RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 MEIS3Q99687 375 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 IGKV1D-13A0A0B4J2D9 117 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 A0A0G2JRQ6 117 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 A0A1W2PS18 150 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 PRORSD1PA6NEY8 169 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 KNCNA6PVL3 124 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 LYPLA1O75608 230 aaPredicted RBP2.86□□□□□ -1.95
XRN1-202ENST00000392981 IGHG4P01861 327 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 SOD3P08294 240 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 IGKV1-13P0DP09 117 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 WT1P19544 449 aaPredicted RBP2.86□□□□□ -1.95
XRN1-202ENST00000392981 TMUB2Q71RG4 321 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 ZNF627Q7L945 461 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 PNKDQ8N490 385 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 SPICQ8N5J4 248 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 OR2G3Q8NGZ4 309 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 OR10A6Q8NH74 314 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 APOBEC3DQ96AK3 386 aaPredicted RBP2.86□□□□□ -1.95
XRN1-202ENST00000392981 SEH1LQ96EE3 360 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 TMEM204Q9BSN7 226 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 TMEM147Q9BVK8 224 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 ZBP1Q9H171 429 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 TLNRD1Q9H1K6 362 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 ERVK-7P63135 1459 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 ATP7BP35670 1465 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 INMT-MINDY4F8WBC2 141 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 TRAPPC2LH3BP13 241 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 UBE2L6O14933 153 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 C8orf88P0DMB2 117 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 MGST1P10620 155 aaKnown RBP2.86□□□□□ -1.95
XRN1-202ENST00000392981 LOXP28300 417 aaPredicted RBP2.86□□□□□ -1.95
XRN1-202ENST00000392981 GABRA4P48169 554 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 UBE2AP49459 152 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 PIGPP57054 158 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 SLC7A9P82251 487 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 KIAA0087Q14695 138 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 TWIST1Q15672 202 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 HIST3H3Q16695 136 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 ZNF791Q3KP31 576 aaPredicted RBP2.86□□□□□ -1.95
XRN1-202ENST00000392981 C6orf99Q4VX62 202 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 ORMDL2Q53FV1 153 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 C6orf52Q5T4I8 152 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 SCIMPQ6UWF3 145 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 RPL36ALQ969Q0 106 aaKnown RBP2.86□□□□□ -1.95
XRN1-202ENST00000392981 SLC45A3Q96JT2 553 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 YPEL4Q96NS1 127 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 TRAPPC2LQ9UL33 140 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 SLC35A3Q9Y2D2 325 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 ANKRD36CQ5JPF3 1778 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 ITGB4P16144 1822 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 TMEM2Q9UHN6 1383 aa2.86□□□□□ -1.95
XRN1-202ENST00000392981 C5P01031 1676 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 LY75O60449 1722 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 QSER1Q2KHR3 1735 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 KDM3BQ7LBC6 1761 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 A0A087WUJ7 227 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 A0A0U1RQV1 116 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 LOC389332A0A1B0GUA5 103 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 DHRS12A0PJE2 317 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 BBIP1A8MTZ0 92 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 DNASE2O00115 360 aaPredicted RBP2.85□□□□□ -1.95
XRN1-202ENST00000392981 IGHV3-9P01782 118 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 SEMG1P04279 462 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 HLA-DPB1P04440 258 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 ZNF286BP0CG31 522 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 DDTP30046 118 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 PPP1CAP62136 330 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 PAX8Q06710 450 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 OR8G1Q15617 311 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 C9orf64Q5T6V5 341 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 SLC25A42Q86VD7 318 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 BAGE3Q86Y29 109 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 BAGE2Q86Y30 109 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 GAPTQ8N292 157 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 KLK6Q92876 244 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 SOSTQ9BQB4 213 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 OR2J1Q9GZK6 312 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 SPANXA1Q9NS26 97 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 FOXI3A8MTJ6 420 aaPredicted RBP2.85□□□□□ -1.95
XRN1-202ENST00000392981 RAMP1O60894 148 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 TSPOP30536 169 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 RPL34P49207 117 aaKnown RBP2.85□□□□□ -1.95
XRN1-202ENST00000392981 ZNF83P51522 516 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 FXYD6P3P58550 94 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 EIF4EBP2Q13542 120 aaPredicted RBP2.85□□□□□ -1.95
XRN1-202ENST00000392981 PEA15Q15121 130 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 Q5BKY6 102 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 HENMT1Q5T8I9 393 aaKnown RBP2.85□□□□□ -1.95
XRN1-202ENST00000392981 PHF13Q86YI8 300 aaPredicted RBP2.85□□□□□ -1.95
XRN1-202ENST00000392981 SVBPQ8N300 66 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 C9orf62Q8N4C0 152 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 OR10D3Q8NH80 312 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 HYLS1Q96M11 299 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 OR7D2Q96RA2 312 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 HEBP1Q9NRV9 189 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 COL5A2P05997 1499 aaPredicted RBP2.85□□□□□ -1.95
XRN1-202ENST00000392981 IGHV3OR16-12A0A075B7B8 117 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 GSTZ1O43708 216 aaPredicted RBP2.85□□□□□ -1.95
XRN1-202ENST00000392981 STK16O75716 305 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 CD8AP01732 235 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms