RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 ATG5Q9H1Y0 275 aa14.92□□□□□ -0.02
SF3A1-202ENST00000411423 DAPK2Q9UIK4 370 aa14.92□□□□□ -0.02
SF3A1-202ENST00000411423 SSR3Q9UNL2 185 aa14.92□□□□□ -0.02
SF3A1-202ENST00000411423 FCN1O00602 326 aa14.91□□□□□ -0.02
SF3A1-202ENST00000411423 HLA-DRB1P01911 266 aa14.91□□□□□ -0.02
SF3A1-202ENST00000411423 PPIFP30405 207 aaKnown RBP14.91□□□□□ -0.02
SF3A1-202ENST00000411423 TGFBR1P36897 503 aa14.91□□□□□ -0.02
SF3A1-202ENST00000411423 MXD1Q05195 221 aa14.91□□□□□ -0.02
SF3A1-202ENST00000411423 SFXN4Q6P4A7 337 aa14.91□□□□□ -0.02
SF3A1-202ENST00000411423 TEX38Q6PEX7 206 aa14.91□□□□□ -0.02
SF3A1-202ENST00000411423 COMMD1Q8N668 190 aa14.91□□□□□ -0.02
SF3A1-202ENST00000411423 RNF152Q8N8N0 203 aa14.91□□□□□ -0.02
SF3A1-202ENST00000411423 LGALS14Q8TCE9 139 aa14.91□□□□□ -0.02
SF3A1-202ENST00000411423 EDARADDQ8WWZ3 215 aa14.91□□□□□ -0.02
SF3A1-202ENST00000411423 FBXL15Q9H469 300 aa14.91□□□□□ -0.02
SF3A1-202ENST00000411423 ZFP57Q9NU63 452 aa14.91□□□□□ -0.02
SF3A1-202ENST00000411423 WSB1Q9Y6I7 421 aa14.91□□□□□ -0.02
SF3A1-202ENST00000411423 TRBV6-7A0A0A0MS04 114 aa14.9□□□□□ -0.02
SF3A1-202ENST00000411423 BET1O15155 118 aa14.9□□□□□ -0.02
SF3A1-202ENST00000411423 IGHG4P01861 327 aa14.9□□□□□ -0.02
SF3A1-202ENST00000411423 CD36P16671 472 aa14.9□□□□□ -0.02
SF3A1-202ENST00000411423 RANBP1P43487 201 aa14.9□□□□□ -0.02
SF3A1-202ENST00000411423 FOXE3Q13461 319 aa14.9□□□□□ -0.02
SF3A1-202ENST00000411423 DEFB136Q30KP8 78 aa14.9□□□□□ -0.02
SF3A1-202ENST00000411423 TPRA1Q86W33 373 aa14.9□□□□□ -0.02
SF3A1-202ENST00000411423 OR5H6Q8NGV6 325 aa14.9□□□□□ -0.02
SF3A1-202ENST00000411423 RAX2Q96IS3 184 aa14.9□□□□□ -0.02
SF3A1-202ENST00000411423 P2RX4Q99571 388 aa14.9□□□□□ -0.02
SF3A1-202ENST00000411423 OR51J1Q9H342 316 aa14.9□□□□□ -0.02
SF3A1-202ENST00000411423 AURKAIP1Q9NWT8 199 aaPredicted RBP14.9□□□□□ -0.02
SF3A1-202ENST00000411423 ZNF580Q9UK33 172 aa14.9□□□□□ -0.02
SF3A1-202ENST00000411423 LOC100506127A0A0U1RQW1 187 aa14.89□□□□□ -0.03
SF3A1-202ENST00000411423 OR5H14A6NHG9 310 aa14.89□□□□□ -0.03
SF3A1-202ENST00000411423 IGKV1-16P04430 117 aa14.89□□□□□ -0.03
SF3A1-202ENST00000411423 PSMB8P28062 276 aa14.89□□□□□ -0.03
SF3A1-202ENST00000411423 KIAA0141Q14154 515 aaPredicted RBP14.89□□□□□ -0.03
SF3A1-202ENST00000411423 CDNFQ49AH0 187 aa14.89□□□□□ -0.03
SF3A1-202ENST00000411423 ZNF695Q8IW36 515 aa14.89□□□□□ -0.03
SF3A1-202ENST00000411423 KLK15Q9H2R5 256 aa14.89□□□□□ -0.03
SF3A1-202ENST00000411423 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.89□□□□□ -0.03
SF3A1-202ENST00000411423 PARP11Q9NR21 331 aa14.89□□□□□ -0.03
SF3A1-202ENST00000411423 GAB2Q9UQC2 676 aa14.89□□□□□ -0.03
SF3A1-202ENST00000411423 WASHC3Q9Y3C0 194 aa14.89□□□□□ -0.03
SF3A1-202ENST00000411423 METTL21EPA6NDL7 271 aa14.88□□□□□ -0.03
SF3A1-202ENST00000411423 NUDT19A8MXV4 375 aa14.88□□□□□ -0.03
SF3A1-202ENST00000411423 RRHO14718 337 aa14.88□□□□□ -0.03
SF3A1-202ENST00000411423 RRP9O43818 475 aaKnown RBP14.88□□□□□ -0.03
SF3A1-202ENST00000411423 ELANEP08246 267 aa14.88□□□□□ -0.03
SF3A1-202ENST00000411423 OR8U9P0C7N5 309 aa14.88□□□□□ -0.03
SF3A1-202ENST00000411423 EGR2P11161 476 aaPredicted RBP14.88□□□□□ -0.03
SF3A1-202ENST00000411423 VDAC1P21796 283 aa14.88□□□□□ -0.03
SF3A1-202ENST00000411423 KRTAP10-11P60412 298 aa14.88□□□□□ -0.03
SF3A1-202ENST00000411423 MRPS15P82914 257 aaKnown RBP14.88□□□□□ -0.03
SF3A1-202ENST00000411423 ARFRP1Q13795 201 aa14.88□□□□□ -0.03
SF3A1-202ENST00000411423 C19orf54Q5BKX5 351 aa14.88□□□□□ -0.03
SF3A1-202ENST00000411423 LIN54Q6MZP7 749 aa14.88□□□□□ -0.03
SF3A1-202ENST00000411423 OR8U1Q8NH10 309 aa14.88□□□□□ -0.03
SF3A1-202ENST00000411423 MYOZ3Q8TDC0 251 aa14.88□□□□□ -0.03
SF3A1-202ENST00000411423 SLC25A38Q96DW6 304 aa14.88□□□□□ -0.03
SF3A1-202ENST00000411423 GHITMQ9H3K2 345 aa14.88□□□□□ -0.03
SF3A1-202ENST00000411423 TPSG1Q9NRR2 321 aa14.88□□□□□ -0.03
SF3A1-202ENST00000411423 NECAP2Q9NVZ3 263 aa14.88□□□□□ -0.03
SF3A1-202ENST00000411423 SDHAF2Q9NX18 166 aa14.88□□□□□ -0.03
SF3A1-202ENST00000411423 TMEM235A6NFC5 223 aa14.87□□□□□ -0.03
SF3A1-202ENST00000411423 H7C2Y5 167 aa14.87□□□□□ -0.03
SF3A1-202ENST00000411423 M0R1X1 148 aa14.87□□□□□ -0.03
SF3A1-202ENST00000411423 SSX5O60225 188 aa14.87□□□□□ -0.03
SF3A1-202ENST00000411423 MYCNOSP40205 109 aa14.87□□□□□ -0.03
SF3A1-202ENST00000411423 KIR2DS1Q14954 304 aa14.87□□□□□ -0.03
SF3A1-202ENST00000411423 PSG5Q15238 335 aa14.87□□□□□ -0.03
SF3A1-202ENST00000411423 ZNF260Q3ZCT1 412 aa14.87□□□□□ -0.03
SF3A1-202ENST00000411423 CXorf66Q5JRM2 361 aaPredicted RBP14.87□□□□□ -0.03
SF3A1-202ENST00000411423 Q6ZS49 121 aa14.87□□□□□ -0.03
SF3A1-202ENST00000411423 NUDCD2Q8WVJ2 157 aa14.87□□□□□ -0.03
SF3A1-202ENST00000411423 GON7Q9BXV9 100 aa14.87□□□□□ -0.03
SF3A1-202ENST00000411423 OR2D2Q9H210 308 aa14.87□□□□□ -0.03
SF3A1-202ENST00000411423 ZNF221Q9UK13 617 aa14.87□□□□□ -0.03
SF3A1-202ENST00000411423 SOX15O60248 233 aa14.86□□□□□ -0.03
SF3A1-202ENST00000411423 IGLV1-40P01703 118 aa14.86□□□□□ -0.03
SF3A1-202ENST00000411423 TFAP2AP05549 437 aa14.86□□□□□ -0.03
SF3A1-202ENST00000411423 MC5RP33032 325 aa14.86□□□□□ -0.03
SF3A1-202ENST00000411423 CDX1P47902 265 aaPredicted RBP14.86□□□□□ -0.03
SF3A1-202ENST00000411423 SERPINB10P48595 397 aa14.86□□□□□ -0.03
SF3A1-202ENST00000411423 CX3CL1P78423 397 aa14.86□□□□□ -0.03
SF3A1-202ENST00000411423 SRSF7Q16629 238 aaKnown RBP eCLIP14.86□□□□□ -0.03
SF3A1-202ENST00000411423 HACD4Q5VWC8 232 aa14.86□□□□□ -0.03
SF3A1-202ENST00000411423 H1FOOQ8IZA3 346 aaPredicted RBP14.86□□□□□ -0.03
SF3A1-202ENST00000411423 OR10J5Q8NHC4 309 aa14.86□□□□□ -0.03
SF3A1-202ENST00000411423 RCC1LQ96I51 464 aaKnown RBP14.86□□□□□ -0.03
SF3A1-202ENST00000411423 CLCC1Q96S66 551 aa14.86□□□□□ -0.03
SF3A1-202ENST00000411423 KIAA1456Q9P272 454 aa14.86□□□□□ -0.03
SF3A1-202ENST00000411423 TRAV41A0A0B4J266 112 aa14.85□□□□□ -0.03
SF3A1-202ENST00000411423 CCL24O00175 119 aa14.85□□□□□ -0.03
SF3A1-202ENST00000411423 GSTP1P09211 210 aaKnown RBP14.85□□□□□ -0.03
SF3A1-202ENST00000411423 DTYMKP23919 212 aa14.85□□□□□ -0.03
SF3A1-202ENST00000411423 HOXD3P31249 432 aaPredicted RBP14.85□□□□□ -0.03
SF3A1-202ENST00000411423 CRIP2P52943 208 aaPredicted RBP14.85□□□□□ -0.03
SF3A1-202ENST00000411423 SSBP2P81877 361 aaPredicted RBP14.85□□□□□ -0.03
SF3A1-202ENST00000411423 MINDY2Q8NBR6 621 aa14.85□□□□□ -0.03
SF3A1-202ENST00000411423 YIPF6Q96EC8 236 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms