RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 HMGB3O15347 200 aaKnown RBP9.26□□□□□ -0.93
SVIP-201ENST00000354193 SCO1O75880 301 aa9.26□□□□□ -0.93
SVIP-201ENST00000354193 C1QL1O75973 258 aa9.26□□□□□ -0.93
SVIP-201ENST00000354193 PCSK4Q6UW60 755 aa9.26□□□□□ -0.93
SVIP-201ENST00000354193 Q6ZSR3 168 aa9.26□□□□□ -0.93
SVIP-201ENST00000354193 H1FOOQ8IZA3 346 aaPredicted RBP9.26□□□□□ -0.93
SVIP-201ENST00000354193 KCNRGQ8N5I3 272 aa9.26□□□□□ -0.93
SVIP-201ENST00000354193 GPR146Q96CH1 333 aa9.26□□□□□ -0.93
SVIP-201ENST00000354193 EIF5A2Q9GZV4 153 aaKnown RBP9.26□□□□□ -0.93
SVIP-201ENST00000354193 DSCAMO60469 2012 aa9.26□□□□□ -0.93
SVIP-201ENST00000354193 HMSDA8MTL9 139 aa9.25□□□□□ -0.93
SVIP-201ENST00000354193 KCNJ3P48549 501 aa9.25□□□□□ -0.93
SVIP-201ENST00000354193 ERVK11-1P61568 191 aa9.25□□□□□ -0.93
SVIP-201ENST00000354193 UBA52P62987 128 aaKnown RBP9.25□□□□□ -0.93
SVIP-201ENST00000354193 SLC35E4Q6ICL7 350 aa9.25□□□□□ -0.93
SVIP-201ENST00000354193 OR2C3Q8N628 320 aa9.25□□□□□ -0.93
SVIP-201ENST00000354193 NMES1Q9C002 83 aa9.25□□□□□ -0.93
SVIP-201ENST00000354193 PSENENQ9NZ42 101 aa9.25□□□□□ -0.93
SVIP-201ENST00000354193 CLEC18AA5D8T8 446 aa9.25□□□□□ -0.93
SVIP-201ENST00000354193 DVL1O14640 695 aa9.25□□□□□ -0.93
SVIP-201ENST00000354193 COL8A2P25067 703 aa9.25□□□□□ -0.93
SVIP-201ENST00000354193 ADORA2A-AS1P86434 159 aa9.25□□□□□ -0.93
SVIP-201ENST00000354193 ZNF660Q6AZW8 331 aaPredicted RBP9.25□□□□□ -0.93
SVIP-201ENST00000354193 CLEC18CQ8NCF0 446 aa9.25□□□□□ -0.93
SVIP-201ENST00000354193 SCARB1Q8WTV0 552 aa9.25□□□□□ -0.93
SVIP-201ENST00000354193 SMG1Q96Q15 3661 aaKnown RBP9.25□□□□□ -0.93
SVIP-201ENST00000354193 CD200P41217 278 aa9.25□□□□□ -0.93
SVIP-201ENST00000354193 HOXA1P49639 335 aaPredicted RBP9.25□□□□□ -0.93
SVIP-201ENST00000354193 GNB1P62873 340 aa9.25□□□□□ -0.93
SVIP-201ENST00000354193 MOB3BQ86TA1 216 aa9.25□□□□□ -0.93
SVIP-201ENST00000354193 SELENOHQ8IZQ5 122 aaKnown RBP9.25□□□□□ -0.93
SVIP-201ENST00000354193 B9A039 149 aa9.24□□□□□ -0.93
SVIP-201ENST00000354193 K7N7A8 449 aa9.24□□□□□ -0.93
SVIP-201ENST00000354193 ERVH48-1M5A8F1 160 aa9.24□□□□□ -0.93
SVIP-201ENST00000354193 DHODHQ02127 395 aa9.24□□□□□ -0.93
SVIP-201ENST00000354193 NCR3LG1Q68D85 454 aa9.24□□□□□ -0.93
SVIP-201ENST00000354193 ABHD14AQ9BUJ0 271 aa9.24□□□□□ -0.93
SVIP-201ENST00000354193 C19orf12Q9NSK7 152 aa9.24□□□□□ -0.93
SVIP-201ENST00000354193 GPR37O15354 613 aa9.24□□□□□ -0.93
SVIP-201ENST00000354193 RUNX1Q01196 453 aa9.24□□□□□ -0.93
SVIP-201ENST00000354193 NHLRC3Q5JS37 347 aa9.24□□□□□ -0.93
SVIP-201ENST00000354193 GPR157Q5UAW9 335 aa9.24□□□□□ -0.93
SVIP-201ENST00000354193 CFAP46Q8IYW2 2715 aa9.24□□□□□ -0.93
SVIP-201ENST00000354193 RPL30P62888 115 aaKnown RBP9.24□□□□□ -0.93
SVIP-201ENST00000354193 TESK1Q15569 626 aa9.24□□□□□ -0.93
SVIP-201ENST00000354193 THNSL2Q86YJ6 484 aa9.24□□□□□ -0.93
SVIP-201ENST00000354193 R3HDM4Q96D70 268 aa9.24□□□□□ -0.93
SVIP-201ENST00000354193 RNF126Q9BV68 326 aa9.24□□□□□ -0.93
SVIP-201ENST00000354193 RAB9BQ9NP90 201 aa9.24□□□□□ -0.93
SVIP-201ENST00000354193 ZFP57Q9NU63 452 aa9.24□□□□□ -0.93
SVIP-201ENST00000354193 RNF222A6NCQ9 220 aa9.24□□□□□ -0.93
SVIP-201ENST00000354193 SLC31A2O15432 143 aa9.24□□□□□ -0.93
SVIP-201ENST00000354193 ZNF273Q14593 569 aa9.24□□□□□ -0.93
SVIP-201ENST00000354193 NCMAPQ5T1S8 102 aa9.24□□□□□ -0.93
SVIP-201ENST00000354193 MSI2Q96DH6 328 aaKnown RBP9.24□□□□□ -0.93
SVIP-201ENST00000354193 RSRP1Q9BUV0 290 aa9.24□□□□□ -0.93
SVIP-201ENST00000354193 SLC25A31Q9H0C2 315 aa9.24□□□□□ -0.93
SVIP-201ENST00000354193 ITGB1BP2Q9UKP3 347 aa9.24□□□□□ -0.93
SVIP-201ENST00000354193 ANKRD34BA5PLL1 514 aa9.23□□□□□ -0.93
SVIP-201ENST00000354193 IFNL4K9M1U5 179 aa9.23□□□□□ -0.93
SVIP-201ENST00000354193 TSPAN15O95858 294 aa9.23□□□□□ -0.93
SVIP-201ENST00000354193 SNCAP37840 140 aa9.23□□□□□ -0.93
SVIP-201ENST00000354193 OR2G3Q8NGZ4 309 aa9.23□□□□□ -0.93
SVIP-201ENST00000354193 RAB1CQ92928 201 aa9.23□□□□□ -0.93
SVIP-201ENST00000354193 BSCL2Q96G97 398 aaPredicted RBP9.23□□□□□ -0.93
SVIP-201ENST00000354193 ZNF714Q96N38 554 aa9.23□□□□□ -0.93
SVIP-201ENST00000354193 FAM157AC9JC47 383 aa9.23□□□□□ -0.93
SVIP-201ENST00000354193 G3V3Q6 166 aa9.23□□□□□ -0.93
SVIP-201ENST00000354193 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.23□□□□□ -0.93
SVIP-201ENST00000354193 GPR137BO60478 399 aa9.23□□□□□ -0.93
SVIP-201ENST00000354193 AKR1C8PQ5T2L2 129 aa9.23□□□□□ -0.93
SVIP-201ENST00000354193 ZNF709Q8N972 641 aa9.23□□□□□ -0.93
SVIP-201ENST00000354193 PINX1Q96BK5 328 aaKnown RBP9.23□□□□□ -0.93
SVIP-201ENST00000354193 C14orf79Q96F83 325 aa9.23□□□□□ -0.93
SVIP-201ENST00000354193 PCGF1Q9BSM1 259 aa9.23□□□□□ -0.93
SVIP-201ENST00000354193 TUBD1Q9UJT1 453 aa9.23□□□□□ -0.93
SVIP-201ENST00000354193 KIAA1324LA8MWY0 1029 aaPredicted RBP9.23□□□□□ -0.93
SVIP-201ENST00000354193 MMP23AO75900 390 aa9.23□□□□□ -0.93
SVIP-201ENST00000354193 ATG12O94817 140 aa9.23□□□□□ -0.93
SVIP-201ENST00000354193 ADH4P08319 380 aa9.23□□□□□ -0.93
SVIP-201ENST00000354193 GNB2P62879 340 aa9.23□□□□□ -0.93
SVIP-201ENST00000354193 STUMQ69YW2 141 aa9.23□□□□□ -0.93
SVIP-201ENST00000354193 BVESQ8NE79 360 aa9.23□□□□□ -0.93
SVIP-201ENST00000354193 RHOVQ96L33 236 aa9.23□□□□□ -0.93
SVIP-201ENST00000354193 SHARPINQ9H0F6 387 aa9.23□□□□□ -0.93
SVIP-201ENST00000354193 SDHAF2Q9NX18 166 aa9.23□□□□□ -0.93
SVIP-201ENST00000354193 HILPDAQ9Y5L2 63 aa9.23□□□□□ -0.93
SVIP-201ENST00000354193 HECTD1Q9ULT8 2610 aa9.23□□□□□ -0.93
SVIP-201ENST00000354193 A0A0G2JRQ6 117 aa9.23□□□□□ -0.93
SVIP-201ENST00000354193 CD24P25063 80 aa9.23□□□□□ -0.93
SVIP-201ENST00000354193 FAM209AQ5JX71 171 aa9.23□□□□□ -0.93
SVIP-201ENST00000354193 DMRTA2Q96SC8 542 aa9.23□□□□□ -0.93
SVIP-201ENST00000354193 GAL3ST2Q9H3Q3 398 aa9.23□□□□□ -0.93
SVIP-201ENST00000354193 SLC35D1Q9NTN3 355 aa9.23□□□□□ -0.93
SVIP-201ENST00000354193 RFNGQ9Y644 331 aa9.23□□□□□ -0.93
SVIP-201ENST00000354193 IGLV3-9A0A075B6K5 115 aa9.22□□□□□ -0.93
SVIP-201ENST00000354193 SYNGR2O43760 224 aa9.22□□□□□ -0.93
SVIP-201ENST00000354193 DYNLT3P51808 116 aa9.22□□□□□ -0.93
SVIP-201ENST00000354193 IGFBPL1Q8WX77 278 aa9.22□□□□□ -0.93
SVIP-201ENST00000354193 MUC1P15941 1255 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms