RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 RANBP2P49792 3224 aaKnown RBP6.49□□□□□ -1.37
BRCA1-201ENST00000352993 GPM6AP51674 278 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 FBLN7Q53RD9 439 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 FAM19A2Q8N3H0 131 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 TCTEX1D1Q8N7M0 179 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 ORAOV1Q8WV07 137 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 HIPK2Q9H2X6 1198 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 NRN1Q9NPD7 142 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 OR2W1Q9Y3N9 320 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 ABCA7Q8IZY2 2146 aa6.49□□□□□ -1.37
BRCA1-201ENST00000352993 AQP7P3A6NL99 342 aa6.48□□□□□ -1.37
BRCA1-201ENST00000352993 RBFOX2O43251 390 aaKnown RBP eCLIP6.48□□□□□ -1.37
BRCA1-201ENST00000352993 HYPMO75409 117 aa6.48□□□□□ -1.37
BRCA1-201ENST00000352993 NXPH2O95156 264 aa6.48□□□□□ -1.37
BRCA1-201ENST00000352993 IGLV3-1P01715 115 aa6.48□□□□□ -1.37
BRCA1-201ENST00000352993 AARDQ4LEZ3 155 aa6.48□□□□□ -1.37
BRCA1-201ENST00000352993 CENPVQ7Z7K6 275 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-201ENST00000352993 MKXQ8IYA7 352 aa6.48□□□□□ -1.37
BRCA1-201ENST00000352993 OR2M3Q8NG83 312 aa6.48□□□□□ -1.37
BRCA1-201ENST00000352993 TMEM147Q9BVK8 224 aa6.48□□□□□ -1.37
BRCA1-201ENST00000352993 SLC35D1Q9NTN3 355 aa6.48□□□□□ -1.37
BRCA1-201ENST00000352993 FAM186AA6NE01 2351 aa6.48□□□□□ -1.37
BRCA1-201ENST00000352993 TRANK1O15050 2925 aa6.48□□□□□ -1.37
BRCA1-201ENST00000352993 TCL1AP56279 114 aa6.48□□□□□ -1.37
BRCA1-201ENST00000352993 ZNF816Q0VGE8 651 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-201ENST00000352993 FOXL1Q12952 345 aa6.48□□□□□ -1.37
BRCA1-201ENST00000352993 GCSAMLQ5JQS6 135 aa6.48□□□□□ -1.37
BRCA1-201ENST00000352993 LDLRAD2Q5SZI1 272 aa6.48□□□□□ -1.37
BRCA1-201ENST00000352993 TMEM92Q6UXU6 159 aa6.48□□□□□ -1.37
BRCA1-201ENST00000352993 C1orf174Q8IYL3 243 aa6.48□□□□□ -1.37
BRCA1-201ENST00000352993 HS3ST6Q96QI5 342 aa6.48□□□□□ -1.37
BRCA1-201ENST00000352993 COL25A1Q9BXS0 654 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-201ENST00000352993 SLC45A2Q9UMX9 530 aa6.48□□□□□ -1.37
BRCA1-201ENST00000352993 HS3ST3A1Q9Y663 406 aa6.48□□□□□ -1.37
BRCA1-201ENST00000352993 C2orf16Q68DN1 1984 aa6.48□□□□□ -1.37
BRCA1-201ENST00000352993 IGKV1-6A0A0C4DH72 117 aa6.48□□□□□ -1.37
BRCA1-201ENST00000352993 C17orf112F2Z3M2 114 aa6.48□□□□□ -1.37
BRCA1-201ENST00000352993 PDE6DO43924 150 aa6.48□□□□□ -1.37
BRCA1-201ENST00000352993 OR1D5P58170 312 aa6.48□□□□□ -1.37
BRCA1-201ENST00000352993 OR8I2Q8N0Y5 310 aa6.48□□□□□ -1.37
BRCA1-201ENST00000352993 ZNF441Q8N8Z8 693 aa6.48□□□□□ -1.37
BRCA1-201ENST00000352993 APOBEC3DQ96AK3 386 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-201ENST00000352993 ZNF488Q96MN9 340 aa6.48□□□□□ -1.37
BRCA1-201ENST00000352993 LRFN3Q9BTN0 628 aa6.48□□□□□ -1.37
BRCA1-201ENST00000352993 SERTAD4Q9NUC0 356 aa6.48□□□□□ -1.37
BRCA1-201ENST00000352993 OR1A1Q9P1Q5 309 aa6.48□□□□□ -1.37
BRCA1-201ENST00000352993 TP53TG3Q9ULZ0 132 aa6.48□□□□□ -1.37
BRCA1-201ENST00000352993 CHD7Q9P2D1 2997 aa6.48□□□□□ -1.37
BRCA1-201ENST00000352993 PIGBOS1A0A0B4J2F0 54 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 DPRXA6NFQ7 191 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 IGKV1-5P01602 117 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 IGHV3-9P01782 118 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 IGLC2P0DOY2 106 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 IGLC3P0DOY3 106 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 LHX2P50458 406 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 CLDN15P56746 228 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 SSPNQ14714 243 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 KRTCAP3Q53RY4 240 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 C9orf135Q5VTT2 229 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 KMT5CQ86Y97 462 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 ZNF808Q8N4W9 903 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-201ENST00000352993 UHRF2Q96PU4 802 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 RNF114Q9Y508 228 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 ATP23Q9Y6H3 246 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 A0A1B0GX78 115 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 YPEL1O60688 119 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 FRMD6-AS1P0C7T7 363 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 MYF5P13349 255 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 RPL19P84098 196 aaKnown RBP6.47□□□□□ -1.37
BRCA1-201ENST00000352993 MAJINQ3KP22 176 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 LCN12Q6JVE5 192 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 TMEM144Q7Z5S9 345 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 SAXO1Q8IYX7 474 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 OCC1Q8TAD7 63 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 LOXL4Q96JB6 756 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 YPEL2Q96QA6 119 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 QTRT1Q9BXR0 403 aaKnown RBP6.47□□□□□ -1.37
BRCA1-201ENST00000352993 GNB4Q9HAV0 340 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 OBP2AQ9NY56 170 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 COX11Q9Y6N1 276 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 SCO2A0A1W2PP80 73 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 GPX1P07203 203 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 WNT2P09544 360 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 G6PCP35575 357 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 PRDX4Q13162 271 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 Q56UQ5 140 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 STUMQ69YW2 141 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 FGFRL1Q8N441 504 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 AGBL5Q8NDL9 886 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 OR5P3Q8WZ94 311 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 NABP1Q96AH0 204 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 DEFB126Q9BYW3 111 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 ZNF703Q9H7S9 590 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-201ENST00000352993 PRDM6Q9NQX0 595 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 FGF21Q9NSA1 209 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 KNTC1P50748 2209 aa6.47□□□□□ -1.37
BRCA1-201ENST00000352993 YLPM1P49750 1951 aaKnown RBP6.46□□□□□ -1.37
BRCA1-201ENST00000352993 FAM166BA8MTA8 275 aa6.46□□□□□ -1.37
BRCA1-201ENST00000352993 SYNGR4O95473 234 aa6.46□□□□□ -1.37
BRCA1-201ENST00000352993 IGKV1-39P01597 117 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms