RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 HOGA1Q86XE5 327 aa15.2■□□□□ 0.02
RTN4-207ENST00000402434 OR2D2Q9H210 308 aa15.2■□□□□ 0.02
RTN4-207ENST00000402434 VWFP04275 2813 aa15.2■□□□□ 0.02
RTN4-207ENST00000402434 NBEAL1Q6ZS30 2694 aa15.2■□□□□ 0.02
RTN4-207ENST00000402434 EIF4EP06730 217 aaKnown RBP15.2■□□□□ 0.02
RTN4-207ENST00000402434 ZNF182P17025 639 aaPredicted RBP15.2■□□□□ 0.02
RTN4-207ENST00000402434 CBX5P45973 191 aa15.2■□□□□ 0.02
RTN4-207ENST00000402434 TMBIM6P55061 237 aa15.2■□□□□ 0.02
RTN4-207ENST00000402434 TMEM69Q5SWH9 247 aa15.2■□□□□ 0.02
RTN4-207ENST00000402434 FAM131AQ6UXB0 335 aa15.2■□□□□ 0.02
RTN4-207ENST00000402434 GLDNQ6ZMI3 551 aaPredicted RBP15.2■□□□□ 0.02
RTN4-207ENST00000402434 GVQW1Q8N7I0 195 aa15.2■□□□□ 0.02
RTN4-207ENST00000402434 C11orf44Q8N8P7 122 aa15.2■□□□□ 0.02
RTN4-207ENST00000402434 DRAXINQ8NBI3 349 aaPredicted RBP15.2■□□□□ 0.02
RTN4-207ENST00000402434 BEST4Q8NFU0 473 aa15.2■□□□□ 0.02
RTN4-207ENST00000402434 NPBQ8NG41 125 aa15.2■□□□□ 0.02
RTN4-207ENST00000402434 RAB2BQ8WUD1 216 aa15.2■□□□□ 0.02
RTN4-207ENST00000402434 CD28P10747 220 aa15.19■□□□□ 0.02
RTN4-207ENST00000402434 TAS2R20P59543 309 aa15.19■□□□□ 0.02
RTN4-207ENST00000402434 MMDQ15546 238 aa15.19■□□□□ 0.02
RTN4-207ENST00000402434 CENPVQ7Z7K6 275 aaPredicted RBP15.19■□□□□ 0.02
RTN4-207ENST00000402434 CLVS1Q8IUQ0 354 aaPredicted RBP15.19■□□□□ 0.02
RTN4-207ENST00000402434 ZNF383Q8NA42 475 aa15.19■□□□□ 0.02
RTN4-207ENST00000402434 OR5AU1Q8NGC0 362 aa15.19■□□□□ 0.02
RTN4-207ENST00000402434 AP3S1Q92572 193 aa15.19■□□□□ 0.02
RTN4-207ENST00000402434 RASL11BQ9BPW5 248 aa15.19■□□□□ 0.02
RTN4-207ENST00000402434 BCL7BQ9BQE9 202 aa15.19■□□□□ 0.02
RTN4-207ENST00000402434 SDHAF2Q9NX18 166 aa15.19■□□□□ 0.02
RTN4-207ENST00000402434 OR2W1Q9Y3N9 320 aa15.19■□□□□ 0.02
RTN4-207ENST00000402434 TET2Q6N021 2002 aaPredicted RBP15.18■□□□□ 0.02
RTN4-207ENST00000402434 FBXO24O75426 580 aa15.18■□□□□ 0.02
RTN4-207ENST00000402434 HLA-DQB1P01920 261 aa15.18■□□□□ 0.02
RTN4-207ENST00000402434 SPCS2Q15005 226 aa15.18■□□□□ 0.02
RTN4-207ENST00000402434 SLC35E3Q7Z769 313 aa15.18■□□□□ 0.02
RTN4-207ENST00000402434 RNF5Q99942 180 aa15.18■□□□□ 0.02
RTN4-207ENST00000402434 WASHC3Q9Y3C0 194 aa15.18■□□□□ 0.02
RTN4-207ENST00000402434 LINC01548A6NM66 108 aa15.17■□□□□ 0.02
RTN4-207ENST00000402434 M0R1X1 148 aa15.17■□□□□ 0.02
RTN4-207ENST00000402434 NBR2O15453 112 aa15.17■□□□□ 0.02
RTN4-207ENST00000402434 HPGDSO60760 199 aa15.17■□□□□ 0.02
RTN4-207ENST00000402434 RBBP9O75884 186 aa15.17■□□□□ 0.02
RTN4-207ENST00000402434 NDUFA3O95167 84 aa15.17■□□□□ 0.02
RTN4-207ENST00000402434 ELK1P19419 428 aa15.17■□□□□ 0.02
RTN4-207ENST00000402434 NFYAP23511 347 aaPredicted RBP15.17■□□□□ 0.02
RTN4-207ENST00000402434 CNTFRP26992 372 aa15.17■□□□□ 0.02
RTN4-207ENST00000402434 LINC00205P59089 165 aa15.17■□□□□ 0.02
RTN4-207ENST00000402434 CD83Q01151 205 aa15.17■□□□□ 0.02
RTN4-207ENST00000402434 MZT2AQ6P582 158 aa15.17■□□□□ 0.02
RTN4-207ENST00000402434 SNAPC3Q92966 411 aa15.17■□□□□ 0.02
RTN4-207ENST00000402434 C5orf30Q96GV9 206 aa15.17■□□□□ 0.02
RTN4-207ENST00000402434 ANAPC10Q9UM13 185 aa15.17■□□□□ 0.02
RTN4-207ENST00000402434 RBM7Q9Y580 266 aaKnown RBP15.17■□□□□ 0.02
RTN4-207ENST00000402434 SMIM31A0A1B0GVY4 71 aa15.16■□□□□ 0.02
RTN4-207ENST00000402434 TUSC2O75896 110 aa15.16■□□□□ 0.02
RTN4-207ENST00000402434 SOX6P35712 828 aa15.16■□□□□ 0.02
RTN4-207ENST00000402434 C2orf68Q2NKX9 166 aa15.16■□□□□ 0.02
RTN4-207ENST00000402434 TCTEX1D4Q5JR98 221 aa15.16■□□□□ 0.02
RTN4-207ENST00000402434 HIST2H2BDQ6DRA6 164 aa15.16■□□□□ 0.02
RTN4-207ENST00000402434 TREML4Q6UXN2 200 aa15.16■□□□□ 0.02
RTN4-207ENST00000402434 FOXRED2Q8IWF2 684 aa15.16■□□□□ 0.02
RTN4-207ENST00000402434 CHPT1Q8WUD6 406 aa15.16■□□□□ 0.02
RTN4-207ENST00000402434 NOL4LQ96MY1 436 aaPredicted RBP15.16■□□□□ 0.02
RTN4-207ENST00000402434 H7C2Y5 167 aa15.15■□□□□ 0.02
RTN4-207ENST00000402434 KCNAB3O43448 404 aa15.15■□□□□ 0.02
RTN4-207ENST00000402434 IGKV1-16P04430 117 aa15.15■□□□□ 0.02
RTN4-207ENST00000402434 PRSS3P35030 304 aa15.15■□□□□ 0.02
RTN4-207ENST00000402434 LUMP51884 338 aaPredicted RBP15.15■□□□□ 0.02
RTN4-207ENST00000402434 ARPC4P59998 168 aa15.15■□□□□ 0.02
RTN4-207ENST00000402434 C5orf64Q2M2E5 130 aa15.15■□□□□ 0.02
RTN4-207ENST00000402434 C10orf99Q6UWK7 81 aa15.15■□□□□ 0.02
RTN4-207ENST00000402434 CITED2Q99967 270 aaPredicted RBP15.15■□□□□ 0.02
RTN4-207ENST00000402434 HSPB9Q9BQS6 159 aa15.15■□□□□ 0.02
RTN4-207ENST00000402434 SCOCQ9UIL1 159 aa15.15■□□□□ 0.02
RTN4-207ENST00000402434 PSMB11A5LHX3 300 aa15.14■□□□□ 0.01
RTN4-207ENST00000402434 ADARB2-AS1A8MUL3 147 aa15.14■□□□□ 0.01
RTN4-207ENST00000402434 AP4M1O00189 453 aa15.14■□□□□ 0.01
RTN4-207ENST00000402434 HLA-DRB1P01911 266 aa15.14■□□□□ 0.01
RTN4-207ENST00000402434 NAT1P18440 290 aa15.14■□□□□ 0.01
RTN4-207ENST00000402434 TAGLNQ01995 201 aaKnown RBP15.14■□□□□ 0.01
RTN4-207ENST00000402434 NDUFA11Q86Y39 141 aa15.14■□□□□ 0.01
RTN4-207ENST00000402434 PDPNQ86YL7 162 aa15.14■□□□□ 0.01
RTN4-207ENST00000402434 STPG2Q8N412 459 aa15.14■□□□□ 0.01
RTN4-207ENST00000402434 ZNF645Q8N7E2 425 aa15.14■□□□□ 0.01
RTN4-207ENST00000402434 OR5AP2Q8NGF4 316 aa15.14■□□□□ 0.01
RTN4-207ENST00000402434 NECAP2Q9NVZ3 263 aa15.14■□□□□ 0.01
RTN4-207ENST00000402434 KIAA1456Q9P272 454 aa15.14■□□□□ 0.01
RTN4-207ENST00000402434 IGKV1D-13A0A0B4J2D9 117 aa15.14■□□□□ 0.01
RTN4-207ENST00000402434 MEIS3P1A6NDR6 274 aa15.14■□□□□ 0.01
RTN4-207ENST00000402434 RRHO14718 337 aa15.14■□□□□ 0.01
RTN4-207ENST00000402434 SLC22A5O76082 557 aa15.14■□□□□ 0.01
RTN4-207ENST00000402434 TSPAN15O95858 294 aa15.14■□□□□ 0.01
RTN4-207ENST00000402434 IGLV2-14P01704 120 aa15.14■□□□□ 0.01
RTN4-207ENST00000402434 APOA2P02652 100 aa15.14■□□□□ 0.01
RTN4-207ENST00000402434 CSF1P09603 554 aa15.14■□□□□ 0.01
RTN4-207ENST00000402434 IGKV1-13P0DP09 117 aa15.14■□□□□ 0.01
RTN4-207ENST00000402434 LIN54Q6MZP7 749 aa15.14■□□□□ 0.01
RTN4-207ENST00000402434 MMP27Q9H306 513 aa15.14■□□□□ 0.01
RTN4-207ENST00000402434 IFT46Q9NQC8 304 aa15.14■□□□□ 0.01
RTN4-207ENST00000402434 ZNF107Q9UII5 783 aaPredicted RBP15.14■□□□□ 0.01
RTN4-207ENST00000402434 LINC00527Q9UJ94 153 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms