RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 OR2T6Q8NHC8 308 aa9.66□□□□□ -0.86
SMARCE1-202ENST00000348513 POM121L2Q96KW2 1035 aa9.66□□□□□ -0.86
SMARCE1-202ENST00000348513 F11RQ9Y624 299 aaKnown RBP9.66□□□□□ -0.86
SMARCE1-202ENST00000348513 CSN3P07498 182 aa9.66□□□□□ -0.86
SMARCE1-202ENST00000348513 C16orf54Q6UWD8 224 aa9.66□□□□□ -0.86
SMARCE1-202ENST00000348513 BHLHA15Q7RTS1 189 aaPredicted RBP9.66□□□□□ -0.86
SMARCE1-202ENST00000348513 ST6GALNAC6Q969X2 333 aa9.66□□□□□ -0.86
SMARCE1-202ENST00000348513 SPSB1Q96BD6 273 aa9.66□□□□□ -0.86
SMARCE1-202ENST00000348513 COL4A1P02462 1669 aa9.66□□□□□ -0.86
SMARCE1-202ENST00000348513 IGHV1-69-2A0A0G2JMI3 117 aa9.65□□□□□ -0.86
SMARCE1-202ENST00000348513 ZNF785A8K8V0 405 aa9.65□□□□□ -0.86
SMARCE1-202ENST00000348513 ATP6V0CP27449 155 aa9.65□□□□□ -0.86
SMARCE1-202ENST00000348513 ADAD2Q8NCV1 583 aaKnown RBP9.65□□□□□ -0.86
SMARCE1-202ENST00000348513 SMIM8Q96KF7 97 aa9.65□□□□□ -0.86
SMARCE1-202ENST00000348513 VSIG4Q9Y279 399 aa9.65□□□□□ -0.86
SMARCE1-202ENST00000348513 LSM2Q9Y333 95 aaKnown RBP9.65□□□□□ -0.86
SMARCE1-202ENST00000348513 TMEM189A5PLL7 270 aa9.65□□□□□ -0.86
SMARCE1-202ENST00000348513 C1QTNF9BB2RNN3 333 aa9.65□□□□□ -0.86
SMARCE1-202ENST00000348513 FAM157AC9JC47 383 aa9.65□□□□□ -0.86
SMARCE1-202ENST00000348513 CD8AP01732 235 aa9.65□□□□□ -0.86
SMARCE1-202ENST00000348513 KRTCAP3Q53RY4 240 aa9.65□□□□□ -0.86
SMARCE1-202ENST00000348513 TMEM70Q9BUB7 260 aa9.65□□□□□ -0.86
SMARCE1-202ENST00000348513 KBTBD11-OT1A0A1B0GTJ5 212 aa9.65□□□□□ -0.86
SMARCE1-202ENST00000348513 TBX6O95947 436 aaPredicted RBP9.65□□□□□ -0.86
SMARCE1-202ENST00000348513 LCN2P80188 198 aa9.65□□□□□ -0.86
SMARCE1-202ENST00000348513 ZAR1Q86SH2 424 aa9.65□□□□□ -0.86
SMARCE1-202ENST00000348513 ST20Q9HBF5 79 aa9.65□□□□□ -0.86
SMARCE1-202ENST00000348513 KIAA1217Q5T5P2 1943 aa9.65□□□□□ -0.86
SMARCE1-202ENST00000348513 A0A1W2PQF6 199 aa9.65□□□□□ -0.86
SMARCE1-202ENST00000348513 ADAM20O43506 726 aa9.65□□□□□ -0.86
SMARCE1-202ENST00000348513 GZMBP10144 247 aa9.65□□□□□ -0.86
SMARCE1-202ENST00000348513 HERVK_113P61574 105 aa9.65□□□□□ -0.86
SMARCE1-202ENST00000348513 VMA21Q3ZAQ7 101 aa9.65□□□□□ -0.86
SMARCE1-202ENST00000348513 OR4C13Q8NGP0 309 aa9.65□□□□□ -0.86
SMARCE1-202ENST00000348513 OR1B1Q8NGR6 318 aa9.65□□□□□ -0.86
SMARCE1-202ENST00000348513 PTX4Q96A99 478 aa9.65□□□□□ -0.86
SMARCE1-202ENST00000348513 NDFIP1Q9BT67 221 aa9.65□□□□□ -0.86
SMARCE1-202ENST00000348513 CEACAM1P13688 526 aa9.65□□□□□ -0.87
SMARCE1-202ENST00000348513 PNLIPP16233 465 aa9.65□□□□□ -0.87
SMARCE1-202ENST00000348513 OR4D11Q8NGI4 311 aa9.65□□□□□ -0.87
SMARCE1-202ENST00000348513 APOBEC4Q8WW27 367 aaKnown RBP9.65□□□□□ -0.87
SMARCE1-202ENST00000348513 ICAM5Q9UMF0 924 aa9.65□□□□□ -0.87
SMARCE1-202ENST00000348513 TRAV8-2A0A0B4J237 113 aa9.64□□□□□ -0.87
SMARCE1-202ENST00000348513 LINC00869P0C866 280 aa9.64□□□□□ -0.87
SMARCE1-202ENST00000348513 PSG6Q00889 435 aa9.64□□□□□ -0.87
SMARCE1-202ENST00000348513 MAP1BP46821 2468 aaKnown RBP9.64□□□□□ -0.87
SMARCE1-202ENST00000348513 TRAV9-2A0A087WT02 112 aa9.64□□□□□ -0.87
SMARCE1-202ENST00000348513 TRAV8-4A0A0B4J246 113 aa9.64□□□□□ -0.87
SMARCE1-202ENST00000348513 OPRK1P41145 380 aa9.64□□□□□ -0.87
SMARCE1-202ENST00000348513 KLHDC3Q9BQ90 382 aa9.64□□□□□ -0.87
SMARCE1-202ENST00000348513 PAGE4O60829 102 aa9.64□□□□□ -0.87
SMARCE1-202ENST00000348513 PEBP1P30086 187 aaKnown RBP9.64□□□□□ -0.87
SMARCE1-202ENST00000348513 RPS4XP62701 263 aaKnown RBP9.64□□□□□ -0.87
SMARCE1-202ENST00000348513 FUT5Q11128 374 aa9.64□□□□□ -0.87
SMARCE1-202ENST00000348513 Q8IYB0 196 aa9.64□□□□□ -0.87
SMARCE1-202ENST00000348513 OR8B12Q8NGG6 310 aa9.64□□□□□ -0.87
SMARCE1-202ENST00000348513 OR10AC1Q8NH08 325 aa9.64□□□□□ -0.87
SMARCE1-202ENST00000348513 UCN2Q96RP3 112 aa9.64□□□□□ -0.87
SMARCE1-202ENST00000348513 BRWD1Q9NSI6 2320 aa9.64□□□□□ -0.87
SMARCE1-202ENST00000348513 LAMB2P55268 1798 aa9.64□□□□□ -0.87
SMARCE1-202ENST00000348513 A0A1W2PPV9 198 aa9.64□□□□□ -0.87
SMARCE1-202ENST00000348513 ACSF3Q4G176 576 aaPredicted RBP9.64□□□□□ -0.87
SMARCE1-202ENST00000348513 FDX2Q6P4F2 183 aa9.64□□□□□ -0.87
SMARCE1-202ENST00000348513 FER1L6-AS1Q8NA97 138 aa9.64□□□□□ -0.87
SMARCE1-202ENST00000348513 PRR13Q9NZ81 148 aa9.64□□□□□ -0.87
SMARCE1-202ENST00000348513 ZNHIT1O43257 154 aa9.64□□□□□ -0.87
SMARCE1-202ENST00000348513 SRSF10O75494 262 aaKnown RBP9.64□□□□□ -0.87
SMARCE1-202ENST00000348513 CEACAM8P31997 349 aaPredicted RBP9.64□□□□□ -0.87
SMARCE1-202ENST00000348513 TMPRSS3P57727 454 aa9.64□□□□□ -0.87
SMARCE1-202ENST00000348513 GAGE5Q13069 117 aa9.64□□□□□ -0.87
SMARCE1-202ENST00000348513 GAGE6Q13070 117 aa9.64□□□□□ -0.87
SMARCE1-202ENST00000348513 TMEM211Q6ICI0 200 aa9.64□□□□□ -0.87
SMARCE1-202ENST00000348513 MRPS18BQ9Y676 258 aaKnown RBP9.64□□□□□ -0.87
SMARCE1-202ENST00000348513 ODAMA1E959 279 aa9.63□□□□□ -0.87
SMARCE1-202ENST00000348513 SMIM20Q8N5G0 67 aa9.63□□□□□ -0.87
SMARCE1-202ENST00000348513 GVQW1Q8N7I0 195 aa9.63□□□□□ -0.87
SMARCE1-202ENST00000348513 TMEM116Q8NCL8 245 aa9.63□□□□□ -0.87
SMARCE1-202ENST00000348513 RPS4Y2Q8TD47 263 aa9.63□□□□□ -0.87
SMARCE1-202ENST00000348513 COPS9Q8WXC6 57 aa9.63□□□□□ -0.87
SMARCE1-202ENST00000348513 MARS2Q96GW9 593 aaKnown RBP9.63□□□□□ -0.87
SMARCE1-202ENST00000348513 POLR2AP24928 1970 aaKnown RBP9.63□□□□□ -0.87
SMARCE1-202ENST00000348513 PPIAL4DF5H284 164 aa9.63□□□□□ -0.87
SMARCE1-202ENST00000348513 CDX4O14627 284 aaPredicted RBP9.63□□□□□ -0.87
SMARCE1-202ENST00000348513 TMPRSS2O15393 492 aa9.63□□□□□ -0.87
SMARCE1-202ENST00000348513 RTP5Q14D33 572 aa9.63□□□□□ -0.87
SMARCE1-202ENST00000348513 VSTM2LQ96N03 204 aa9.63□□□□□ -0.87
SMARCE1-202ENST00000348513 RP1L1Q8IWN7 2480 aaPredicted RBP9.63□□□□□ -0.87
SMARCE1-202ENST00000348513 UBR3Q6ZT12 1888 aa9.63□□□□□ -0.87
SMARCE1-202ENST00000348513 IGHV4-34P06331 123 aa9.63□□□□□ -0.87
SMARCE1-202ENST00000348513 CD3EP07766 207 aa9.63□□□□□ -0.87
SMARCE1-202ENST00000348513 SRIP30626 198 aa9.63□□□□□ -0.87
SMARCE1-202ENST00000348513 SLC35E4Q6ICL7 350 aa9.63□□□□□ -0.87
SMARCE1-202ENST00000348513 TMEM52Q8NDY8 209 aa9.63□□□□□ -0.87
SMARCE1-202ENST00000348513 DUSP15Q9H1R2 295 aaPredicted RBP9.63□□□□□ -0.87
SMARCE1-202ENST00000348513 COL4A5P29400 1685 aa9.63□□□□□ -0.87
SMARCE1-202ENST00000348513 ABCA3Q99758 1704 aa9.63□□□□□ -0.87
SMARCE1-202ENST00000348513 TRIP12Q14669 1992 aaPredicted RBP9.63□□□□□ -0.87
SMARCE1-202ENST00000348513 RAMP1O60894 148 aa9.63□□□□□ -0.87
SMARCE1-202ENST00000348513 LIMS1P48059 325 aa9.63□□□□□ -0.87
SMARCE1-202ENST00000348513 SAMD5Q5TGI4 173 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms