RNA–Protein interactions for RNA: ENST00000409855.5

SCN7A-201, Transcript of sodium voltage-gated channel alpha subunit 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN7A, Length 7,183 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7A-201ENST00000409855 RFLNAQ6ZTI6 216 aa1.8□□□□□ -2.12
SCN7A-201ENST00000409855 NKAIN4Q8IVV8 208 aa1.8□□□□□ -2.12
SCN7A-201ENST00000409855 OR2G2Q8NGZ5 317 aa1.8□□□□□ -2.12
SCN7A-201ENST00000409855 DTD1Q8TEA8 209 aa1.8□□□□□ -2.12
SCN7A-201ENST00000409855 C18orf12Q96KH6 178 aa1.8□□□□□ -2.12
SCN7A-201ENST00000409855 LINC00052Q96N35 136 aa1.8□□□□□ -2.12
SCN7A-201ENST00000409855 FOXN4Q96NZ1 517 aa1.8□□□□□ -2.12
SCN7A-201ENST00000409855 TM2D2Q9BX73 214 aa1.8□□□□□ -2.12
SCN7A-201ENST00000409855 RNF167Q9H6Y7 350 aa1.8□□□□□ -2.12
SCN7A-201ENST00000409855 TAS2R5Q9NYW4 299 aa1.8□□□□□ -2.12
SCN7A-201ENST00000409855 CHD7Q9P2D1 2997 aa1.8□□□□□ -2.12
SCN7A-201ENST00000409855 TSSC4Q9Y5U2 329 aaPredicted RBP1.8□□□□□ -2.12
SCN7A-201ENST00000409855 TRBV7-1A0A0A6YYK4 115 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 TRAV41A0A0B4J266 112 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 TEX50A0A1B0GTY4 177 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 C1QTNF9BB2RNN3 333 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 GATCO43716 136 aaKnown RBP1.79□□□□□ -2.12
SCN7A-201ENST00000409855 IGHV3-13P01766 116 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 GYPAP02724 150 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 CELA2BP08218 269 aaPredicted RBP1.79□□□□□ -2.12
SCN7A-201ENST00000409855 GIPP09681 153 aaPredicted RBP1.79□□□□□ -2.12
SCN7A-201ENST00000409855 C1QTNF9P0C862 333 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 RPL35P42766 123 aaKnown RBP1.79□□□□□ -2.12
SCN7A-201ENST00000409855 CDX1P47902 265 aaPredicted RBP1.79□□□□□ -2.12
SCN7A-201ENST00000409855 ERFP50548 548 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 RBM11P57052 281 aaKnown RBP1.79□□□□□ -2.12
SCN7A-201ENST00000409855 FAM3AP98173 230 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 EGR4Q05215 589 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 MESP2Q0VG99 397 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 FXYD3Q14802 87 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 VAMP3Q15836 100 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 NSUN5P1Q3KNT7 163 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 Q6AWC8 147 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 SLC51BQ86UW2 128 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 OR52I1Q8NGK6 324 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 OR52I2Q8NH67 350 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 LGALS14Q8TCE9 139 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 KLF14Q8TD94 323 aaPredicted RBP1.79□□□□□ -2.12
SCN7A-201ENST00000409855 RNASEH2CQ8TDP1 164 aaKnown RBP1.79□□□□□ -2.12
SCN7A-201ENST00000409855 C17orf50Q8WW18 174 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 C7orf34Q96L11 122 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 MUS81Q96NY9 551 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 UCN2Q96RP3 112 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 SEC11CQ9BY50 192 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 REG4Q9BYZ8 158 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 TUBB1Q9H4B7 451 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 PRSS50Q9UI38 385 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 OTOGLQ3ZCN5 2332 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 ZAR1LA6NP61 321 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 OR11H12B2RN74 326 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 TSTD3H0UI37 97 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 H3BSH0 61 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 RBFOX2O43251 390 aaKnown RBP eCLIP1.79□□□□□ -2.12
SCN7A-201ENST00000409855 CD5LO43866 347 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 CDK2AP2O75956 126 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 PEX11BO96011 259 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 H2AFB1P0C5Y9 115 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 PTNP21246 168 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 AQP4P55087 323 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 CLDN18P56856 261 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 CEBPEQ15744 281 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 LINC01559Q495D7 138 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 TTC32Q5I0X7 151 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 TBPL2Q6SJ96 375 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 TEPPQ6URK8 271 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 ZNF841Q6ZN19 808 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 RNF152Q8N8N0 203 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 MDS2Q8NDY4 140 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 OR8A1Q8NGG7 326 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 CNIH3Q8TBE1 160 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 OR5P3Q8WZ94 311 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 FAM131CQ96AQ9 280 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 PHOX2BQ99453 314 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 QTRT1Q9BXR0 403 aaKnown RBP1.79□□□□□ -2.12
SCN7A-201ENST00000409855 ZDHHC11Q9H8X9 412 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 AKIP1Q9NQ31 210 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 IL20Q9NYY1 176 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 WNK3Q9BYP7 1800 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 RBMY1BA6NDE4 496 aaKnown RBP1.79□□□□□ -2.12
SCN7A-201ENST00000409855 RBMY1EA6NEQ0 496 aaKnown RBP1.79□□□□□ -2.12
SCN7A-201ENST00000409855 H0Y8G0 127 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 CDIPTO14735 213 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 FGF16O43320 207 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 XRCC3O43542 346 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 PDE6DO43924 150 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 RBMY1DP0C7P1 496 aaKnown RBP1.79□□□□□ -2.12
SCN7A-201ENST00000409855 RBMY1A1P0DJD3 496 aaKnown RBP1.79□□□□□ -2.12
SCN7A-201ENST00000409855 RBMY1CP0DJD4 496 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 MAGEB1P43366 347 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 NDUFA6P56556 154 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 SEC11AP67812 179 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 UBE2L3P68036 154 aaKnown RBP1.79□□□□□ -2.12
SCN7A-201ENST00000409855 HOXC5Q00444 222 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 JOSD1Q15040 202 aaPredicted RBP1.79□□□□□ -2.12
SCN7A-201ENST00000409855 SLC9A3R2Q15599 337 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 CTF1Q16619 201 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 C12orf73Q69YU5 71 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 FAM159AQ6UWV7 190 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 B3GNT8Q7Z7M8 397 aa1.79□□□□□ -2.12
SCN7A-201ENST00000409855 LRRC75AQ8NAA5 344 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms