RNA–Protein interactions for RNA: ENST00000371015.5

PHACTR3-204, Transcript of phosphatase and actin regulator 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHACTR3, Length 2,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-204ENST00000371015 NT5CQ8TCD5 201 aa13.59□□□□□ -0.23
PHACTR3-204ENST00000371015 TAF15Q92804 592 aaKnown RBP eCLIP13.59□□□□□ -0.23
PHACTR3-204ENST00000371015 NEUROG1Q92886 237 aa13.59□□□□□ -0.23
PHACTR3-204ENST00000371015 FAM110AQ9BQ89 295 aa13.59□□□□□ -0.23
PHACTR3-204ENST00000371015 DUSP23Q9BVJ7 150 aa13.59□□□□□ -0.23
PHACTR3-204ENST00000371015 MS4A6AQ9H2W1 248 aa13.59□□□□□ -0.23
PHACTR3-204ENST00000371015 KCNIP1Q9NZI2 227 aa13.59□□□□□ -0.23
PHACTR3-204ENST00000371015 HS3ST3A1Q9Y663 406 aa13.59□□□□□ -0.23
PHACTR3-204ENST00000371015 PAGE4O60829 102 aa13.59□□□□□ -0.23
PHACTR3-204ENST00000371015 ARF1P84077 181 aaKnown RBP13.59□□□□□ -0.23
PHACTR3-204ENST00000371015 C17orf67Q0P5P2 114 aa13.59□□□□□ -0.23
PHACTR3-204ENST00000371015 MGAT2Q10469 447 aa13.59□□□□□ -0.23
PHACTR3-204ENST00000371015 SGCBQ16585 318 aa13.59□□□□□ -0.23
PHACTR3-204ENST00000371015 SHISA2Q6UWI4 295 aa13.59□□□□□ -0.23
PHACTR3-204ENST00000371015 C10orf35Q96D05 121 aa13.59□□□□□ -0.23
PHACTR3-204ENST00000371015 QTRT1Q9BXR0 403 aaKnown RBP13.59□□□□□ -0.23
PHACTR3-204ENST00000371015 LYRM4Q9HD34 91 aa13.59□□□□□ -0.23
PHACTR3-204ENST00000371015 LY96Q9Y6Y9 160 aa13.59□□□□□ -0.23
PHACTR3-204ENST00000371015 EDDM13A0A1B0GTR0 161 aa13.58□□□□□ -0.24
PHACTR3-204ENST00000371015 A6NDN8 102 aa13.58□□□□□ -0.24
PHACTR3-204ENST00000371015 HLA-DQA1P01909 254 aa13.58□□□□□ -0.24
PHACTR3-204ENST00000371015 FAM53BQ14153 422 aa13.58□□□□□ -0.24
PHACTR3-204ENST00000371015 SPACA5Q96QH8 159 aa13.58□□□□□ -0.24
PHACTR3-204ENST00000371015 NAT8BQ9UHF3 227 aa13.58□□□□□ -0.24
PHACTR3-204ENST00000371015 SOX1O00570 391 aaPredicted RBP13.58□□□□□ -0.24
PHACTR3-204ENST00000371015 CRXO43186 299 aaPredicted RBP13.58□□□□□ -0.24
PHACTR3-204ENST00000371015 PPOXP50336 477 aa13.58□□□□□ -0.24
PHACTR3-204ENST00000371015 GP6Q9HCN6 339 aa13.58□□□□□ -0.24
PHACTR3-204ENST00000371015 FAM60AQ9NP50 221 aa13.58□□□□□ -0.24
PHACTR3-204ENST00000371015 CENPMQ9NSP4 180 aa13.58□□□□□ -0.24
PHACTR3-204ENST00000371015 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.57□□□□□ -0.24
PHACTR3-204ENST00000371015 NPPCP23582 126 aa13.57□□□□□ -0.24
PHACTR3-204ENST00000371015 RPS15AP62244 130 aaKnown RBP13.57□□□□□ -0.24
PHACTR3-204ENST00000371015 OR8B8Q15620 311 aa13.57□□□□□ -0.24
PHACTR3-204ENST00000371015 LTC4SQ16873 150 aa13.57□□□□□ -0.24
PHACTR3-204ENST00000371015 RPEL1Q2QD12 228 aa13.57□□□□□ -0.24
PHACTR3-204ENST00000371015 FAM162BQ5T6X4 162 aa13.57□□□□□ -0.24
PHACTR3-204ENST00000371015 COA3Q9Y2R0 106 aaPredicted RBP13.57□□□□□ -0.24
PHACTR3-204ENST00000371015 TRPM6Q9BX84 2022 aa13.57□□□□□ -0.24
PHACTR3-204ENST00000371015 FAM181BA6NEQ2 426 aa13.57□□□□□ -0.24
PHACTR3-204ENST00000371015 IGKV1D-16P01601 117 aa13.57□□□□□ -0.24
PHACTR3-204ENST00000371015 GLI4P10075 376 aa13.57□□□□□ -0.24
PHACTR3-204ENST00000371015 ADH5P11766 374 aa13.57□□□□□ -0.24
PHACTR3-204ENST00000371015 SSBP2P81877 361 aaPredicted RBP13.57□□□□□ -0.24
PHACTR3-204ENST00000371015 FOXI2Q6ZQN5 318 aa13.57□□□□□ -0.24
PHACTR3-204ENST00000371015 HES4Q9HCC6 221 aa13.57□□□□□ -0.24
PHACTR3-204ENST00000371015 LOC101059948A0A1B0GTJ6 334 aa13.56□□□□□ -0.24
PHACTR3-204ENST00000371015 ANKRD30BLA7E2S9 258 aa13.56□□□□□ -0.24
PHACTR3-204ENST00000371015 F2RL2O00254 374 aa13.56□□□□□ -0.24
PHACTR3-204ENST00000371015 CELA3BP08861 270 aa13.56□□□□□ -0.24
PHACTR3-204ENST00000371015 Q56UQ5 140 aa13.56□□□□□ -0.24
PHACTR3-204ENST00000371015 LCN12Q6JVE5 192 aa13.56□□□□□ -0.24
PHACTR3-204ENST00000371015 SYT13Q7L8C5 426 aa13.56□□□□□ -0.24
PHACTR3-204ENST00000371015 RTN4RQ9BZR6 473 aa13.56□□□□□ -0.24
PHACTR3-204ENST00000371015 MRPL16Q9NX20 251 aaKnown RBP13.56□□□□□ -0.24
PHACTR3-204ENST00000371015 PDE4DIPQ5VU43 2346 aa13.56□□□□□ -0.24
PHACTR3-204ENST00000371015 SMIM10L1P0DMW3 83 aa13.56□□□□□ -0.24
PHACTR3-204ENST00000371015 COX5AP20674 150 aa13.56□□□□□ -0.24
PHACTR3-204ENST00000371015 CCL1P22362 96 aa13.56□□□□□ -0.24
PHACTR3-204ENST00000371015 GNB1P62873 340 aa13.56□□□□□ -0.24
PHACTR3-204ENST00000371015 KISS1Q15726 138 aa13.56□□□□□ -0.24
PHACTR3-204ENST00000371015 C6orf201Q7Z4U5 140 aa13.56□□□□□ -0.24
PHACTR3-204ENST00000371015 C18orf32Q8TCD1 76 aa13.56□□□□□ -0.24
PHACTR3-204ENST00000371015 SMIM10Q96HG1 83 aa13.56□□□□□ -0.24
PHACTR3-204ENST00000371015 IL36GQ9NZH8 169 aa13.56□□□□□ -0.24
PHACTR3-204ENST00000371015 COL4A2P08572 1712 aa13.56□□□□□ -0.24
PHACTR3-204ENST00000371015 TRAV36DV7A0A075B6V5 113 aa13.55□□□□□ -0.24
PHACTR3-204ENST00000371015 LAMTOR5O43504 91 aa13.55□□□□□ -0.24
PHACTR3-204ENST00000371015 STAG3L2P0CL84 134 aa13.55□□□□□ -0.24
PHACTR3-204ENST00000371015 DRD1P21728 446 aa13.55□□□□□ -0.24
PHACTR3-204ENST00000371015 DOK3Q7L591 496 aa13.55□□□□□ -0.24
PHACTR3-204ENST00000371015 VSTM2AQ8TAG5 236 aa13.55□□□□□ -0.24
PHACTR3-204ENST00000371015 SPSB4Q96A44 273 aa13.55□□□□□ -0.24
PHACTR3-204ENST00000371015 RCHY1Q96PM5 261 aa13.55□□□□□ -0.24
PHACTR3-204ENST00000371015 TMEM70Q9BUB7 260 aa13.55□□□□□ -0.24
PHACTR3-204ENST00000371015 FNDC4Q9H6D8 234 aaPredicted RBP13.55□□□□□ -0.24
PHACTR3-204ENST00000371015 PRRC2BQ5JSZ5 2229 aaKnown RBP13.55□□□□□ -0.24
PHACTR3-204ENST00000371015 C5orf67F2Z3F1 127 aa13.55□□□□□ -0.24
PHACTR3-204ENST00000371015 SERPINE2P07093 398 aa13.55□□□□□ -0.24
PHACTR3-204ENST00000371015 GPR183P32249 361 aa13.55□□□□□ -0.24
PHACTR3-204ENST00000371015 DEFB103AP81534 67 aa13.55□□□□□ -0.24
PHACTR3-204ENST00000371015 OTPQ5XKR4 325 aa13.55□□□□□ -0.24
PHACTR3-204ENST00000371015 OR5D13Q8NGL4 314 aa13.55□□□□□ -0.24
PHACTR3-204ENST00000371015 OR51E1Q8TCB6 317 aa13.55□□□□□ -0.24
PHACTR3-204ENST00000371015 FOXQ1Q9C009 403 aa13.55□□□□□ -0.24
PHACTR3-204ENST00000371015 HSBP1O75506 76 aa13.55□□□□□ -0.24
PHACTR3-204ENST00000371015 POU2F2P09086 479 aa13.55□□□□□ -0.24
PHACTR3-204ENST00000371015 NTF3P20783 257 aa13.55□□□□□ -0.24
PHACTR3-204ENST00000371015 OR10G9Q8NGN4 311 aa13.55□□□□□ -0.24
PHACTR3-204ENST00000371015 OR10G7Q8NGN6 311 aa13.55□□□□□ -0.24
PHACTR3-204ENST00000371015 LSM10Q969L4 123 aaKnown RBP13.55□□□□□ -0.24
PHACTR3-204ENST00000371015 APOBEC3DQ96AK3 386 aaPredicted RBP13.55□□□□□ -0.24
PHACTR3-204ENST00000371015 THYN1Q9P016 225 aa13.55□□□□□ -0.24
PHACTR3-204ENST00000371015 JPT1Q9UK76 154 aa13.55□□□□□ -0.24
PHACTR3-204ENST00000371015 MPDZO75970 2070 aa13.54□□□□□ -0.24
PHACTR3-204ENST00000371015 H3BMH7 237 aa13.54□□□□□ -0.24
PHACTR3-204ENST00000371015 NDUFB4O95168 129 aa13.54□□□□□ -0.24
PHACTR3-204ENST00000371015 CA7P43166 264 aa13.54□□□□□ -0.24
PHACTR3-204ENST00000371015 MLF1P58340 268 aa13.54□□□□□ -0.24
PHACTR3-204ENST00000371015 CX3CL1P78423 397 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms