RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 MXD1Q05195 221 aa20.61■□□□□ 0.89
VEGFA-207ENST00000413642 ARFRP1Q13795 201 aa20.61■□□□□ 0.89
VEGFA-207ENST00000413642 KCTD21Q4G0X4 260 aa20.61■□□□□ 0.89
VEGFA-207ENST00000413642 LIN54Q6MZP7 749 aa20.61■□□□□ 0.89
VEGFA-207ENST00000413642 TPRA1Q86W33 373 aa20.61■□□□□ 0.89
VEGFA-207ENST00000413642 ZNF695Q8IW36 515 aa20.61■□□□□ 0.89
VEGFA-207ENST00000413642 ZNF383Q8NA42 475 aa20.61■□□□□ 0.89
VEGFA-207ENST00000413642 OR5AN1Q8NGI8 311 aa20.61■□□□□ 0.89
VEGFA-207ENST00000413642 GON7Q9BXV9 100 aa20.61■□□□□ 0.89
VEGFA-207ENST00000413642 OR51J1Q9H342 316 aa20.61■□□□□ 0.89
VEGFA-207ENST00000413642 NOTCH3Q9UM47 2321 aa20.61■□□□□ 0.89
VEGFA-207ENST00000413642 LOC100506127A0A0U1RQW1 187 aa20.6■□□□□ 0.89
VEGFA-207ENST00000413642 H7C2Y5 167 aa20.6■□□□□ 0.89
VEGFA-207ENST00000413642 ATP6V0E1O15342 81 aa20.6■□□□□ 0.89
VEGFA-207ENST00000413642 NDUFA3O95167 84 aa20.6■□□□□ 0.89
VEGFA-207ENST00000413642 HLA-DRB1P01911 266 aa20.6■□□□□ 0.89
VEGFA-207ENST00000413642 CABLES2Q9BTV7 478 aa20.6■□□□□ 0.89
VEGFA-207ENST00000413642 PARP11Q9NR21 331 aa20.6■□□□□ 0.89
VEGFA-207ENST00000413642 ZNF221Q9UK13 617 aa20.6■□□□□ 0.89
VEGFA-207ENST00000413642 OR5H14A6NHG9 310 aa20.59■□□□□ 0.89
VEGFA-207ENST00000413642 FCN1O00602 326 aa20.59■□□□□ 0.89
VEGFA-207ENST00000413642 CD36P16671 472 aa20.59■□□□□ 0.89
VEGFA-207ENST00000413642 FOXE3Q13461 319 aa20.59■□□□□ 0.89
VEGFA-207ENST00000413642 KIR2DS1Q14954 304 aa20.59■□□□□ 0.89
VEGFA-207ENST00000413642 CDNFQ49AH0 187 aa20.59■□□□□ 0.89
VEGFA-207ENST00000413642 CXorf66Q5JRM2 361 aaPredicted RBP20.59■□□□□ 0.89
VEGFA-207ENST00000413642 SFXN4Q6P4A7 337 aa20.59■□□□□ 0.89
VEGFA-207ENST00000413642 LGALS14Q8TCE9 139 aa20.59■□□□□ 0.89
VEGFA-207ENST00000413642 CENPOQ9BU64 300 aa20.59■□□□□ 0.89
VEGFA-207ENST00000413642 TOLLIPQ9H0E2 274 aa20.59■□□□□ 0.89
VEGFA-207ENST00000413642 GHITMQ9H3K2 345 aa20.59■□□□□ 0.89
VEGFA-207ENST00000413642 NECAP2Q9NVZ3 263 aa20.59■□□□□ 0.89
VEGFA-207ENST00000413642 KIAA1456Q9P272 454 aa20.59■□□□□ 0.89
VEGFA-207ENST00000413642 WASHC3Q9Y3C0 194 aa20.59■□□□□ 0.89
VEGFA-207ENST00000413642 TRBV6-7A0A0A0MS04 114 aa20.58■□□□□ 0.89
VEGFA-207ENST00000413642 IGHG4P01861 327 aa20.58■□□□□ 0.89
VEGFA-207ENST00000413642 ELANEP08246 267 aa20.58■□□□□ 0.89
VEGFA-207ENST00000413642 GSTP1P09211 210 aaKnown RBP20.58■□□□□ 0.89
VEGFA-207ENST00000413642 OR8U9P0C7N5 309 aa20.58■□□□□ 0.89
VEGFA-207ENST00000413642 MC5RP33032 325 aa20.58■□□□□ 0.89
VEGFA-207ENST00000413642 SERPINB10P48595 397 aa20.58■□□□□ 0.89
VEGFA-207ENST00000413642 NDPQ00604 133 aa20.58■□□□□ 0.89
VEGFA-207ENST00000413642 DEFB136Q30KP8 78 aa20.58■□□□□ 0.89
VEGFA-207ENST00000413642 RNF152Q8N8N0 203 aa20.58■□□□□ 0.89
VEGFA-207ENST00000413642 OR8U1Q8NH10 309 aa20.58■□□□□ 0.89
VEGFA-207ENST00000413642 C5orf30Q96GV9 206 aa20.58■□□□□ 0.89
VEGFA-207ENST00000413642 RAX2Q96IS3 184 aa20.58■□□□□ 0.89
VEGFA-207ENST00000413642 P2RX4Q99571 388 aa20.58■□□□□ 0.89
VEGFA-207ENST00000413642 AURKAIP1Q9NWT8 199 aaPredicted RBP20.58■□□□□ 0.89
VEGFA-207ENST00000413642 FBXO7Q9Y3I1 522 aa20.58■□□□□ 0.89
VEGFA-207ENST00000413642 M0R1X1 148 aa20.57■□□□□ 0.88
VEGFA-207ENST00000413642 RRHO14718 337 aa20.57■□□□□ 0.88
VEGFA-207ENST00000413642 PPIFP30405 207 aaKnown RBP20.57■□□□□ 0.88
VEGFA-207ENST00000413642 TALDO1P37837 337 aa20.57■□□□□ 0.88
VEGFA-207ENST00000413642 MYCNOSP40205 109 aa20.57■□□□□ 0.88
VEGFA-207ENST00000413642 OR5H6Q8NGV6 325 aa20.57■□□□□ 0.88
VEGFA-207ENST00000413642 OR10J5Q8NHC4 309 aa20.57■□□□□ 0.88
VEGFA-207ENST00000413642 RCC1LQ96I51 464 aaKnown RBP20.57■□□□□ 0.88
VEGFA-207ENST00000413642 KLK15Q9H2R5 256 aa20.57■□□□□ 0.88
VEGFA-207ENST00000413642 ZNF580Q9UK33 172 aa20.57■□□□□ 0.88
VEGFA-207ENST00000413642 IGKV1-16P04430 117 aa20.56■□□□□ 0.88
VEGFA-207ENST00000413642 TFAP2AP05549 437 aa20.56■□□□□ 0.88
VEGFA-207ENST00000413642 CLCC1Q96S66 551 aa20.56■□□□□ 0.88
VEGFA-207ENST00000413642 OR2D2Q9H210 308 aa20.56■□□□□ 0.88
VEGFA-207ENST00000413642 PRKDCP78527 4128 aaKnown RBP20.56■□□□□ 0.88
VEGFA-207ENST00000413642 PSMB8P28062 276 aa20.55■□□□□ 0.88
VEGFA-207ENST00000413642 CX3CL1P78423 397 aa20.55■□□□□ 0.88
VEGFA-207ENST00000413642 PSG5Q15238 335 aa20.55■□□□□ 0.88
VEGFA-207ENST00000413642 NUDCD2Q8WVJ2 157 aa20.55■□□□□ 0.88
VEGFA-207ENST00000413642 ST6GALNAC5Q9BVH7 336 aa20.55■□□□□ 0.88
VEGFA-207ENST00000413642 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.55■□□□□ 0.889e-6■□□□□ 9.4
VEGFA-207ENST00000413642 SDHAF2Q9NX18 166 aa20.55■□□□□ 0.88
VEGFA-207ENST00000413642 GAB2Q9UQC2 676 aa20.55■□□□□ 0.88
VEGFA-207ENST00000413642 TRAV41A0A0B4J266 112 aa20.54■□□□□ 0.88
VEGFA-207ENST00000413642 CCL24O00175 119 aa20.54■□□□□ 0.88
VEGFA-207ENST00000413642 HOXD3P31249 432 aaPredicted RBP20.54■□□□□ 0.88
VEGFA-207ENST00000413642 TGFBR1P36897 503 aa20.54■□□□□ 0.88
VEGFA-207ENST00000413642 CDX1P47902 265 aaPredicted RBP20.54■□□□□ 0.88
VEGFA-207ENST00000413642 KRTAP10-11P60412 298 aa20.54■□□□□ 0.88
VEGFA-207ENST00000413642 PLGLAQ15195 96 aa20.54■□□□□ 0.88
VEGFA-207ENST00000413642 IDNKQ5T6J7 187 aa20.54■□□□□ 0.88
VEGFA-207ENST00000413642 TMEM235A6NFC5 223 aa20.53■□□□□ 0.88
VEGFA-207ENST00000413642 RBBP9O75884 186 aa20.53■□□□□ 0.88
VEGFA-207ENST00000413642 OR5H8P0DN80 308 aa20.53■□□□□ 0.88
VEGFA-207ENST00000413642 EGR2P11161 476 aaPredicted RBP20.53■□□□□ 0.88
VEGFA-207ENST00000413642 SLC6A1P30531 599 aa20.53■□□□□ 0.88
VEGFA-207ENST00000413642 RPS16P62249 146 aaKnown RBP20.53■□□□□ 0.88
VEGFA-207ENST00000413642 KIAA0141Q14154 515 aaPredicted RBP20.53■□□□□ 0.88
VEGFA-207ENST00000413642 ECSCRQ19T08 205 aa20.53■□□□□ 0.88
VEGFA-207ENST00000413642 HACD4Q5VWC8 232 aa20.53■□□□□ 0.88
VEGFA-207ENST00000413642 GINS4Q9BRT9 223 aa20.53■□□□□ 0.88
VEGFA-207ENST00000413642 RHBDL2Q9NX52 303 aa20.53■□□□□ 0.88
VEGFA-207ENST00000413642 METTL1Q9UBP6 276 aaKnown RBP20.53■□□□□ 0.88
VEGFA-207ENST00000413642 A3GALT2U3KPV4 340 aa20.53■□□□□ 0.88
VEGFA-207ENST00000413642 J3QRK9 145 aa20.52■□□□□ 0.88
VEGFA-207ENST00000413642 SSX5O60225 188 aa20.52■□□□□ 0.88
VEGFA-207ENST00000413642 RAB25P57735 213 aa20.52■□□□□ 0.88
VEGFA-207ENST00000413642 SRSF7Q16629 238 aaKnown RBP eCLIP20.52■□□□□ 0.887e-11■□□□□ 10.2
VEGFA-207ENST00000413642 ZNF260Q3ZCT1 412 aa20.52■□□□□ 0.88
VEGFA-207ENST00000413642 Q6ZS49 121 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms