RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 IGKV1D-33P01593 117 aa12.77□□□□□ -0.36
LYSMD4-204ENST00000409796 IGKV1-33P01594 117 aa12.77□□□□□ -0.36
LYSMD4-204ENST00000409796 CEBPDP49716 269 aaPredicted RBP12.77□□□□□ -0.36
LYSMD4-204ENST00000409796 ERVS71-1P61550 626 aa12.77□□□□□ -0.36
LYSMD4-204ENST00000409796 FBXW9Q5XUX1 488 aa12.77□□□□□ -0.36
LYSMD4-204ENST00000409796 NANOS1Q8WY41 292 aaKnown RBP12.77□□□□□ -0.36
LYSMD4-204ENST00000409796 PARD6GQ9BYG4 376 aaPredicted RBP12.77□□□□□ -0.36
LYSMD4-204ENST00000409796 OR2J1Q9GZK6 312 aa12.77□□□□□ -0.36
LYSMD4-204ENST00000409796 RBKSQ9H477 322 aa12.77□□□□□ -0.36
LYSMD4-204ENST00000409796 PPP1R14DQ9NXH3 145 aa12.77□□□□□ -0.36
LYSMD4-204ENST00000409796 USF3Q68DE3 2245 aa12.77□□□□□ -0.36
LYSMD4-204ENST00000409796 CLDN1O95832 211 aa12.77□□□□□ -0.37
LYSMD4-204ENST00000409796 SP1P08047 785 aa12.77□□□□□ -0.37
LYSMD4-204ENST00000409796 PGA5P0DJD9 388 aa12.77□□□□□ -0.37
LYSMD4-204ENST00000409796 C4orf17Q53FE4 359 aa12.77□□□□□ -0.37
LYSMD4-204ENST00000409796 FAM53AQ6NSI3 398 aaPredicted RBP12.77□□□□□ -0.37
LYSMD4-204ENST00000409796 TMEM14EPQ6UXP3 125 aa12.77□□□□□ -0.37
LYSMD4-204ENST00000409796 Q8IYB0 196 aa12.77□□□□□ -0.37
LYSMD4-204ENST00000409796 ZNF664Q8N3J9 261 aa12.77□□□□□ -0.37
LYSMD4-204ENST00000409796 PINX1Q96BK5 328 aaKnown RBP12.77□□□□□ -0.37
LYSMD4-204ENST00000409796 ATG101Q9BSB4 218 aa12.77□□□□□ -0.37
LYSMD4-204ENST00000409796 NDUFAF3Q9BU61 184 aa12.77□□□□□ -0.37
LYSMD4-204ENST00000409796 POLDIP2Q9Y2S7 368 aa12.77□□□□□ -0.37
LYSMD4-204ENST00000409796 FRYQ5TBA9 3013 aa12.77□□□□□ -0.37
LYSMD4-204ENST00000409796 WDFY4Q6ZS81 3184 aa12.76□□□□□ -0.37
LYSMD4-204ENST00000409796 ZNF737O75373 536 aa12.76□□□□□ -0.37
LYSMD4-204ENST00000409796 SELEP16581 610 aa12.76□□□□□ -0.37
LYSMD4-204ENST00000409796 TBC1D28Q2M2D7 210 aa12.76□□□□□ -0.37
LYSMD4-204ENST00000409796 WDR25Q64LD2 544 aaPredicted RBP12.76□□□□□ -0.37
LYSMD4-204ENST00000409796 C1orf210Q8IVY1 113 aa12.76□□□□□ -0.37
LYSMD4-204ENST00000409796 DEFB127Q9H1M4 99 aa12.76□□□□□ -0.37
LYSMD4-204ENST00000409796 SMCO3A2RU48 225 aa12.76□□□□□ -0.37
LYSMD4-204ENST00000409796 SH2D1BO14796 132 aa12.76□□□□□ -0.37
LYSMD4-204ENST00000409796 RAMP3O60896 148 aa12.76□□□□□ -0.37
LYSMD4-204ENST00000409796 SMPD2O60906 423 aa12.76□□□□□ -0.37
LYSMD4-204ENST00000409796 IFNA1P01562 189 aa12.76□□□□□ -0.37
LYSMD4-204ENST00000409796 TNFRSF9Q07011 255 aa12.76□□□□□ -0.37
LYSMD4-204ENST00000409796 ZNF146Q15072 292 aa12.76□□□□□ -0.37
LYSMD4-204ENST00000409796 RPP25LQ8N5L8 163 aaKnown RBP12.76□□□□□ -0.37
LYSMD4-204ENST00000409796 OR1L1Q8NH94 360 aa12.76□□□□□ -0.37
LYSMD4-204ENST00000409796 LHX4Q969G2 390 aa12.76□□□□□ -0.37
LYSMD4-204ENST00000409796 C5orf30Q96GV9 206 aa12.76□□□□□ -0.37
LYSMD4-204ENST00000409796 SLC39A9Q9NUM3 307 aa12.76□□□□□ -0.37
LYSMD4-204ENST00000409796 URB1O60287 2271 aaKnown RBP12.76□□□□□ -0.37
LYSMD4-204ENST00000409796 CACNA1DQ01668 2161 aa12.75□□□□□ -0.37
LYSMD4-204ENST00000409796 FAM90A26D6RGX4 464 aa12.75□□□□□ -0.37
LYSMD4-204ENST00000409796 GRPP07492 148 aa12.75□□□□□ -0.37
LYSMD4-204ENST00000409796 CD55P08174 381 aa12.75□□□□□ -0.37
LYSMD4-204ENST00000409796 GZMBP10144 247 aa12.75□□□□□ -0.37
LYSMD4-204ENST00000409796 MDKP21741 143 aaPredicted RBP12.75□□□□□ -0.37
LYSMD4-204ENST00000409796 PPP1CBP62140 327 aa12.75□□□□□ -0.37
LYSMD4-204ENST00000409796 TLE1Q04724 770 aa12.75□□□□□ -0.37
LYSMD4-204ENST00000409796 WDYHV1Q96HA8 205 aa12.75□□□□□ -0.37
LYSMD4-204ENST00000409796 GPR87Q9BY21 358 aa12.75□□□□□ -0.37
LYSMD4-204ENST00000409796 RNF212BA8MTL3 300 aa12.75□□□□□ -0.37
LYSMD4-204ENST00000409796 HMGB3O15347 200 aaKnown RBP12.75□□□□□ -0.37
LYSMD4-204ENST00000409796 G0S2P27469 103 aa12.75□□□□□ -0.37
LYSMD4-204ENST00000409796 G6PCP35575 357 aa12.75□□□□□ -0.37
LYSMD4-204ENST00000409796 RPL30P62888 115 aaKnown RBP12.75□□□□□ -0.37
LYSMD4-204ENST00000409796 SLC10A1Q14973 349 aa12.75□□□□□ -0.37
LYSMD4-204ENST00000409796 JOSD1Q15040 202 aaPredicted RBP12.75□□□□□ -0.37
LYSMD4-204ENST00000409796 ACSM6Q6P461 480 aa12.75□□□□□ -0.37
LYSMD4-204ENST00000409796 RAB24Q969Q5 203 aa12.75□□□□□ -0.37
LYSMD4-204ENST00000409796 KNTC1P50748 2209 aa12.75□□□□□ -0.37
LYSMD4-204ENST00000409796 C19orf67A6NJJ6 358 aa12.75□□□□□ -0.37
LYSMD4-204ENST00000409796 PSPNO60542 156 aa12.75□□□□□ -0.37
LYSMD4-204ENST00000409796 KRASP01116 189 aa12.75□□□□□ -0.37
LYSMD4-204ENST00000409796 OR3A1P47881 315 aa12.75□□□□□ -0.37
LYSMD4-204ENST00000409796 ZNF816Q0VGE8 651 aaPredicted RBP12.75□□□□□ -0.37
LYSMD4-204ENST00000409796 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.75□□□□□ -0.37
LYSMD4-204ENST00000409796 ZNF808Q8N4W9 903 aaPredicted RBP12.75□□□□□ -0.37
LYSMD4-204ENST00000409796 MDS2Q8NDY4 140 aa12.75□□□□□ -0.37
LYSMD4-204ENST00000409796 SNX22Q96L94 193 aa12.75□□□□□ -0.37
LYSMD4-204ENST00000409796 IL17BQ9UHF5 180 aa12.75□□□□□ -0.37
LYSMD4-204ENST00000409796 KLF13Q9Y2Y9 288 aaPredicted RBP12.75□□□□□ -0.37
LYSMD4-204ENST00000409796 TRBV24-1A0A075B6N3 115 aa12.74□□□□□ -0.37
LYSMD4-204ENST00000409796 HAND1O96004 215 aa12.74□□□□□ -0.37
LYSMD4-204ENST00000409796 FGF7P21781 194 aa12.74□□□□□ -0.37
LYSMD4-204ENST00000409796 IDH3GP51553 393 aaPredicted RBP12.74□□□□□ -0.37
LYSMD4-204ENST00000409796 C21orf62-AS1Q17RA5 79 aa12.74□□□□□ -0.37
LYSMD4-204ENST00000409796 ZNF645Q8N7E2 425 aa12.74□□□□□ -0.37
LYSMD4-204ENST00000409796 SLC25A40Q8TBP6 338 aa12.74□□□□□ -0.37
LYSMD4-204ENST00000409796 OR2D2Q9H210 308 aa12.74□□□□□ -0.37
LYSMD4-204ENST00000409796 CLN8Q9UBY8 286 aa12.74□□□□□ -0.37
LYSMD4-204ENST00000409796 HSPB7Q9UBY9 170 aa12.74□□□□□ -0.37
LYSMD4-204ENST00000409796 TIMM9Q9Y5J7 89 aa12.74□□□□□ -0.37
LYSMD4-204ENST00000409796 C21orf140B9A014 251 aa12.74□□□□□ -0.37
LYSMD4-204ENST00000409796 OPN1MWP04001 364 aa12.74□□□□□ -0.37
LYSMD4-204ENST00000409796 OPN1MW2P0DN77 364 aa12.74□□□□□ -0.37
LYSMD4-204ENST00000409796 OPN1MW3P0DN78 364 aa12.74□□□□□ -0.37
LYSMD4-204ENST00000409796 HOXA4Q00056 320 aaPredicted RBP12.74□□□□□ -0.37
LYSMD4-204ENST00000409796 ADIRFQ15847 76 aa12.74□□□□□ -0.37
LYSMD4-204ENST00000409796 BEND2Q8NDZ0 799 aa12.74□□□□□ -0.37
LYSMD4-204ENST00000409796 OR52L2PQ8NGH6 319 aa12.74□□□□□ -0.37
LYSMD4-204ENST00000409796 NOL4LQ96MY1 436 aaPredicted RBP12.74□□□□□ -0.37
LYSMD4-204ENST00000409796 SMIM7Q9BQ49 75 aa12.74□□□□□ -0.37
LYSMD4-204ENST00000409796 CTDSP1Q9GZU7 261 aa12.74□□□□□ -0.37
LYSMD4-204ENST00000409796 SLC25A22Q9H936 323 aa12.74□□□□□ -0.37
LYSMD4-204ENST00000409796 CDH20Q9HBT6 801 aa12.74□□□□□ -0.37
LYSMD4-204ENST00000409796 SPRR3Q9UBC9 169 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms