RNA–Protein interactions for RNA: ENST00000394435.2

PRDM5-202, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,492 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-202ENST00000394435 IGHV2OR16-5A0A0B4J2B6 119 aa13.93□□□□□ -0.18
PRDM5-202ENST00000394435 IGHV1-18A0A0C4DH31 117 aa13.93□□□□□ -0.18
PRDM5-202ENST00000394435 BCL2P10415 239 aa13.93□□□□□ -0.18
PRDM5-202ENST00000394435 TMEM41BQ5BJD5 291 aa13.93□□□□□ -0.18
PRDM5-202ENST00000394435 PARD6AQ9NPB6 346 aa13.93□□□□□ -0.18
PRDM5-202ENST00000394435 PLSCR4Q9NRQ2 329 aa13.93□□□□□ -0.18
PRDM5-202ENST00000394435 CISD1Q9NZ45 108 aaKnown RBP13.93□□□□□ -0.18
PRDM5-202ENST00000394435 LRRC30A6NM36 301 aa13.92□□□□□ -0.18
PRDM5-202ENST00000394435 NQO2P16083 231 aa13.92□□□□□ -0.18
PRDM5-202ENST00000394435 RPS16P62249 146 aaKnown RBP13.92□□□□□ -0.18
PRDM5-202ENST00000394435 SERF2P84101 59 aa13.92□□□□□ -0.18
PRDM5-202ENST00000394435 CHD3Q12873 2000 aaKnown RBP13.92□□□□□ -0.18
PRDM5-202ENST00000394435 DEFB109BQ30KR1 87 aa13.92□□□□□ -0.18
PRDM5-202ENST00000394435 CD177Q8N6Q3 437 aa13.92□□□□□ -0.18
PRDM5-202ENST00000394435 LRRC29Q8WV35 223 aa13.92□□□□□ -0.18
PRDM5-202ENST00000394435 TOLLIPQ9H0E2 274 aa13.92□□□□□ -0.18
PRDM5-202ENST00000394435 A0A087WWC5 75 aa13.92□□□□□ -0.18
PRDM5-202ENST00000394435 ST8SIA5O15466 376 aa13.92□□□□□ -0.18
PRDM5-202ENST00000394435 IGLV1-44P01699 117 aa13.92□□□□□ -0.18
PRDM5-202ENST00000394435 RPS10P46783 165 aaKnown RBP13.92□□□□□ -0.18
PRDM5-202ENST00000394435 LTC4SQ16873 150 aa13.92□□□□□ -0.18
PRDM5-202ENST00000394435 SMIM21Q3B7S5 101 aa13.92□□□□□ -0.18
PRDM5-202ENST00000394435 FAM90A2PQ658T7 463 aa13.92□□□□□ -0.18
PRDM5-202ENST00000394435 ALKBH2Q6NS38 261 aa13.92□□□□□ -0.18
PRDM5-202ENST00000394435 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.92□□□□□ -0.18
PRDM5-202ENST00000394435 URGCP-MRPS24S4R325 110 aa13.92□□□□□ -0.18
PRDM5-202ENST00000394435 TNFSF13O75888 250 aa13.91□□□□□ -0.18
PRDM5-202ENST00000394435 IFNA17P01571 189 aa13.91□□□□□ -0.18
PRDM5-202ENST00000394435 EDDM3AQ14507 147 aa13.91□□□□□ -0.18
PRDM5-202ENST00000394435 BEND4Q6ZU67 534 aa13.91□□□□□ -0.18
PRDM5-202ENST00000394435 SLC35E3Q7Z769 313 aa13.91□□□□□ -0.18
PRDM5-202ENST00000394435 OR10G4Q8NGN3 311 aa13.91□□□□□ -0.18
PRDM5-202ENST00000394435 ZDHHC16Q969W1 377 aa13.91□□□□□ -0.18
PRDM5-202ENST00000394435 STARD4Q96DR4 205 aa13.91□□□□□ -0.18
PRDM5-202ENST00000394435 PARD6GQ9BYG4 376 aaPredicted RBP13.91□□□□□ -0.18
PRDM5-202ENST00000394435 METTL1Q9UBP6 276 aaKnown RBP13.91□□□□□ -0.18
PRDM5-202ENST00000394435 PROCRQ9UNN8 238 aa13.91□□□□□ -0.18
PRDM5-202ENST00000394435 PSG11Q9UQ72 335 aa13.91□□□□□ -0.18
PRDM5-202ENST00000394435 CACNA1DQ01668 2161 aa13.91□□□□□ -0.18
PRDM5-202ENST00000394435 LINC00473A8K010 186 aa13.91□□□□□ -0.18
PRDM5-202ENST00000394435 ZG16O60844 167 aa13.91□□□□□ -0.18
PRDM5-202ENST00000394435 IGHV2-5P01817 119 aa13.91□□□□□ -0.18
PRDM5-202ENST00000394435 CXCL1P09341 107 aa13.91□□□□□ -0.18
PRDM5-202ENST00000394435 ELOBQ15370 118 aa13.91□□□□□ -0.18
PRDM5-202ENST00000394435 Q3ZCU0 254 aa13.91□□□□□ -0.18
PRDM5-202ENST00000394435 SPINK9Q5DT21 86 aa13.91□□□□□ -0.18
PRDM5-202ENST00000394435 Q8WTZ3 238 aa13.91□□□□□ -0.18
PRDM5-202ENST00000394435 LURAP1Q96LR2 239 aa13.91□□□□□ -0.18
PRDM5-202ENST00000394435 ZNF71Q9NQZ8 489 aaPredicted RBP13.91□□□□□ -0.18
PRDM5-202ENST00000394435 DKK4Q9UBT3 224 aa13.91□□□□□ -0.18
PRDM5-202ENST00000394435 LOC400499M0QZD8 3231 aa13.91□□□□□ -0.18
PRDM5-202ENST00000394435 MAP1LC3B2A6NCE7 125 aa13.9□□□□□ -0.18
PRDM5-202ENST00000394435 IFNL4K9M1U5 179 aa13.9□□□□□ -0.18
PRDM5-202ENST00000394435 EGR1P18146 543 aa13.9□□□□□ -0.18
PRDM5-202ENST00000394435 MBNL2Q5VZF2 373 aaKnown RBP13.9□□□□□ -0.18
PRDM5-202ENST00000394435 BHLHA15Q7RTS1 189 aaPredicted RBP13.9□□□□□ -0.18
PRDM5-202ENST00000394435 SLC16A13Q7RTY0 426 aa13.9□□□□□ -0.18
PRDM5-202ENST00000394435 OR2Z1Q8NG97 314 aa13.9□□□□□ -0.18
PRDM5-202ENST00000394435 TAAR6Q96RI8 345 aa13.9□□□□□ -0.18
PRDM5-202ENST00000394435 MAP1LC3BQ9GZQ8 125 aa13.9□□□□□ -0.18
PRDM5-202ENST00000394435 IGKV1D-33P01593 117 aa13.9□□□□□ -0.18
PRDM5-202ENST00000394435 IGKV1-33P01594 117 aa13.9□□□□□ -0.18
PRDM5-202ENST00000394435 ERVFRD-1P60508 538 aa13.9□□□□□ -0.18
PRDM5-202ENST00000394435 H2BFWTQ7Z2G1 175 aa13.9□□□□□ -0.18
PRDM5-202ENST00000394435 NANPQ8TBE9 248 aa13.9□□□□□ -0.18
PRDM5-202ENST00000394435 CA5BP1Q8WTZ4 195 aa13.9□□□□□ -0.18
PRDM5-202ENST00000394435 PINX1Q96BK5 328 aaKnown RBP13.9□□□□□ -0.18
PRDM5-202ENST00000394435 PLPPR2Q96GM1 343 aa13.9□□□□□ -0.18
PRDM5-202ENST00000394435 PRRC2CQ9Y520 2896 aaKnown RBP13.9□□□□□ -0.18
PRDM5-202ENST00000394435 TGIF2-C20orf24A0A0A6YYL0 155 aa13.89□□□□□ -0.19
PRDM5-202ENST00000394435 CEBPZOSA8MTT3 80 aa13.89□□□□□ -0.19
PRDM5-202ENST00000394435 RBMXL2O75526 392 aaKnown RBP13.89□□□□□ -0.19
PRDM5-202ENST00000394435 CLDN14O95500 239 aa13.89□□□□□ -0.19
PRDM5-202ENST00000394435 CGAP01215 116 aa13.89□□□□□ -0.19
PRDM5-202ENST00000394435 TUBG1P23258 451 aa13.89□□□□□ -0.19
PRDM5-202ENST00000394435 PRDX2P32119 198 aa13.89□□□□□ -0.19
PRDM5-202ENST00000394435 MSMPQ1L6U9 139 aa13.89□□□□□ -0.19
PRDM5-202ENST00000394435 LRP11Q86VZ4 500 aa13.89□□□□□ -0.19
PRDM5-202ENST00000394435 C1QL4Q86Z23 238 aa13.89□□□□□ -0.19
PRDM5-202ENST00000394435 DTD1Q8TEA8 209 aa13.89□□□□□ -0.19
PRDM5-202ENST00000394435 TUBG2Q9NRH3 451 aa13.89□□□□□ -0.19
PRDM5-202ENST00000394435 USF3Q68DE3 2245 aa13.89□□□□□ -0.19
PRDM5-202ENST00000394435 ZNF891A8MT65 544 aaPredicted RBP13.89□□□□□ -0.19
PRDM5-202ENST00000394435 AHRRA9YTQ3 701 aa13.89□□□□□ -0.19
PRDM5-202ENST00000394435 C15orf65H3BRN8 121 aa13.89□□□□□ -0.19
PRDM5-202ENST00000394435 AP4M1O00189 453 aa13.89□□□□□ -0.19
PRDM5-202ENST00000394435 RAB29O14966 203 aa13.89□□□□□ -0.19
PRDM5-202ENST00000394435 ACSM6Q6P461 480 aa13.89□□□□□ -0.19
PRDM5-202ENST00000394435 RPP25LQ8N5L8 163 aaKnown RBP13.89□□□□□ -0.19
PRDM5-202ENST00000394435 SLC39A9Q9NUM3 307 aa13.89□□□□□ -0.19
PRDM5-202ENST00000394435 DUSP13Q9UII6 198 aa13.89□□□□□ -0.19
PRDM5-202ENST00000394435 INTS1Q8N201 2190 aaKnown RBP13.89□□□□□ -0.19
PRDM5-202ENST00000394435 PMS2P5A8MQ11 134 aa13.88□□□□□ -0.19
PRDM5-202ENST00000394435 HMGB3O15347 200 aaKnown RBP13.88□□□□□ -0.19
PRDM5-202ENST00000394435 SEM1Q6ZVN7 128 aa13.88□□□□□ -0.19
PRDM5-202ENST00000394435 LHX4Q969G2 390 aa13.88□□□□□ -0.19
PRDM5-202ENST00000394435 SIRT7Q9NRC8 400 aa13.88□□□□□ -0.19
PRDM5-202ENST00000394435 HEATR1Q9H583 2144 aaKnown RBP13.88□□□□□ -0.19
PRDM5-202ENST00000394435 SPINT2O43291 252 aa13.88□□□□□ -0.19
PRDM5-202ENST00000394435 S100A8P05109 93 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms