RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 GON7Q9BXV9 100 aa11.33□□□□□ -0.6
HDDC2-202ENST00000398153 PKD1L1Q8TDX9 2849 aa11.32□□□□□ -0.6
HDDC2-202ENST00000398153 IGKV1D-8A0A087WSZ0 117 aa11.32□□□□□ -0.6
HDDC2-202ENST00000398153 PROP1O75360 226 aa11.32□□□□□ -0.6
HDDC2-202ENST00000398153 TPPPO94811 219 aa11.32□□□□□ -0.6
HDDC2-202ENST00000398153 OR8U9P0C7N5 309 aa11.32□□□□□ -0.6
HDDC2-202ENST00000398153 ZNF182P17025 639 aaPredicted RBP11.32□□□□□ -0.6
HDDC2-202ENST00000398153 ACTBP60709 375 aa11.32□□□□□ -0.6
HDDC2-202ENST00000398153 C9orf152Q5JTZ5 239 aa11.32□□□□□ -0.6
HDDC2-202ENST00000398153 TMEM69Q5SWH9 247 aa11.32□□□□□ -0.6
HDDC2-202ENST00000398153 SLC35E3Q7Z769 313 aa11.32□□□□□ -0.6
HDDC2-202ENST00000398153 BEST4Q8NFU0 473 aa11.32□□□□□ -0.6
HDDC2-202ENST00000398153 OR5AU1Q8NGC0 362 aa11.32□□□□□ -0.6
HDDC2-202ENST00000398153 OR8U1Q8NH10 309 aa11.32□□□□□ -0.6
HDDC2-202ENST00000398153 ZNF580Q9UK33 172 aa11.32□□□□□ -0.6
HDDC2-202ENST00000398153 RNF150Q9ULK6 438 aa11.32□□□□□ -0.6
HDDC2-202ENST00000398153 WASHC3Q9Y3C0 194 aa11.32□□□□□ -0.6
HDDC2-202ENST00000398153 OR2W1Q9Y3N9 320 aa11.32□□□□□ -0.6
HDDC2-202ENST00000398153 RBM7Q9Y580 266 aaKnown RBP11.32□□□□□ -0.6
HDDC2-202ENST00000398153 TET2Q6N021 2002 aaPredicted RBP11.31□□□□□ -0.6
HDDC2-202ENST00000398153 H0YJW9 148 aa11.31□□□□□ -0.6
HDDC2-202ENST00000398153 AP4M1O00189 453 aa11.31□□□□□ -0.6
HDDC2-202ENST00000398153 NBR2O15453 112 aa11.31□□□□□ -0.6
HDDC2-202ENST00000398153 NDUFA3O95167 84 aa11.31□□□□□ -0.6
HDDC2-202ENST00000398153 SOX6P35712 828 aa11.31□□□□□ -0.6
HDDC2-202ENST00000398153 F2RL1P55085 397 aa11.31□□□□□ -0.6
HDDC2-202ENST00000398153 MMDQ15546 238 aa11.31□□□□□ -0.6
HDDC2-202ENST00000398153 TREML4Q6UXN2 200 aa11.31□□□□□ -0.6
HDDC2-202ENST00000398153 NDUFA11Q86Y39 141 aa11.31□□□□□ -0.6
HDDC2-202ENST00000398153 PDPNQ86YL7 162 aa11.31□□□□□ -0.6
HDDC2-202ENST00000398153 COMMD1Q8N668 190 aa11.31□□□□□ -0.6
HDDC2-202ENST00000398153 OR4X2Q8NGF9 303 aa11.31□□□□□ -0.6
HDDC2-202ENST00000398153 ADTRPQ96IZ2 230 aa11.31□□□□□ -0.6
HDDC2-202ENST00000398153 NAA50Q9GZZ1 169 aaKnown RBP11.31□□□□□ -0.6
HDDC2-202ENST00000398153 OR2D2Q9H210 308 aa11.31□□□□□ -0.6
HDDC2-202ENST00000398153 MMP27Q9H306 513 aa11.31□□□□□ -0.6
HDDC2-202ENST00000398153 KIAA1456Q9P272 454 aa11.31□□□□□ -0.6
HDDC2-202ENST00000398153 COMMD3Q9UBI1 195 aa11.31□□□□□ -0.6
HDDC2-202ENST00000398153 H7C2Y5 167 aa11.3□□□□□ -0.6
HDDC2-202ENST00000398153 HLA-DRB1P01911 266 aa11.3□□□□□ -0.6
HDDC2-202ENST00000398153 HLA-DQB1P01920 261 aa11.3□□□□□ -0.6
HDDC2-202ENST00000398153 APOA2P02652 100 aa11.3□□□□□ -0.6
HDDC2-202ENST00000398153 OPN1MWP04001 364 aa11.3□□□□□ -0.6
HDDC2-202ENST00000398153 OPN1MW2P0DN77 364 aa11.3□□□□□ -0.6
HDDC2-202ENST00000398153 OPN1MW3P0DN78 364 aa11.3□□□□□ -0.6
HDDC2-202ENST00000398153 RRASP10301 218 aa11.3□□□□□ -0.6
HDDC2-202ENST00000398153 LUMP51884 338 aaPredicted RBP11.3□□□□□ -0.6
HDDC2-202ENST00000398153 TAS2R20P59543 309 aa11.3□□□□□ -0.6
HDDC2-202ENST00000398153 ARPC4P59998 168 aa11.3□□□□□ -0.6
HDDC2-202ENST00000398153 SLC35B1P78383 322 aa11.3□□□□□ -0.6
HDDC2-202ENST00000398153 CD83Q01151 205 aa11.3□□□□□ -0.6
HDDC2-202ENST00000398153 TMEM95Q3KNT9 176 aa11.3□□□□□ -0.6
HDDC2-202ENST00000398153 FAM131AQ6UXB0 335 aa11.3□□□□□ -0.6
HDDC2-202ENST00000398153 C15orf40Q8WUR7 153 aa11.3□□□□□ -0.6
HDDC2-202ENST00000398153 NECAP2Q9NVZ3 263 aa11.3□□□□□ -0.6
HDDC2-202ENST00000398153 SDHAF2Q9NX18 166 aa11.3□□□□□ -0.6
HDDC2-202ENST00000398153 SCOCQ9UIL1 159 aa11.3□□□□□ -0.6
HDDC2-202ENST00000398153 PSMB11A5LHX3 300 aa11.29□□□□□ -0.6
HDDC2-202ENST00000398153 TUSC2O75896 110 aa11.29□□□□□ -0.6
HDDC2-202ENST00000398153 SPDEFO95238 335 aa11.29□□□□□ -0.6
HDDC2-202ENST00000398153 IGF1P05019 195 aa11.29□□□□□ -0.6
HDDC2-202ENST00000398153 CSF1P09603 554 aa11.29□□□□□ -0.6
HDDC2-202ENST00000398153 PRSS3P35030 304 aa11.29□□□□□ -0.6
HDDC2-202ENST00000398153 LGALS7P47929 136 aa11.29□□□□□ -0.6
HDDC2-202ENST00000398153 THBS3P49746 956 aa11.29□□□□□ -0.6
HDDC2-202ENST00000398153 CBX3Q13185 183 aa11.29□□□□□ -0.6
HDDC2-202ENST00000398153 MSMO1Q15800 293 aa11.29□□□□□ -0.6
HDDC2-202ENST00000398153 C5orf64Q2M2E5 130 aa11.29□□□□□ -0.6
HDDC2-202ENST00000398153 LIN54Q6MZP7 749 aa11.29□□□□□ -0.6
HDDC2-202ENST00000398153 CLVS1Q8IUQ0 354 aaPredicted RBP11.29□□□□□ -0.6
HDDC2-202ENST00000398153 ZNF645Q8N7E2 425 aa11.29□□□□□ -0.6
HDDC2-202ENST00000398153 OR5AP2Q8NGF4 316 aa11.29□□□□□ -0.6
HDDC2-202ENST00000398153 TSNAXQ99598 290 aaKnown RBP11.29□□□□□ -0.6
HDDC2-202ENST00000398153 SCPEP1Q9HB40 452 aa11.29□□□□□ -0.6
HDDC2-202ENST00000398153 IFT46Q9NQC8 304 aa11.29□□□□□ -0.6
HDDC2-202ENST00000398153 ADAM30Q9UKF2 790 aa11.29□□□□□ -0.6
HDDC2-202ENST00000398153 TRRAPQ9Y4A5 3859 aa11.28□□□□□ -0.6
HDDC2-202ENST00000398153 SH2D7A6NKC9 451 aaPredicted RBP11.28□□□□□ -0.6
HDDC2-202ENST00000398153 M0R1X1 148 aa11.28□□□□□ -0.6
HDDC2-202ENST00000398153 SULT1C2O00338 296 aa11.28□□□□□ -0.6
HDDC2-202ENST00000398153 NOL3O60936 208 aaKnown RBP11.28□□□□□ -0.6
HDDC2-202ENST00000398153 EIF4EP06730 217 aaKnown RBP11.28□□□□□ -0.6
HDDC2-202ENST00000398153 OR5H8P0DN80 308 aa11.28□□□□□ -0.6
HDDC2-202ENST00000398153 CD28P10747 220 aa11.28□□□□□ -0.6
HDDC2-202ENST00000398153 NAT1P18440 290 aa11.28□□□□□ -0.6
HDDC2-202ENST00000398153 STPG2Q8N412 459 aa11.28□□□□□ -0.6
HDDC2-202ENST00000398153 GVQW1Q8N7I0 195 aa11.28□□□□□ -0.6
HDDC2-202ENST00000398153 ZNF383Q8NA42 475 aa11.28□□□□□ -0.6
HDDC2-202ENST00000398153 GIMAP1Q8WWP7 306 aa11.28□□□□□ -0.6
HDDC2-202ENST00000398153 FLYWCH2Q96CP2 140 aaKnown RBP11.28□□□□□ -0.6
HDDC2-202ENST00000398153 ZNF107Q9UII5 783 aaPredicted RBP11.28□□□□□ -0.6
HDDC2-202ENST00000398153 ANAPC10Q9UM13 185 aa11.28□□□□□ -0.6
HDDC2-202ENST00000398153 TSSC4Q9Y5U2 329 aaPredicted RBP11.28□□□□□ -0.6
HDDC2-202ENST00000398153 RRHO14718 337 aa11.27□□□□□ -0.61
HDDC2-202ENST00000398153 ELK1P19419 428 aa11.27□□□□□ -0.61
HDDC2-202ENST00000398153 NFYAP23511 347 aaPredicted RBP11.27□□□□□ -0.61
HDDC2-202ENST00000398153 SLC6A1P30531 599 aa11.27□□□□□ -0.61
HDDC2-202ENST00000398153 TAS2R46P59540 309 aa11.27□□□□□ -0.61
HDDC2-202ENST00000398153 CDK10Q15131 360 aa11.27□□□□□ -0.61
HDDC2-202ENST00000398153 RTL8BQ17RB0 113 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms