM9SF4-203ENST00000417389 MC5RP33032 325 aa8.77□□□□□ -1.01
TM9SF4-203ENST00000417389 ZNF329Q86UD4 541 aa8.77□□□□□ -1.01
TM9SF4-203ENST00000417389 Q8N6K4 173 aa8.77□□□□□ -1.01
TM9SF4-203ENST00000417389 Q8N9W7 124 aa8.77□□□□□ -1.01
TM9SF4-203ENST00000417389 ABHD5Q8WTS1 349 aa8.77□□□□□ -1.01
TM9SF4-203ENST00000417389 CHPT1Q8WUD6 406 aa8.77□□□□□ -1.01
TM9SF4-203ENST00000417389 ACOT12Q8WYK0 555 aa8.77□□□□□ -1.01
TM9SF4-203ENST00000417389 R3HDM4Q96D70 268 aa8.77□□□□□ -1.01
TM9SF4-203ENST00000417389 CABLES2Q9BTV7 478 aa8.77□□□□□ -1.01
TM9SF4-203ENST00000417389 WNT10AQ9GZT5 417 aa8.77□□□□□ -1.01
TM9SF4-203ENST00000417389 MMP27Q9H306 513 aa8.77□□□□□ -1.01
TM9SF4-203ENST00000417389 MRPS7Q9Y2R9 242 aaKnown RBP8.77□□□□□ -1.01
TM9SF4-203ENST00000417389 TET2Q6N021 2002 aaPredicted RBP8.76□□□□□ -1.01
TM9SF4-203ENST00000417389 IGKV1D-8A0A087WSZ0 117 aa8.76□□□□□ -1.01
TM9SF4-203ENST00000417389 DPPA5A6NC42 116 aa8.76□□□□□ -1.01
TM9SF4-203ENST00000417389 MEIS3P1A6NDR6 274 aa8.76□□□□□ -1.01
TM9SF4-203ENST00000417389 FAM25AB3EWG3 89 aa8.76□□□□□ -1.01
TM9SF4-203ENST00000417389 FAM25CB3EWG5 89 aa8.76□□□□□ -1.01
TM9SF4-203ENST00000417389 FAM25GB3EWG6 89 aa8.76□□□□□ -1.01
TM9SF4-203ENST00000417389 H0YJW9 148 aa8.76□□□□□ -1.01
TM9SF4-203ENST00000417389 AP4M1O00189 453 aa8.76□□□□□ -1.01
TM9SF4-203ENST00000417389 NBR2O15453 112 aa8.76□□□□□ -1.01
TM9SF4-203ENST00000417389 SSX5O60225 188 aa8.76□□□□□ -1.01
TM9SF4-203ENST00000417389 PF4V1P10720 104 aa8.76□□□□□ -1.01
TM9SF4-203ENST00000417389 PTHLHP12272 177 aa8.76□□□□□ -1.01
TM9SF4-203ENST00000417389 ZNF182P17025 639 aaPredicted RBP8.76□□□□□ -1.01
TM9SF4-203ENST00000417389 NFYAP23511 347 aaPredicted RBP8.76□□□□□ -1.01
TM9SF4-203ENST00000417389 CNTFRP26992 372 aa8.76□□□□□ -1.01
TM9SF4-203ENST00000417389 RPS16P62249 146 aaKnown RBP8.76□□□□□ -1.01
TM9SF4-203ENST00000417389 SRSF7Q16629 238 aaKnown RBP eCLIP8.76□□□□□ -1.01
TM9SF4-203ENST00000417389 MZT2AQ6P582 158 aa8.76□□□□□ -1.01
TM9SF4-203ENST00000417389 CNIH2Q6PI25 160 aa8.76□□□□□ -1.01
TM9SF4-203ENST00000417389 NDUFA11Q86Y39 141 aa8.76□□□□□ -1.01
TM9SF4-203ENST00000417389 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.76□□□□□ -1.01
TM9SF4-203ENST00000417389 BEST4Q8NFU0 473 aa8.76□□□□□ -1.01
TM9SF4-203ENST00000417389 DYNC2LI1Q8TCX1 351 aa8.76□□□□□ -1.01
TM9SF4-203ENST00000417389 RITA1Q96K30 269 aa8.76□□□□□ -1.01
TM9SF4-203ENST00000417389 AGMATQ9BSE5 352 aa8.76□□□□□ -1.01
TM9SF4-203ENST00000417389 ABCG5Q9H222 651 aa8.76□□□□□ -1.01
TM9SF4-203ENST00000417389 AUNIPQ9H7T9 357 aa8.76□□□□□ -1.01
TM9SF4-203ENST00000417389 ZNF107Q9UII5 783 aaPredicted RBP8.76□□□□□ -1.01
TM9SF4-203ENST00000417389 ANXA10Q9UJ72 324 aa8.76□□□□□ -1.01
TM9SF4-203ENST00000417389 NUDT19A8MXV4 375 aa8.75□□□□□ -1.01
TM9SF4-203ENST00000417389 XRCC3O43542 346 aa8.75□□□□□ -1.01
TM9SF4-203ENST00000417389 DIRAS3O95661 229 aa8.75□□□□□ -1.01
TM9SF4-203ENST00000417389 IGHG2P01859 326 aa8.75□□□□□ -1.01
TM9SF4-203ENST00000417389 VDAC1P21796 283 aa8.75□□□□□ -1.01
TM9SF4-203ENST00000417389 CBX5P45973 191 aa8.75□□□□□ -1.01
TM9SF4-203ENST00000417389 LUMP51884 338 aaPredicted RBP8.75□□□□□ -1.01
TM9SF4-203ENST00000417389 RTL8BQ17RB0 113 aa8.75□□□□□ -1.01
TM9SF4-203ENST00000417389 LIN54Q6MZP7 749 aa8.75□□□□□ -1.01
TM9SF4-203ENST00000417389 C10orf99Q6UWK7 81 aa8.75□□□□□ -1.01
TM9SF4-203ENST00000417389 Q6ZS49 121 aa8.75□□□□□ -1.01
TM9SF4-203ENST00000417389 H1FOOQ8IZA3 346 aaPredicted RBP8.75□□□□□ -1.01
TM9SF4-203ENST00000417389 STPG2Q8N412 459 aa8.75□□□□□ -1.01
TM9SF4-203ENST00000417389 GVQW1Q8N7I0 195 aa8.75□□□□□ -1.01
TM9SF4-203ENST00000417389 OR4F17Q8NGA8 305 aa8.75□□□□□ -1.01
TM9SF4-203ENST00000417389 OR4F4Q96R69 305 aa8.75□□□□□ -1.01
TM9SF4-203ENST00000417389 CLCC1Q96S66 551 aa8.75□□□□□ -1.01
TM9SF4-203ENST00000417389 DCUN1D5Q9BTE7 237 aa8.75□□□□□ -1.01
TM9SF4-203ENST00000417389 GON7Q9BXV9 100 aa8.75□□□□□ -1.01
TM9SF4-203ENST00000417389 PARP11Q9NR21 331 aa8.75□□□□□ -1.01
TM9SF4-203ENST00000417389 PLSCR3Q9NRY6 295 aa8.75□□□□□ -1.01
TM9SF4-203ENST00000417389 SLC35D1Q9NTN3 355 aa8.75□□□□□ -1.01
TM9SF4-203ENST00000417389 SDHAF2Q9NX18 166 aa8.75□□□□□ -1.01
TM9SF4-203ENST00000417389 TSSC4Q9Y5U2 329 aaPredicted RBP8.75□□□□□ -1.01
TM9SF4-203ENST00000417389 PKD1L1Q8TDX9 2849 aa8.74□□□□□ -1.01
TM9SF4-203ENST00000417389 LINC01548A6NM66 108 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms