RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 DPF1Q92782 380 aa10.15□□□□□ -0.78
LINC00339-202ENST00000416769 AKR1E2Q96JD6 320 aa10.15□□□□□ -0.78
LINC00339-202ENST00000416769 RAB9BQ9NP90 201 aa10.15□□□□□ -0.78
LINC00339-202ENST00000416769 KCNIP1Q9NZI2 227 aa10.15□□□□□ -0.78
LINC00339-202ENST00000416769 MOB4Q9Y3A3 225 aa10.15□□□□□ -0.78
LINC00339-202ENST00000416769 LSM4Q9Y4Z0 139 aaKnown RBP10.15□□□□□ -0.78
LINC00339-202ENST00000416769 V9GYH0 126 aa10.15□□□□□ -0.78
LINC00339-202ENST00000416769 BIRC6Q9NR09 4857 aa10.15□□□□□ -0.78
LINC00339-202ENST00000416769 TRAV39A0A0B4J263 110 aa10.14□□□□□ -0.79
LINC00339-202ENST00000416769 A0A1W2PPE3 182 aa10.14□□□□□ -0.79
LINC00339-202ENST00000416769 GABARAPH6UMI1 98 aa10.14□□□□□ -0.79
LINC00339-202ENST00000416769 GSTZ1O43708 216 aaPredicted RBP10.14□□□□□ -0.79
LINC00339-202ENST00000416769 RBBP9O75884 186 aa10.14□□□□□ -0.79
LINC00339-202ENST00000416769 FCGR3AP08637 254 aa10.14□□□□□ -0.79
LINC00339-202ENST00000416769 NAT1P18440 290 aa10.14□□□□□ -0.79
LINC00339-202ENST00000416769 RCC1P18754 421 aaPredicted RBP10.14□□□□□ -0.79
LINC00339-202ENST00000416769 CD34P28906 385 aa10.14□□□□□ -0.79
LINC00339-202ENST00000416769 SSBP1Q04837 148 aaKnown RBP10.14□□□□□ -0.79
LINC00339-202ENST00000416769 LTC4SQ16873 150 aa10.14□□□□□ -0.79
LINC00339-202ENST00000416769 FAM53AQ6NSI3 398 aaPredicted RBP10.14□□□□□ -0.79
LINC00339-202ENST00000416769 HOGA1Q86XE5 327 aa10.14□□□□□ -0.79
LINC00339-202ENST00000416769 C5orf56Q8N8D9 126 aa10.14□□□□□ -0.79
LINC00339-202ENST00000416769 OR10A7Q8NGE5 316 aa10.14□□□□□ -0.79
LINC00339-202ENST00000416769 SETD6Q8TBK2 473 aa10.14□□□□□ -0.79
LINC00339-202ENST00000416769 MRGPRDQ8TDS7 321 aa10.14□□□□□ -0.79
LINC00339-202ENST00000416769 KIRREL1Q96J84 757 aa10.14□□□□□ -0.79
LINC00339-202ENST00000416769 ST6GALNAC5Q9BVH7 336 aa10.14□□□□□ -0.79
LINC00339-202ENST00000416769 GAL3ST2Q9H3Q3 398 aa10.14□□□□□ -0.79
LINC00339-202ENST00000416769 LINC00574Q9H8X3 128 aa10.14□□□□□ -0.79
LINC00339-202ENST00000416769 AKIP1Q9NQ31 210 aa10.14□□□□□ -0.79
LINC00339-202ENST00000416769 KBTBD11-OT1A0A1B0GTJ5 212 aa10.13□□□□□ -0.79
LINC00339-202ENST00000416769 FAM90A9PA6NNJ1 464 aa10.13□□□□□ -0.79
LINC00339-202ENST00000416769 TRDCB7Z8K6 153 aa10.13□□□□□ -0.79
LINC00339-202ENST00000416769 NPIPB11E5RHQ5 1161 aa10.13□□□□□ -0.79
LINC00339-202ENST00000416769 C15orf65H3BRN8 121 aa10.13□□□□□ -0.79
LINC00339-202ENST00000416769 RPLP1P05386 114 aaKnown RBP10.13□□□□□ -0.79
LINC00339-202ENST00000416769 GLP1RP43220 463 aa10.13□□□□□ -0.79
LINC00339-202ENST00000416769 DGCR2P98153 550 aa10.13□□□□□ -0.79
LINC00339-202ENST00000416769 LSAMPQ13449 338 aa10.13□□□□□ -0.79
LINC00339-202ENST00000416769 KIR2DS1Q14954 304 aa10.13□□□□□ -0.79
LINC00339-202ENST00000416769 HMGN3Q15651 99 aa10.13□□□□□ -0.79
LINC00339-202ENST00000416769 ZNF79Q15937 498 aa10.13□□□□□ -0.79
LINC00339-202ENST00000416769 PYDC2Q56P42 97 aa10.13□□□□□ -0.79
LINC00339-202ENST00000416769 GDPD1Q8N9F7 314 aa10.13□□□□□ -0.79
LINC00339-202ENST00000416769 OR52I2Q8NH67 350 aa10.13□□□□□ -0.79
LINC00339-202ENST00000416769 ARL11Q969Q4 196 aa10.13□□□□□ -0.79
LINC00339-202ENST00000416769 SRRQ9GZT4 340 aa10.13□□□□□ -0.79
LINC00339-202ENST00000416769 TAF9BQ9HBM6 251 aa10.13□□□□□ -0.79
LINC00339-202ENST00000416769 MTFP1Q9UDX5 166 aa10.13□□□□□ -0.79
LINC00339-202ENST00000416769 ZNF230Q9UIE0 474 aaPredicted RBP10.13□□□□□ -0.79
LINC00339-202ENST00000416769 ANAPC10Q9UM13 185 aa10.13□□□□□ -0.79
LINC00339-202ENST00000416769 A0A087X0M5 115 aa10.12□□□□□ -0.79
LINC00339-202ENST00000416769 IGHV3-72A0A0B4J1Y9 119 aa10.12□□□□□ -0.79
LINC00339-202ENST00000416769 A0A1B0GX30 115 aa10.12□□□□□ -0.79
LINC00339-202ENST00000416769 C12orf77C9JDV5 145 aa10.12□□□□□ -0.79
LINC00339-202ENST00000416769 TOR1AO14656 332 aa10.12□□□□□ -0.79
LINC00339-202ENST00000416769 SPINT2O43291 252 aa10.12□□□□□ -0.79
LINC00339-202ENST00000416769 MYCNOSP40205 109 aa10.12□□□□□ -0.79
LINC00339-202ENST00000416769 GNG10P50151 68 aa10.12□□□□□ -0.79
LINC00339-202ENST00000416769 HLA-DRB3P79483 266 aa10.12□□□□□ -0.79
LINC00339-202ENST00000416769 MFSD4AQ8N468 514 aa10.12□□□□□ -0.79
LINC00339-202ENST00000416769 GVQW1Q8N7I0 195 aa10.12□□□□□ -0.79
LINC00339-202ENST00000416769 BEST4Q8NFU0 473 aa10.12□□□□□ -0.79
LINC00339-202ENST00000416769 OR52M1Q8NGK5 317 aa10.12□□□□□ -0.79
LINC00339-202ENST00000416769 SMIM4Q8WVI0 70 aa10.12□□□□□ -0.79
LINC00339-202ENST00000416769 TOMM40LQ969M1 308 aa10.12□□□□□ -0.79
LINC00339-202ENST00000416769 RPEQ96AT9 228 aa10.12□□□□□ -0.79
LINC00339-202ENST00000416769 THAP7Q9BT49 309 aaPredicted RBP10.12□□□□□ -0.79
LINC00339-202ENST00000416769 IFT46Q9NQC8 304 aa10.12□□□□□ -0.79
LINC00339-202ENST00000416769 CALYQ9NYX4 217 aa10.12□□□□□ -0.79
LINC00339-202ENST00000416769 IDI2-AS1Q9NZ38 188 aa10.12□□□□□ -0.79
LINC00339-202ENST00000416769 KLK11Q9UBX7 282 aa10.12□□□□□ -0.79
LINC00339-202ENST00000416769 SORL1Q92673 2214 aa10.12□□□□□ -0.79
LINC00339-202ENST00000416769 MEIS3P1A6NDR6 274 aa10.11□□□□□ -0.79
LINC00339-202ENST00000416769 CCL24O00175 119 aa10.11□□□□□ -0.79
LINC00339-202ENST00000416769 DIRAS3O95661 229 aa10.11□□□□□ -0.79
LINC00339-202ENST00000416769 IGKV1D-33P01593 117 aa10.11□□□□□ -0.79
LINC00339-202ENST00000416769 IGKV1-33P01594 117 aa10.11□□□□□ -0.79
LINC00339-202ENST00000416769 HBZP02008 142 aa10.11□□□□□ -0.79
LINC00339-202ENST00000416769 SCTP09683 121 aa10.11□□□□□ -0.79
LINC00339-202ENST00000416769 CTXN2P0C2S0 81 aa10.11□□□□□ -0.79
LINC00339-202ENST00000416769 GSTT2P0CG29 244 aa10.11□□□□□ -0.79
LINC00339-202ENST00000416769 GSTT2BP0CG30 244 aa10.11□□□□□ -0.79
LINC00339-202ENST00000416769 TMEM11P17152 192 aa10.11□□□□□ -0.79
LINC00339-202ENST00000416769 CD40LGP29965 261 aa10.11□□□□□ -0.79
LINC00339-202ENST00000416769 RCVRNP35243 200 aa10.11□□□□□ -0.79
LINC00339-202ENST00000416769 REG1BP48304 166 aa10.11□□□□□ -0.79
LINC00339-202ENST00000416769 PPP5CP53041 499 aa10.11□□□□□ -0.79
LINC00339-202ENST00000416769 ACTBP60709 375 aa10.11□□□□□ -0.79
LINC00339-202ENST00000416769 HTD2P86397 168 aa10.11□□□□□ -0.79
LINC00339-202ENST00000416769 HES1Q14469 280 aa10.11□□□□□ -0.79
LINC00339-202ENST00000416769 ZNF846Q147U1 533 aa10.11□□□□□ -0.79
LINC00339-202ENST00000416769 TMEM30BQ3MIR4 351 aa10.11□□□□□ -0.79
LINC00339-202ENST00000416769 OR52W1Q6IF63 320 aa10.11□□□□□ -0.79
LINC00339-202ENST00000416769 LYSMD2Q8IV50 215 aa10.11□□□□□ -0.79
LINC00339-202ENST00000416769 ZNF695Q8IW36 515 aa10.11□□□□□ -0.79
LINC00339-202ENST00000416769 Q8N402 240 aa10.11□□□□□ -0.79
LINC00339-202ENST00000416769 OR4A4PQ8NGN8 299 aa10.11□□□□□ -0.79
LINC00339-202ENST00000416769 RFESDQ8TAC1 157 aa10.11□□□□□ -0.79
LINC00339-202ENST00000416769 MAFIPQ8WZ33 124 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms