RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 OR2T10Q8NGZ9 312 aa9.4□□□□□ -0.9
LINC00654-201ENST00000379053 LEAP2Q969E1 77 aa9.4□□□□□ -0.9
LINC00654-201ENST00000379053 PTX4Q96A99 478 aa9.4□□□□□ -0.9
LINC00654-201ENST00000379053 EEF1AKMT3Q96AZ1 226 aa9.4□□□□□ -0.9
LINC00654-201ENST00000379053 NPVFQ9HCQ7 196 aa9.4□□□□□ -0.9
LINC00654-201ENST00000379053 CYB5R1Q9UHQ9 305 aa9.4□□□□□ -0.9
LINC00654-201ENST00000379053 THSD7AQ9UPZ6 1657 aa9.4□□□□□ -0.9
LINC00654-201ENST00000379053 PLAUP00749 431 aa9.4□□□□□ -0.9
LINC00654-201ENST00000379053 LINC00869P0C866 280 aa9.4□□□□□ -0.9
LINC00654-201ENST00000379053 OR4C13Q8NGP0 309 aa9.4□□□□□ -0.9
LINC00654-201ENST00000379053 M0R143 59 aa9.4□□□□□ -0.9
LINC00654-201ENST00000379053 ISG15P05161 165 aa9.4□□□□□ -0.9
LINC00654-201ENST00000379053 RND2P52198 227 aa9.4□□□□□ -0.9
LINC00654-201ENST00000379053 ZNF645Q8N7E2 425 aa9.4□□□□□ -0.9
LINC00654-201ENST00000379053 TSPOP30536 169 aa9.4□□□□□ -0.91
LINC00654-201ENST00000379053 SNRPD3P62318 126 aaKnown RBP9.4□□□□□ -0.91
LINC00654-201ENST00000379053 TMEM183BQ1AE95 376 aa9.4□□□□□ -0.91
LINC00654-201ENST00000379053 C1QTNF12Q5T7M4 302 aa9.4□□□□□ -0.91
LINC00654-201ENST00000379053 SSBP3Q9BWW4 388 aaPredicted RBP9.4□□□□□ -0.91
LINC00654-201ENST00000379053 A0A1W2PRX2 142 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 TMEM189A5PLL7 270 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 C5orf52A6NGY3 159 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 ZNF253O75346 499 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 S1PR2O95136 353 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 VSIG10L2P0DP72 767 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 SELENOTP62341 195 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 FXYD3Q14802 87 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 TWIST1Q15672 202 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 LYRM7Q5U5X0 104 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 PACRGQ96M98 296 aaPredicted RBP9.39□□□□□ -0.91
LINC00654-201ENST00000379053 TRAF4Q9BUZ4 470 aaPredicted RBP9.39□□□□□ -0.91
LINC00654-201ENST00000379053 ZNF703Q9H7S9 590 aaPredicted RBP9.39□□□□□ -0.91
LINC00654-201ENST00000379053 TMEM106BQ9NUM4 274 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 CTDSPLO15194 276 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 COX5BP10606 129 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 BSPH1Q075Z2 132 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 PMS2P11Q13670 270 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 HSD17B13Q7Z5P4 300 aaPredicted RBP9.39□□□□□ -0.91
LINC00654-201ENST00000379053 BPIFA4PQ86YQ2 179 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 TCTEX1D1Q8N7M0 179 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 TMEM186Q96B77 213 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 ZNF107Q9UII5 783 aaPredicted RBP9.39□□□□□ -0.91
LINC00654-201ENST00000379053 TRBV5-3A0A0A0MS03 114 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 ZNF729A6NN14 1252 aaPredicted RBP9.39□□□□□ -0.91
LINC00654-201ENST00000379053 NPIPB11E5RHQ5 1161 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 CELA3AP09093 270 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 CLDN18P56856 261 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 SPTBN2O15020 2390 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 TRAV30A0A087WSZ9 112 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 AP4M1O00189 453 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 PDE6DO43924 150 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 TRGV3P03979 118 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 SCTP09683 121 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 HOXA6P31267 233 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 GLRXP35754 106 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 RAB9AP51151 201 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 RELQ04864 619 aaPredicted RBP9.39□□□□□ -0.91
LINC00654-201ENST00000379053 MRPL30Q8TCC3 161 aaKnown RBP9.39□□□□□ -0.91
LINC00654-201ENST00000379053 GSX1Q9H4S2 264 aaPredicted RBP9.39□□□□□ -0.91
LINC00654-201ENST00000379053 M0R3E3 92 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 RFPL3SP0C7P2 107 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 NPPCP23582 126 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 CDKN1AP38936 164 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 EFNB2P52799 333 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 NUTF2P61970 127 aaKnown RBP9.39□□□□□ -0.91
LINC00654-201ENST00000379053 SRSF9Q13242 221 aaKnown RBP eCLIP9.39□□□□□ -0.91
LINC00654-201ENST00000379053 SNAI3Q3KNW1 292 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 VAX2Q9UIW0 290 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 MOB4Q9Y3A3 225 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 ABCA3Q99758 1704 aa9.39□□□□□ -0.91
LINC00654-201ENST00000379053 HIST1H1BP16401 226 aaKnown RBP9.38□□□□□ -0.91
LINC00654-201ENST00000379053 SMUG1Q53HV7 270 aa9.38□□□□□ -0.91
LINC00654-201ENST00000379053 ADAD2Q8NCV1 583 aaKnown RBP9.38□□□□□ -0.91
LINC00654-201ENST00000379053 PRSS27Q9BQR3 290 aa9.38□□□□□ -0.91
LINC00654-201ENST00000379053 DLL3Q9NYJ7 618 aa9.38□□□□□ -0.91
LINC00654-201ENST00000379053 BET1LQ9NYM9 111 aa9.38□□□□□ -0.91
LINC00654-201ENST00000379053 TNFSF10P50591 281 aa9.38□□□□□ -0.91
LINC00654-201ENST00000379053 NCMAPQ5T1S8 102 aa9.38□□□□□ -0.91
LINC00654-201ENST00000379053 KLK13Q9UKR3 277 aa9.38□□□□□ -0.91
LINC00654-201ENST00000379053 TRIP12Q14669 1992 aaPredicted RBP9.38□□□□□ -0.91
LINC00654-201ENST00000379053 CTXND1A0A1B0GTU2 59 aa9.38□□□□□ -0.91
LINC00654-201ENST00000379053 IGKV3-20P01619 116 aa9.38□□□□□ -0.91
LINC00654-201ENST00000379053 CEBPEQ15744 281 aa9.38□□□□□ -0.91
LINC00654-201ENST00000379053 COX19Q49B96 90 aa9.38□□□□□ -0.91
LINC00654-201ENST00000379053 FAM53AQ6NSI3 398 aaPredicted RBP9.38□□□□□ -0.91
LINC00654-201ENST00000379053 IGHV3-35A0A0C4DH35 117 aa9.38□□□□□ -0.91
LINC00654-201ENST00000379053 ZNF324O75467 553 aaPredicted RBP9.38□□□□□ -0.91
LINC00654-201ENST00000379053 ZNF250P15622 560 aa9.38□□□□□ -0.91
LINC00654-201ENST00000379053 COMPP49747 757 aaPredicted RBP9.38□□□□□ -0.91
LINC00654-201ENST00000379053 NANOS3P60323 173 aaKnown RBP9.38□□□□□ -0.91
LINC00654-201ENST00000379053 KLF7O75840 302 aaPredicted RBP9.38□□□□□ -0.91
LINC00654-201ENST00000379053 RPL24P83731 157 aaKnown RBP9.38□□□□□ -0.91
LINC00654-201ENST00000379053 EIF4EBP2Q13542 120 aaPredicted RBP9.38□□□□□ -0.91
LINC00654-201ENST00000379053 C10orf111Q8N326 155 aa9.38□□□□□ -0.91
LINC00654-201ENST00000379053 WNT5BQ9H1J7 359 aa9.38□□□□□ -0.91
LINC00654-201ENST00000379053 ZNF430Q9H8G1 570 aaPredicted RBP9.38□□□□□ -0.91
LINC00654-201ENST00000379053 PXMP4Q9Y6I8 212 aa9.38□□□□□ -0.91
LINC00654-201ENST00000379053 ISLRO14498 428 aa9.37□□□□□ -0.91
LINC00654-201ENST00000379053 REG1AP05451 166 aa9.37□□□□□ -0.91
LINC00654-201ENST00000379053 PNRC1Q12796 327 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms